EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFDAG00000008291 (Gene tree)
Gene ID
104867170
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Fukomys_damarensis
Status
putative
Strand
Plus strand
Length
21699 bases
Position
chrKN122459.1:5087694-5109392
Accession
104867170
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFDAP00000020637PABPPF00658.186.1e-2611
ENSFDAP00000020637RRM_5PF13893.66.8e-1211
ENSFDAP00000020637RRM_1PF00076.222.2e-8814
ENSFDAP00000020637RRM_1PF00076.222.2e-8824
ENSFDAP00000020637RRM_1PF00076.222.2e-8834
ENSFDAP00000020637RRM_1PF00076.222.2e-8844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFDAT00000011688PABPC1L-2011785XM_010631475ENSFDAP00000020637594 (aa)XP_010629777-
Gene Model
Click here to download ENSFDAG00000008291's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000008291's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFDAG00000008291PABPC1L9861.093ENSFDAG00000018480PABPC39861.066
ENSFDAG00000008291PABPC1L6530.526ENSFDAG00000021259ELAVL19830.526
ENSFDAG00000008291PABPC1L5830.409ENSFDAG00000003933TIAL19330.409
ENSFDAG00000008291PABPC1L6130.811ENSFDAG00000010169RBM285730.811
ENSFDAG00000008291PABPC1L6361.708ENSFDAG00000019606PABPC4L9861.708
ENSFDAG00000008291PABPC1L6333.735ENSFDAG00000018820ELAVL29933.735
ENSFDAG00000008291PABPC1L5838.889ENSFDAG00000007943-5237.500
ENSFDAG00000008291PABPC1L8839.785ENSFDAG00000010581-9738.028
ENSFDAG00000008291PABPC1L9862.133ENSFDAG00000020016-9861.705
ENSFDAG00000008291PABPC1L6359.270ENSFDAG00000000126PABPC59558.953
ENSFDAG00000008291PABPC1L6270.558ENSFDAG00000005484-9970.558
ENSFDAG00000008291PABPC1L6035.294ENSFDAG00000011452CELF37434.343
ENSFDAG00000008291PABPC1L5930.323ENSFDAG00000021342-5930.323
ENSFDAG00000008291PABPC1L5536.047ENSFDAG00000015074CELF26236.047
ENSFDAG00000008291PABPC1L6135.450ENSFDAG00000009286SF3B45435.979
ENSFDAG00000008291PABPC1L9864.991ENSFDAG00000005583PABPC19764.632
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFDAG00000008291PABPC1L10082.276ENSG00000101104PABPC1L9990.432Homo_sapiens
ENSFDAG00000008291PABPC1L9863.430ENSAPOG00000010842pabpc1l9863.948Acanthochromis_polyacanthus
ENSFDAG00000008291PABPC1L8588.915ENSAMEG00000004099PABPC1L8385.177Ailuropoda_melanoleuca
ENSFDAG00000008291PABPC1L9964.763ENSACIG00000021004-9964.763Amphilophus_citrinellus
ENSFDAG00000008291PABPC1L9863.082ENSAOCG00000006167-9962.921Amphiprion_ocellaris
ENSFDAG00000008291PABPC1L9864.648ENSAPEG00000010558-9777.228Amphiprion_percula
ENSFDAG00000008291PABPC1L9964.706ENSATEG00000007428pabpc1l9965.196Anabas_testudineus
ENSFDAG00000008291PABPC1L9870.261ENSAPLG00000008415PABPC1L9870.521Anas_platyrhynchos
ENSFDAG00000008291PABPC1L9969.071ENSACAG00000011841PABPC1L9869.071Anolis_carolinensis
ENSFDAG00000008291PABPC1L10080.000ENSANAG00000026826PABPC1L10080.000Aotus_nancymaae
