EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000008347 (Gene tree)
Gene ID: 104877187
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 5213 bases
Position: chrKN123629.1:9696894-9702106
Accession: 104877187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000020571	RRM_1	PF00076.22	8.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000011756	SLIRP-201	431	XM_010645585	ENSFDAP00000020571	113 (aa)	XP_010643887	UPI0005402F3A

Gene Model

Click here to download ENSFDAG00000008347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000008347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000008347	SLIRP	79	68.539	ENSG00000119705	SLIRP	95	73.611	Homo_sapiens
ENSFDAG00000008347	SLIRP	65	56.757	ENSAPOG00000001298	slirp	74	56.757	Acanthochromis_polyacanthus
ENSFDAG00000008347	SLIRP	85	68.750	ENSAMEG00000003975	SLIRP	100	68.750	Ailuropoda_melanoleuca
ENSFDAG00000008347	SLIRP	77	54.023	ENSACIG00000023083	slirp	84	54.023	Amphilophus_citrinellus
ENSFDAG00000008347	SLIRP	76	55.814	ENSAOCG00000006342	slirp	86	55.814	Amphiprion_ocellaris
ENSFDAG00000008347	SLIRP	76	55.814	ENSAPEG00000015917	slirp	86	55.814	Amphiprion_percula
ENSFDAG00000008347	SLIRP	77	55.172	ENSAPEG00000015719	-	88	55.172	Amphiprion_percula
ENSFDAG00000008347	SLIRP	68	53.247	ENSATEG00000013525	slirp	77	53.247	Anabas_testudineus
ENSFDAG00000008347	SLIRP	69	58.974	ENSAMXG00000018693	slirp	78	58.974	Astyanax_mexicanus
ENSFDAG00000008347	SLIRP	93	70.476	ENSCJAG00000016946	SLIRP	96	71.277	Callithrix_jacchus
ENSFDAG00000008347	SLIRP	100	67.257	ENSCAFG00020015876	-	97	67.257	Canis_lupus_dingo
ENSFDAG00000008347	SLIRP	100	68.142	ENSCCAG00000030130	SLIRP	97	68.142	Cebus_capucinus
ENSFDAG00000008347	SLIRP	100	61.062	ENSCATG00000036327	SLIRP	96	67.021	Cercocebus_atys
ENSFDAG00000008347	SLIRP	86	61.856	ENSCSAG00000011736	SLIRP	99	61.947	Chlorocebus_sabaeus
ENSFDAG00000008347	SLIRP	83	46.809	ENSCPBG00000026327	SLIRP	90	46.809	Chrysemys_picta_bellii
ENSFDAG00000008347	SLIRP	62	74.286	ENSCANG00000032892	SLIRP	91	67.021	Colobus_angolensis_palliatus
ENSFDAG00000008347	SLIRP	96	62.385	ENSCGRG00001024068	Slirp	97	62.385	Cricetulus_griseus_chok1gshd
ENSFDAG00000008347	SLIRP	96	62.385	ENSCGRG00000017440	Slirp	97	62.385	Cricetulus_griseus_crigri
ENSFDAG00000008347	SLIRP	63	60.563	ENSCSEG00000015766	slirp	72	60.563	Cynoglossus_semilaevis
ENSFDAG00000008347	SLIRP	71	52.500	ENSCVAG00000012504	slirp	76	52.500	Cyprinodon_variegatus
ENSFDAG00000008347	SLIRP	67	53.947	ENSDARG00000097753	slirp	86	50.549	Danio_rerio
ENSFDAG00000008347	SLIRP	78	70.455	ENSDNOG00000007721	SLIRP	97	62.832	Dasypus_novemcinctus
ENSFDAG00000008347	SLIRP	94	73.585	ENSDORG00000012379	Slirp	95	73.585	Dipodomys_ordii
