EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000008350 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 5215 bases
Position: chrKN120547.1:5359380-5364594
Accession: 104859127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000020562	PseudoU_synth_2	PF00849.22	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000011766	RPUSD3-201	3594	XM_010619645	ENSFDAP00000020562	325 (aa)	XP_010617947	-

Gene Model

Click here to download ENSFDAG00000008350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000008350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000008350	RPUSD3	86	31.973	ENSFDAG00000014307	RPUSD4	68	32.482

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000008350	RPUSD3	91	75.920	ENSG00000156990	RPUSD3	82	81.356	Homo_sapiens
ENSFDAG00000008350	RPUSD3	82	78.113	ENSAMEG00000016227	RPUSD3	75	78.113	Ailuropoda_melanoleuca
ENSFDAG00000008350	RPUSD3	80	56.705	ENSACAG00000009836	RPUSD3	74	56.705	Anolis_carolinensis
ENSFDAG00000008350	RPUSD3	57	56.923	ENSANAG00000007127	-	73	55.629	Aotus_nancymaae
ENSFDAG00000008350	RPUSD3	80	80.843	ENSBTAG00000007968	RPUSD3	76	80.843	Bos_taurus
ENSFDAG00000008350	RPUSD3	82	78.868	ENSCAFG00000029733	RPUSD3	75	78.868	Canis_familiaris
ENSFDAG00000008350	RPUSD3	82	78.868	ENSCAFG00020008582	RPUSD3	81	78.868	Canis_lupus_dingo
ENSFDAG00000008350	RPUSD3	81	80.916	ENSCHIG00000026027	RPUSD3	79	80.916	Capra_hircus
ENSFDAG00000008350	RPUSD3	77	79.518	ENSTSYG00000009994	RPUSD3	74	78.715	Carlito_syrichta
ENSFDAG00000008350	RPUSD3	81	88.973	ENSCAPG00000017559	RPUSD3	99	88.973	Cavia_aperea
ENSFDAG00000008350	RPUSD3	81	88.636	ENSCPOG00000037956	RPUSD3	74	88.636	Cavia_porcellus
ENSFDAG00000008350	RPUSD3	81	81.679	ENSCCAG00000029530	RPUSD3	73	83.871	Cebus_capucinus
ENSFDAG00000008350	RPUSD3	80	83.908	ENSCATG00000036939	RPUSD3	75	83.588	Cercocebus_atys
ENSFDAG00000008350	RPUSD3	81	83.969	ENSCSAG00000010506	RPUSD3	75	83.969	Chlorocebus_sabaeus
ENSFDAG00000008350	RPUSD3	53	80.909	ENSCHOG00000010151	-	65	80.909	Choloepus_hoffmanni
ENSFDAG00000008350	RPUSD3	79	54.086	ENSCPBG00000008825	RPUSD3	95	55.642	Chrysemys_picta_bellii
ENSFDAG00000008350	RPUSD3	81	84.351	ENSCANG00000040711	RPUSD3	75	84.351	Colobus_angolensis_palliatus
ENSFDAG00000008350	RPUSD3	84	72.993	ENSCGRG00001004923	Rpusd3	72	75.096	Cricetulus_griseus_chok1gshd
ENSFDAG00000008350	RPUSD3	84	72.993	ENSCGRG00000018315	Rpusd3	76	75.096	Cricetulus_griseus_crigri
ENSFDAG00000008350	RPUSD3	81	76.046	ENSDNOG00000039160	RPUSD3	70	76.046	Dasypus_novemcinctus
ENSFDAG00000008350	RPUSD3	80	75.849	ENSDORG00000026827	Rpusd3	92	75.849	Dipodomys_ordii
ENSFDAG00000008350	RPUSD3	81	75.191	ENSETEG00000006538	RPUSD3	74	75.191	Echinops_telfairi