ENSFDAG00000008291PABPC1L9963.200ENSACLG00000024791pabpc1l9963.200Astatotilapia_calliptera
ENSFDAG00000008291PABPC1L9965.974ENSAMXG00000013552pabpc1l9965.760Astyanax_mexicanus
ENSFDAG00000008291PABPC1L5793.452ENSBTAG00000055300-10093.452Bos_taurus
ENSFDAG00000008291PABPC1L6973.498ENSBTAG00000016849PABPC1L7481.224Bos_taurus
ENSFDAG00000008291PABPC1L6174.713ENSCJAG00000038506-10074.713Callithrix_jacchus
ENSFDAG00000008291PABPC1L10080.389ENSCJAG00000017628PABPC1L10080.488Callithrix_jacchus
ENSFDAG00000008291PABPC1L9872.111ENSCAFG00000009573PABPC1L10071.957Canis_familiaris
ENSFDAG00000008291PABPC1L9980.519ENSCAFG00020013828PABPC1L9980.519Canis_lupus_dingo
ENSFDAG00000008291PABPC1L9780.034ENSCHIG00000025759PABPC1L9180.034Capra_hircus
ENSFDAG00000008291PABPC1L10078.537ENSTSYG00000006645PABPC1L10078.537Carlito_syrichta
ENSFDAG00000008291PABPC1L9984.954ENSCAPG00000014519PABPC1L10083.670Cavia_aperea
ENSFDAG00000008291PABPC1L10088.835ENSCPOG00000013633PABPC1L10087.702Cavia_porcellus
ENSFDAG00000008291PABPC1L10080.325ENSCCAG00000023338PABPC1L10080.325Cebus_capucinus
ENSFDAG00000008291PABPC1L10082.114ENSCATG00000034065PABPC1L10082.276Cercocebus_atys
ENSFDAG00000008291PABPC1L10088.188ENSCLAG00000005298PABPC1L10088.511Chinchilla_lanigera
ENSFDAG00000008291PABPC1L10082.114ENSCSAG00000014242PABPC1L10082.276Chlorocebus_sabaeus
ENSFDAG00000008291PABPC1L5578.788ENSCPBG00000007810-8378.788Chrysemys_picta_bellii
ENSFDAG00000008291PABPC1L7579.233ENSCPBG00000017755-9979.233Chrysemys_picta_bellii
ENSFDAG00000008291PABPC1L9747.896ENSCING00000002796-9747.129Ciona_intestinalis
ENSFDAG00000008291PABPC1L9757.216ENSCSAVG00000003102-10078.767Ciona_savignyi
ENSFDAG00000008291PABPC1L9765.714ENSCSAVG00000004246-9659.184Ciona_savignyi
ENSFDAG00000008291PABPC1L10079.608ENSCANG00000037530PABPC1L10079.608Colobus_angolensis_palliatus
ENSFDAG00000008291PABPC1L9974.230ENSCGRG00001021938Pabpc1l9974.230Cricetulus_griseus_chok1gshd
ENSFDAG00000008291PABPC1L9974.230ENSCGRG00000007946Pabpc1l9974.230Cricetulus_griseus_crigri
ENSFDAG00000008291PABPC1L9964.615ENSCSEG00000021295pabpc1l9964.615Cynoglossus_semilaevis
ENSFDAG00000008291PABPC1L9965.957ENSCVAG00000015943-8681.679Cyprinodon_variegatus
ENSFDAG00000008291PABPC1L9966.453ENSDARG00000002597pabpc1l8883.846Danio_rerio
ENSFDAG00000008291PABPC1L9982.085ENSDNOG00000048450PABPC1L9982.085Dasypus_novemcinctus
ENSFDAG00000008291PABPC1L10081.626ENSDORG00000001067Pabpc1l10081.626Dipodomys_ordii
ENSFDAG00000008291PABPC1L9586.585ENSETEG00000009969PABPC1L7386.585Echinops_telfairi
ENSFDAG00000008291PABPC1L5680.000ENSEASG00005023407-7380.000Equus_asinus_asinus
ENSFDAG00000008291PABPC1L5893.452ENSEASG00005023408-10093.452Equus_asinus_asinus
ENSFDAG00000008291PABPC1L7080.080ENSECAG00000040139-8780.972Equus_caballus
ENSFDAG00000008291PABPC1L10077.850ENSEEUG00000005978PABPC1L10077.850Erinaceus_europaeus