ENSFDAG00000008347	SLIRP	86	62.887	ENSETEG00000010345	SLIRP	95	61.321	Echinops_telfairi
ENSFDAG00000008347	SLIRP	100	76.106	ENSEASG00005020193	SLIRP	97	76.106	Equus_asinus_asinus
ENSFDAG00000008347	SLIRP	87	63.265	ENSEEUG00000007257	SLIRP	96	63.265	Erinaceus_europaeus
ENSFDAG00000008347	SLIRP	76	52.326	ENSELUG00000016800	slirp	84	52.326	Esox_lucius
ENSFDAG00000008347	SLIRP	83	74.468	ENSFCAG00000036326	SLIRP	91	74.468	Felis_catus
ENSFDAG00000008347	SLIRP	63	47.887	ENSFALG00000012583	SLIRP	69	47.945	Ficedula_albicollis
ENSFDAG00000008347	SLIRP	66	53.333	ENSFHEG00000004709	slirp	79	53.333	Fundulus_heteroclitus
ENSFDAG00000008347	SLIRP	77	49.425	ENSGMOG00000016948	slirp	83	49.425	Gadus_morhua
ENSFDAG00000008347	SLIRP	67	48.684	ENSGALG00000031238	SLIRP	77	48.684	Gallus_gallus
ENSFDAG00000008347	SLIRP	66	54.667	ENSGAFG00000010998	slirp	75	54.667	Gambusia_affinis
ENSFDAG00000008347	SLIRP	63	54.930	ENSGACG00000020137	slirp	83	54.930	Gasterosteus_aculeatus
ENSFDAG00000008347	SLIRP	75	51.765	ENSGAGG00000009953	SLIRP	59	51.765	Gopherus_agassizii
ENSFDAG00000008347	SLIRP	79	68.539	ENSGGOG00000011059	-	96	67.021	Gorilla_gorilla
ENSFDAG00000008347	SLIRP	100	76.106	ENSHGLG00000018491	SLIRP	97	76.106	Heterocephalus_glaber_female
ENSFDAG00000008347	SLIRP	100	76.106	ENSHGLG00100014153	SLIRP	97	76.106	Heterocephalus_glaber_male
ENSFDAG00000008347	SLIRP	63	59.155	ENSHCOG00000006795	slirp	72	59.155	Hippocampus_comes
ENSFDAG00000008347	SLIRP	76	47.727	ENSIPUG00000010214	SLIRP	88	47.727	Ictalurus_punctatus
ENSFDAG00000008347	SLIRP	86	76.289	ENSSTOG00000034316	SLIRP	97	74.336	Ictidomys_tridecemlineatus
ENSFDAG00000008347	SLIRP	76	47.826	ENSKMAG00000002038	slirp	88	47.826	Kryptolebias_marmoratus
ENSFDAG00000008347	SLIRP	77	50.575	ENSLBEG00000007564	slirp	85	50.575	Labrus_bergylta
ENSFDAG00000008347	SLIRP	76	51.163	ENSLACG00000013434	SLIRP	82	51.163	Latimeria_chalumnae
ENSFDAG00000008347	SLIRP	86	60.825	ENSMFAG00000042960	SLIRP	96	64.894	Macaca_fascicularis
ENSFDAG00000008347	SLIRP	86	59.794	ENSMMUG00000029256	SLIRP	96	65.957	Macaca_mulatta
ENSFDAG00000008347	SLIRP	86	60.825	ENSMNEG00000028921	SLIRP	96	64.894	Macaca_nemestrina
ENSFDAG00000008347	SLIRP	83	67.021	ENSMLEG00000043644	SLIRP	91	67.021	Mandrillus_leucophaeus
ENSFDAG00000008347	SLIRP	77	56.322	ENSMZEG00005004617	slirp	86	56.322	Maylandia_zebra
ENSFDAG00000008347	SLIRP	100	66.372	ENSMAUG00000003857	Slirp	97	66.372	Mesocricetus_auratus
ENSFDAG00000008347	SLIRP	98	64.865	ENSMICG00000012080	SLIRP	95	64.865	Microcebus_murinus
ENSFDAG00000008347	SLIRP	96	66.972	ENSMOCG00000016019	Slirp	98	67.000	Microtus_ochrogaster