ENSFDAG00000008350	RPUSD3	58	39.683	ENSEBUG00000015605	RPUSD3	61	39.683	Eptatretus_burgeri
ENSFDAG00000008350	RPUSD3	82	79.623	ENSEASG00005014160	RPUSD3	74	79.623	Equus_asinus_asinus
ENSFDAG00000008350	RPUSD3	90	74.497	ENSECAG00000019988	RPUSD3	74	80.377	Equus_caballus
ENSFDAG00000008350	RPUSD3	65	72.642	ENSEEUG00000007353	RPUSD3	60	72.642	Erinaceus_europaeus
ENSFDAG00000008350	RPUSD3	82	80.377	ENSFCAG00000014199	RPUSD3	75	80.377	Felis_catus
ENSFDAG00000008350	RPUSD3	81	48.289	ENSFALG00000012968	RPUSD3	96	47.529	Ficedula_albicollis
ENSFDAG00000008350	RPUSD3	81	54.373	ENSGAGG00000007493	RPUSD3	82	55.894	Gopherus_agassizii
ENSFDAG00000008350	RPUSD3	81	83.206	ENSGGOG00000013120	RPUSD3	75	83.206	Gorilla_gorilla
ENSFDAG00000008350	RPUSD3	85	89.531	ENSHGLG00000011722	RPUSD3	68	92.424	Heterocephalus_glaber_female
ENSFDAG00000008350	RPUSD3	85	89.531	ENSHGLG00100016038	RPUSD3	68	92.424	Heterocephalus_glaber_male
ENSFDAG00000008350	RPUSD3	81	79.545	ENSSTOG00000002125	RPUSD3	75	79.545	Ictidomys_tridecemlineatus
ENSFDAG00000008350	RPUSD3	82	72.830	ENSJJAG00000012679	Rpusd3	77	72.830	Jaculus_jaculus
ENSFDAG00000008350	RPUSD3	95	67.069	ENSLAFG00000017501	RPUSD3	77	78.030	Loxodonta_africana
ENSFDAG00000008350	RPUSD3	80	83.142	ENSMFAG00000032407	RPUSD3	74	83.142	Macaca_fascicularis
ENSFDAG00000008350	RPUSD3	80	83.525	ENSMMUG00000010628	RPUSD3	82	83.525	Macaca_mulatta
ENSFDAG00000008350	RPUSD3	81	82.824	ENSMNEG00000040308	RPUSD3	75	82.824	Macaca_nemestrina
ENSFDAG00000008350	RPUSD3	80	83.908	ENSMLEG00000033940	RPUSD3	74	83.908	Mandrillus_leucophaeus
ENSFDAG00000008350	RPUSD3	83	73.333	ENSMAUG00000015473	Rpusd3	75	75.194	Mesocricetus_auratus
ENSFDAG00000008350	RPUSD3	90	75.850	ENSMICG00000002315	RPUSD3	77	81.132	Microcebus_murinus
ENSFDAG00000008350	RPUSD3	81	73.864	ENSMOCG00000022613	Rpusd3	77	73.864	Microtus_ochrogaster
ENSFDAG00000008350	RPUSD3	86	60.072	ENSMODG00000005210	RPUSD3	69	62.214	Monodelphis_domestica
ENSFDAG00000008350	RPUSD3	85	72.563	MGP_CAROLIEiJ_G0028725	Rpusd3	75	77.114	Mus_caroli
ENSFDAG00000008350	RPUSD3	85	72.924	ENSMUSG00000051169	Rpusd3	75	77.612	Mus_musculus
ENSFDAG00000008350	RPUSD3	82	74.340	MGP_PahariEiJ_G0022476	Rpusd3	75	77.114	Mus_pahari
ENSFDAG00000008350	RPUSD3	85	72.202	MGP_SPRETEiJ_G0029753	Rpusd3	75	76.617	Mus_spretus
ENSFDAG00000008350	RPUSD3	81	79.924	ENSMPUG00000017132	RPUSD3	75	79.924	Mustela_putorius_furo
ENSFDAG00000008350	RPUSD3	81	81.818	ENSMLUG00000006135	RPUSD3	76	81.818	Myotis_lucifugus
ENSFDAG00000008350	RPUSD3	84	76.277	ENSNGAG00000023704	Rpusd3	78	78.544	Nannospalax_galili
ENSFDAG00000008350	RPUSD3	81	65.649	ENSNLEG00000004214	RPUSD3	73	85.161	Nomascus_leucogenys