ENSFDAG00000008291PABPC1L9967.007ENSELUG00000001811pabpc1l9967.177Esox_lucius
ENSFDAG00000008291PABPC1L9981.301ENSFCAG00000011692PABPC1L9981.301Felis_catus
ENSFDAG00000008291PABPC1L8175.356ENSFALG00000005372PABPC1L8275.153Ficedula_albicollis
ENSFDAG00000008291PABPC1L9966.016ENSFHEG00000003398pabpc1l9965.798Fundulus_heteroclitus
ENSFDAG00000008291PABPC1L9966.124ENSGMOG00000004437pabpc1l9865.957Gadus_morhua
ENSFDAG00000008291PABPC1L9871.530ENSGALG00000004123PABPC1L9980.576Gallus_gallus
ENSFDAG00000008291PABPC1L9962.154ENSGAFG00000021057pabpc1l9961.846Gambusia_affinis
ENSFDAG00000008291PABPC1L9962.761ENSGACG00000002792pabpc1l9962.600Gasterosteus_aculeatus
ENSFDAG00000008291PABPC1L9970.947ENSGAGG00000000589PABPC1L9870.947Gopherus_agassizii
ENSFDAG00000008291PABPC1L10082.114ENSGGOG00000004584PABPC1L10082.276Gorilla_gorilla
ENSFDAG00000008291PABPC1L9964.815ENSHBUG00000006134pabpc1l9964.815Haplochromis_burtoni
ENSFDAG00000008291PABPC1L10091.517ENSHGLG00000008434PABPC1L10092.170Heterocephalus_glaber_female
ENSFDAG00000008291PABPC1L10091.517ENSHGLG00100012151PABPC1L10092.170Heterocephalus_glaber_male
ENSFDAG00000008291PABPC1L6279.213ENSHGLG00100019506-10079.213Heterocephalus_glaber_male
ENSFDAG00000008291PABPC1L9865.928ENSHCOG00000009270pabpc1l9966.269Hippocampus_comes
ENSFDAG00000008291PABPC1L9968.421ENSIPUG00000012602pabpc1l9968.421Ictalurus_punctatus
ENSFDAG00000008291PABPC1L6259.195ENSIPUG00000006760-8859.195Ictalurus_punctatus
ENSFDAG00000008291PABPC1L6259.770ENSIPUG00000006780-8559.770Ictalurus_punctatus
ENSFDAG00000008291PABPC1L10083.468ENSSTOG00000003739PABPC1L10083.468Ictidomys_tridecemlineatus
ENSFDAG00000008291PABPC1L9966.062ENSJJAG00000022406Pabpc1l9963.695Jaculus_jaculus
ENSFDAG00000008291PABPC1L9965.366ENSKMAG00000016847pabpc1l9965.366Kryptolebias_marmoratus
ENSFDAG00000008291PABPC1L9963.360ENSLBEG00000010084pabpc1l9963.360Labrus_bergylta
ENSFDAG00000008291PABPC1L9965.238ENSLACG00000005762PABPC1L9865.079Latimeria_chalumnae
ENSFDAG00000008291PABPC1L9967.200ENSLOCG00000007519pabpc1l9867.040Lepisosteus_oculatus
ENSFDAG00000008291PABPC1L9979.040ENSLAFG00000003553PABPC1L10079.040Loxodonta_africana
ENSFDAG00000008291PABPC1L10082.114ENSMFAG00000040365PABPC1L10082.276Macaca_fascicularis
ENSFDAG00000008291PABPC1L10080.065ENSMNEG00000032298PABPC1L10080.227Macaca_nemestrina
ENSFDAG00000008291PABPC1L10082.114ENSMLEG00000043139PABPC1L10082.276Mandrillus_leucophaeus
ENSFDAG00000008291PABPC1L9763.953ENSMAMG00000011854pabpc1l9763.621Mastacembelus_armatus
ENSFDAG00000008291PABPC1L9963.200ENSMZEG00005023713pabpc1l9963.200Maylandia_zebra
ENSFDAG00000008291PABPC1L9970.880ENSMGAG00000003674PABPC1L9870.880Meleagris_gallopavo
ENSFDAG00000008291PABPC1L9972.876ENSMOCG00000013186Pabpc1l9972.876Microtus_ochrogaster
ENSFDAG00000008291PABPC1L9965.306ENSMMOG00000020574-9082.308Mola_mola
ENSFDAG00000008291PABPC1L9473.529ENSMODG00000016198PABPC1L9973.613Monodelphis_domestica