ENSFDAG00000008347	SLIRP	77	52.874	ENSMMOG00000018268	slirp	85	52.874	Mola_mola
ENSFDAG00000008347	SLIRP	62	70.000	ENSMODG00000005207	-	99	70.000	Monodelphis_domestica
ENSFDAG00000008347	SLIRP	77	47.126	ENSMALG00000012581	slirp	89	47.126	Monopterus_albus
ENSFDAG00000008347	SLIRP	90	68.627	MGP_CAROLIEiJ_G0017995	Slirp	94	68.627	Mus_caroli
ENSFDAG00000008347	SLIRP	90	69.608	ENSMUSG00000021040	Slirp	91	69.608	Mus_musculus
ENSFDAG00000008347	SLIRP	90	69.608	MGP_SPRETEiJ_G0018840	Slirp	91	69.608	Mus_spretus
ENSFDAG00000008347	SLIRP	86	77.320	ENSMLUG00000029544	-	97	73.451	Myotis_lucifugus
ENSFDAG00000008347	SLIRP	79	78.652	ENSMLUG00000024998	-	97	71.681	Myotis_lucifugus
ENSFDAG00000008347	SLIRP	89	67.961	ENSNGAG00000016363	Slirp	99	67.961	Nannospalax_galili
ENSFDAG00000008347	SLIRP	87	61.224	ENSNLEG00000027238	-	91	64.557	Nomascus_leucogenys
ENSFDAG00000008347	SLIRP	100	60.177	ENSNLEG00000032459	-	95	63.441	Nomascus_leucogenys
ENSFDAG00000008347	SLIRP	100	74.336	ENSODEG00000012580	SLIRP	99	72.917	Octodon_degus
ENSFDAG00000008347	SLIRP	77	57.471	ENSONIG00000011692	slirp	86	57.471	Oreochromis_niloticus
ENSFDAG00000008347	SLIRP	88	61.000	ENSOANG00000022366	SLIRP	86	61.000	Ornithorhynchus_anatinus
ENSFDAG00000008347	SLIRP	77	54.023	ENSORLG00000010761	slirp	66	54.023	Oryzias_latipes
ENSFDAG00000008347	SLIRP	77	55.172	ENSORLG00020022188	slirp	85	55.172	Oryzias_latipes_hni
ENSFDAG00000008347	SLIRP	77	54.023	ENSORLG00015020171	slirp	84	54.023	Oryzias_latipes_hsok
ENSFDAG00000008347	SLIRP	77	54.023	ENSOMEG00000019321	slirp	85	54.023	Oryzias_melastigma
ENSFDAG00000008347	SLIRP	79	66.292	ENSPPAG00000040710	-	96	67.021	Pan_paniscus
ENSFDAG00000008347	SLIRP	83	74.468	ENSPPRG00000014350	SLIRP	91	74.468	Panthera_pardus
ENSFDAG00000008347	SLIRP	83	74.468	ENSPTIG00000014196	SLIRP	91	74.468	Panthera_tigris_altaica
ENSFDAG00000008347	SLIRP	79	68.539	ENSPTRG00000030691	SLIRP	96	67.021	Pan_troglodytes
ENSFDAG00000008347	SLIRP	100	62.832	ENSPANG00000026323	SLIRP	96	68.085	Papio_anubis
ENSFDAG00000008347	SLIRP	51	56.897	ENSPKIG00000008831	slirp	57	56.897	Paramormyrops_kingsleyae
ENSFDAG00000008347	SLIRP	60	60.294	ENSPMGG00000010541	slirp	78	60.294	Periophthalmus_magnuspinnatus
ENSFDAG00000008347	SLIRP	86	66.327	ENSPEMG00000013234	Slirp	96	64.545	Peromyscus_maniculatus_bairdii
ENSFDAG00000008347	SLIRP	60	55.882	ENSPMAG00000009355	slirp	76	55.882	Petromyzon_marinus
ENSFDAG00000008347	SLIRP	75	63.529	ENSPCIG00000026842	-	88	63.529	Phascolarctos_cinereus
ENSFDAG00000008347	SLIRP	77	48.276	ENSPFOG00000006758	slirp	87	48.276	Poecilia_formosa
ENSFDAG00000008347	SLIRP	77	48.276	ENSPLAG00000011140	slirp	87	48.276	Poecilia_latipinna