ENSFDAG00000008350	RPUSD3	80	65.900	ENSMEUG00000013098	-	100	65.900	Notamacropus_eugenii
ENSFDAG00000008350	RPUSD3	81	61.364	ENSOPRG00000002300	RPUSD3	75	61.364	Ochotona_princeps
ENSFDAG00000008350	RPUSD3	81	84.848	ENSODEG00000018137	RPUSD3	91	84.848	Octodon_degus
ENSFDAG00000008350	RPUSD3	81	48.092	ENSOANG00000012081	-	91	48.092	Ornithorhynchus_anatinus
ENSFDAG00000008350	RPUSD3	85	65.141	ENSOCUG00000027885	RPUSD3	78	67.159	Oryctolagus_cuniculus
ENSFDAG00000008350	RPUSD3	82	78.113	ENSOGAG00000012592	RPUSD3	84	78.113	Otolemur_garnettii
ENSFDAG00000008350	RPUSD3	81	81.298	ENSOARG00000005928	RPUSD3	74	81.298	Ovis_aries
ENSFDAG00000008350	RPUSD3	81	83.650	ENSPPAG00000038083	RPUSD3	75	83.650	Pan_paniscus
ENSFDAG00000008350	RPUSD3	82	80.000	ENSPPRG00000024433	RPUSD3	75	80.000	Panthera_pardus
ENSFDAG00000008350	RPUSD3	82	81.132	ENSPTIG00000006828	RPUSD3	77	81.132	Panthera_tigris_altaica
ENSFDAG00000008350	RPUSD3	81	83.650	ENSPTRG00000051760	RPUSD3	75	83.650	Pan_troglodytes
ENSFDAG00000008350	RPUSD3	80	83.908	ENSPANG00000023885	RPUSD3	74	83.908	Papio_anubis
ENSFDAG00000008350	RPUSD3	85	71.841	ENSPEMG00000017245	Rpusd3	77	73.585	Peromyscus_maniculatus_bairdii
ENSFDAG00000008350	RPUSD3	86	64.029	ENSPCIG00000021901	RPUSD3	76	66.412	Phascolarctos_cinereus
ENSFDAG00000008350	RPUSD3	81	83.270	ENSPPYG00000013676	RPUSD3	75	83.270	Pongo_abelii
ENSFDAG00000008350	RPUSD3	82	81.509	ENSPCOG00000018314	RPUSD3	75	81.509	Propithecus_coquereli
ENSFDAG00000008350	RPUSD3	81	80.682	ENSPVAG00000011107	RPUSD3	75	80.682	Pteropus_vampyrus
ENSFDAG00000008350	RPUSD3	77	74.297	ENSRNOG00000009084	Rpusd3	78	74.297	Rattus_norvegicus
ENSFDAG00000008350	RPUSD3	80	84.674	ENSRBIG00000041230	RPUSD3	74	84.674	Rhinopithecus_bieti
ENSFDAG00000008350	RPUSD3	80	84.674	ENSRROG00000043328	RPUSD3	75	84.351	Rhinopithecus_roxellana
ENSFDAG00000008350	RPUSD3	81	80.916	ENSSBOG00000036106	RPUSD3	75	80.916	Saimiri_boliviensis_boliviensis
ENSFDAG00000008350	RPUSD3	87	61.837	ENSSHAG00000015536	RPUSD3	84	65.267	Sarcophilus_harrisii
ENSFDAG00000008350	RPUSD3	81	79.008	ENSSSCG00000011555	RPUSD3	74	79.008	Sus_scrofa
ENSFDAG00000008350	RPUSD3	72	51.931	ENSTGUG00000008744	RPUSD3	93	51.613	Taeniopygia_guttata
ENSFDAG00000008350	RPUSD3	62	77.723	ENSTBEG00000000176	RPUSD3	70	77.723	Tupaia_belangeri
ENSFDAG00000008350	RPUSD3	80	79.310	ENSTTRG00000007544	RPUSD3	74	79.310	Tursiops_truncatus
ENSFDAG00000008350	RPUSD3	81	79.167	ENSUAMG00000011354	RPUSD3	82	79.167	Ursus_americanus
ENSFDAG00000008350	RPUSD3	82	78.868	ENSUMAG00000018830	RPUSD3	75	78.868	Ursus_maritimus
ENSFDAG00000008350	RPUSD3	82	78.868	ENSVVUG00000023735	RPUSD3	77	78.868	Vulpes_vulpes
ENSFDAG00000008350	RPUSD3	83	47.253	ENSXETG00000023546	rpusd3	93	47.925	Xenopus_tropicalis