ENSFDAG00000008291PABPC1L9959.726ENSMALG00000021622pabpc1l10062.171Monopterus_albus
ENSFDAG00000008291PABPC1L9973.736MGP_CAROLIEiJ_G0024627Pabpc1l9973.736Mus_caroli
ENSFDAG00000008291PABPC1L9973.409ENSMUSG00000054582Pabpc1l9973.409Mus_musculus
ENSFDAG00000008291PABPC1L9973.941MGP_PahariEiJ_G0026071Pabpc1l9973.941Mus_pahari
ENSFDAG00000008291PABPC1L9973.573MGP_SPRETEiJ_G0025549Pabpc1l9973.573Mus_spretus
ENSFDAG00000008291PABPC1L9980.227ENSMPUG00000017646PABPC1L9980.227Mustela_putorius_furo
ENSFDAG00000008291PABPC1L9874.074ENSMLUG00000006324PABPC1L9774.074Myotis_lucifugus
ENSFDAG00000008291PABPC1L10076.823ENSNGAG00000010458Pabpc1l10076.823Nannospalax_galili
ENSFDAG00000008291PABPC1L9963.710ENSNBRG00000016633pabpc1l9963.710Neolamprologus_brichardi
ENSFDAG00000008291PABPC1L10066.069ENSMEUG00000007905-10066.069Notamacropus_eugenii
ENSFDAG00000008291PABPC1L10079.708ENSOPRG00000011846PABPC1L10079.708Ochotona_princeps
ENSFDAG00000008291PABPC1L10080.198ENSODEG00000015482PABPC1L10080.198Octodon_degus
ENSFDAG00000008291PABPC1L5975.163ENSODEG00000002920-9275.163Octodon_degus
ENSFDAG00000008291PABPC1L9963.200ENSONIG00000017314pabpc1l9963.200Oreochromis_niloticus
ENSFDAG00000008291PABPC1L8964.982ENSOANG00000015793-10064.982Ornithorhynchus_anatinus
ENSFDAG00000008291PABPC1L9974.730ENSOCUG00000003005PABPC1L10075.809Oryctolagus_cuniculus
ENSFDAG00000008291PABPC1L9970.813ENSORLG00000010322pabpc1l9970.813Oryzias_latipes
ENSFDAG00000008291PABPC1L9970.813ENSORLG00020021193pabpc1l9970.813Oryzias_latipes_hni
ENSFDAG00000008291PABPC1L9970.813ENSORLG00015017018pabpc1l9970.813Oryzias_latipes_hsok
ENSFDAG00000008291PABPC1L9960.611ENSOMEG00000010789pabpc1l9960.398Oryzias_melastigma
ENSFDAG00000008291PABPC1L9979.107ENSOGAG00000032999PABPC1L10079.107Otolemur_garnettii
ENSFDAG00000008291PABPC1L9980.656ENSOARG00000004578PABPC1L9980.492Ovis_aries
ENSFDAG00000008291PABPC1L10082.114ENSPPAG00000039677PABPC1L10082.114Pan_paniscus
ENSFDAG00000008291PABPC1L6578.395ENSPPRG00000019327-9878.395Panthera_pardus
ENSFDAG00000008291PABPC1L9982.013ENSPTIG00000006524PABPC1L9982.013Panthera_tigris_altaica
ENSFDAG00000008291PABPC1L6590.123ENSPTRG00000013531PABPC1L9990.123Pan_troglodytes
ENSFDAG00000008291PABPC1L10082.114ENSPANG00000018788PABPC1L10082.276Papio_anubis
ENSFDAG00000008291PABPC1L9966.720ENSPKIG00000007322pabpc1l9966.559Paramormyrops_kingsleyae
ENSFDAG00000008291PABPC1L5579.231ENSPKIG00000016810-9379.231Paramormyrops_kingsleyae
ENSFDAG00000008291PABPC1L7079.856ENSPSIG00000013289PABPC1L9979.856Pelodiscus_sinensis
ENSFDAG00000008291PABPC1L7465.128ENSPMGG00000023121-9065.128Periophthalmus_magnuspinnatus
ENSFDAG00000008291PABPC1L6374.419ENSPMGG00000023117pabpc1l9281.061Periophthalmus_magnuspinnatus
ENSFDAG00000008291PABPC1L9973.563ENSPEMG00000020671Pabpc1l9973.892Peromyscus_maniculatus_bairdii