ENSFDAG00000008347	SLIRP	77	48.276	ENSPMEG00000019535	slirp	87	48.276	Poecilia_mexicana
ENSFDAG00000008347	SLIRP	65	54.054	ENSPREG00000011673	slirp	74	54.054	Poecilia_reticulata
ENSFDAG00000008347	SLIRP	86	65.979	ENSPPYG00000006030	SLIRP	96	64.602	Pongo_abelii
ENSFDAG00000008347	SLIRP	89	68.317	ENSPCOG00000015159	SLIRP	91	68.317	Propithecus_coquereli
ENSFDAG00000008347	SLIRP	77	56.322	ENSPNAG00000008633	slirp	88	56.322	Pygocentrus_nattereri
ENSFDAG00000008347	SLIRP	68	66.234	ENSRBIG00000032998	-	81	65.591	Rhinopithecus_bieti
ENSFDAG00000008347	SLIRP	86	64.948	ENSRBIG00000032222	-	96	67.021	Rhinopithecus_bieti
ENSFDAG00000008347	SLIRP	66	68.000	ENSRBIG00000031396	-	86	67.033	Rhinopithecus_bieti
ENSFDAG00000008347	SLIRP	86	61.856	ENSRBIG00000035817	-	99	61.947	Rhinopithecus_bieti
ENSFDAG00000008347	SLIRP	72	67.901	ENSRROG00000041312	-	91	67.010	Rhinopithecus_roxellana
ENSFDAG00000008347	SLIRP	68	67.532	ENSRROG00000017133	-	92	66.667	Rhinopithecus_roxellana
ENSFDAG00000008347	SLIRP	86	63.918	ENSRROG00000036656	-	96	65.957	Rhinopithecus_roxellana
ENSFDAG00000008347	SLIRP	66	69.333	ENSRROG00000035604	-	86	68.132	Rhinopithecus_roxellana
ENSFDAG00000008347	SLIRP	83	68.085	ENSSBOG00000020014	SLIRP	96	68.085	Saimiri_boliviensis_boliviensis
ENSFDAG00000008347	SLIRP	62	62.857	ENSSFOG00015011165	slirp	71	62.857	Scleropages_formosus
ENSFDAG00000008347	SLIRP	77	44.828	ENSSMAG00000012930	slirp	85	44.828	Scophthalmus_maximus
ENSFDAG00000008347	SLIRP	77	55.172	ENSSDUG00000021883	slirp	56	55.172	Seriola_dumerili
ENSFDAG00000008347	SLIRP	77	55.172	ENSSLDG00000023136	slirp	77	55.172	Seriola_lalandi_dorsalis
ENSFDAG00000008347	SLIRP	78	49.451	ENSSPUG00000009346	SLIRP	91	49.451	Sphenodon_punctatus
ENSFDAG00000008347	SLIRP	65	54.054	ENSSPAG00000013477	slirp	74	54.054	Stegastes_partitus
ENSFDAG00000008347	SLIRP	100	74.336	ENSSSCG00000028167	SLIRP	97	74.336	Sus_scrofa
ENSFDAG00000008347	SLIRP	63	50.704	ENSTGUG00000012337	SLIRP	86	47.253	Taeniopygia_guttata
ENSFDAG00000008347	SLIRP	74	49.412	ENSTRUG00000020127	slirp	83	49.412	Takifugu_rubripes
ENSFDAG00000008347	SLIRP	100	72.566	ENSUAMG00000022445	SLIRP	97	72.566	Ursus_americanus
ENSFDAG00000008347	SLIRP	100	71.681	ENSUMAG00000007166	SLIRP	97	71.681	Ursus_maritimus
ENSFDAG00000008347	SLIRP	100	69.027	ENSVPAG00000001781	SLIRP	97	69.027	Vicugna_pacos
ENSFDAG00000008347	SLIRP	79	74.157	ENSVVUG00000004436	SLIRP	97	68.142	Vulpes_vulpes
ENSFDAG00000008347	SLIRP	62	57.143	ENSXETG00000030343	SLIRP	79	57.143	Xenopus_tropicalis
ENSFDAG00000008347	SLIRP	76	47.674	ENSXCOG00000009422	slirp	85	47.674	Xiphophorus_couchianus
ENSFDAG00000008347	SLIRP	77	48.276	ENSXMAG00000015655	slirp	87	48.276	Xiphophorus_maculatus