ENSFDAG00000008291PABPC1L9966.557ENSPFOG00000013241pabpc1l9965.210Poecilia_formosa
ENSFDAG00000008291PABPC1L9967.632ENSPLAG00000017490-9967.632Poecilia_latipinna
ENSFDAG00000008291PABPC1L9965.478ENSPMEG00000007677pabpc1l9965.154Poecilia_mexicana
ENSFDAG00000008291PABPC1L6874.877ENSPREG00000015886pabpc1l9974.877Poecilia_reticulata
ENSFDAG00000008291PABPC1L10082.114ENSPPYG00000011042PABPC1L10082.439Pongo_abelii
ENSFDAG00000008291PABPC1L6485.938ENSPCAG00000011787-7585.938Procavia_capensis
ENSFDAG00000008291PABPC1L9981.414ENSPCOG00000020630PABPC1L9981.414Propithecus_coquereli
ENSFDAG00000008291PABPC1L9978.176ENSPVAG00000012663PABPC1L10078.176Pteropus_vampyrus
ENSFDAG00000008291PABPC1L9963.484ENSPNYG00000004101pabpc1l9963.484Pundamilia_nyererei
ENSFDAG00000008291PABPC1L9961.022ENSPNAG00000021248pabpc1l9961.120Pygocentrus_nattereri
ENSFDAG00000008291PABPC1L9971.910ENSRNOG00000012750Pabpc1l10073.301Rattus_norvegicus
ENSFDAG00000008291PABPC1L10081.951ENSRBIG00000035381PABPC1L10081.951Rhinopithecus_bieti
ENSFDAG00000008291PABPC1L10081.626ENSRROG00000044498PABPC1L10081.626Rhinopithecus_roxellana
ENSFDAG00000008291PABPC1L10079.741ENSSBOG00000009532-10079.741Saimiri_boliviensis_boliviensis
ENSFDAG00000008291PABPC1L9868.519ENSSHAG00000011446PABPC1L10068.519Sarcophilus_harrisii
ENSFDAG00000008291PABPC1L9967.520ENSSFOG00015017304pabpc1l9967.308Scleropages_formosus
ENSFDAG00000008291PABPC1L9964.286ENSSMAG00000010516pabpc1l9882.171Scophthalmus_maximus
ENSFDAG00000008291PABPC1L9965.154ENSSDUG00000014743pabpc1l9964.887Seriola_dumerili
ENSFDAG00000008291PABPC1L9963.345ENSSLDG00000006981pabpc1l9576.555Seriola_lalandi_dorsalis
ENSFDAG00000008291PABPC1L9968.750ENSSPUG00000004233PABPC1L9868.750Sphenodon_punctatus
ENSFDAG00000008291PABPC1L9865.128ENSSPAG00000017137pabpc1l9965.128Stegastes_partitus
ENSFDAG00000008291PABPC1L9979.538ENSSSCG00000007382PABPC1L9979.538Sus_scrofa
ENSFDAG00000008291PABPC1L9969.620ENSTGUG00000005114PABPC1L9969.620Taeniopygia_guttata
ENSFDAG00000008291PABPC1L9664.803ENSTRUG00000011085pabpc1l9764.145Takifugu_rubripes
ENSFDAG00000008291PABPC1L9962.019ENSTNIG00000017903pabpc1l9861.538Tetraodon_nigroviridis
ENSFDAG00000008291PABPC1L9489.726ENSTBEG00000002851PABPC1L8089.726Tupaia_belangeri
ENSFDAG00000008291PABPC1L9477.296ENSTTRG00000007618PABPC1L10077.403Tursiops_truncatus
ENSFDAG00000008291PABPC1L9985.254ENSUAMG00000017682PABPC1L9985.254Ursus_americanus
ENSFDAG00000008291PABPC1L7187.805ENSUMAG00000025436PABPC1L9487.805Ursus_maritimus
ENSFDAG00000008291PABPC1L9989.723ENSVVUG00000018939PABPC1L9989.723Vulpes_vulpes
ENSFDAG00000008291PABPC1L9965.329ENSXETG00000022831pabpc1l9865.273Xenopus_tropicalis
ENSFDAG00000008291PABPC1L9965.850ENSXCOG00000005459pabpc1l9978.723Xiphophorus_couchianus
ENSFDAG00000008291PABPC1L9967.517ENSXMAG00000017135pabpc1l9967.517Xiphophorus_maculatus

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