EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000008687 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 3182 bases
Position: chrKN122676.1:408461-411642
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	1	10
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	2	10
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	3	10
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	4	10
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	5	10
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	6	10
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	7	10
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	8	10
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	9	10
ENSFDAP00000020101	zf-C2H2	PF00096.26	1.3e-59	10	10
ENSFDAP00000020101	zf-met	PF12874.7	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000012176	-	2034	-	ENSFDAP00000020101	346 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000008687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000008687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000008687	-	97	53.698	ENSFDAG00000005609	-	84	53.698
ENSFDAG00000008687	-	94	50.633	ENSFDAG00000007103	ZNF236	68	50.633
ENSFDAG00000008687	-	90	54.667	ENSFDAG00000006075	-	100	54.667
ENSFDAG00000008687	-	92	38.889	ENSFDAG00000020159	ZNF319	87	38.889
ENSFDAG00000008687	-	90	57.746	ENSFDAG00000010369	-	84	57.746
ENSFDAG00000008687	-	75	41.270	ENSFDAG00000004155	-	68	41.270
ENSFDAG00000008687	-	89	38.866	ENSFDAG00000016841	GTF3A	85	39.024
ENSFDAG00000008687	-	92	35.354	ENSFDAG00000010852	-	90	35.354
ENSFDAG00000008687	-	93	45.745	ENSFDAG00000010005	ZFP64	70	45.745
ENSFDAG00000008687	-	90	48.913	ENSFDAG00000014929	ZIC3	60	47.788
ENSFDAG00000008687	-	97	36.709	ENSFDAG00000016560	ZNF521	92	36.709
ENSFDAG00000008687	-	90	55.039	ENSFDAG00000015590	ZNF235	72	55.039
ENSFDAG00000008687	-	97	54.730	ENSFDAG00000020138	-	84	54.730
ENSFDAG00000008687	-	89	59.184	ENSFDAG00000017812	SALL4	53	59.184
ENSFDAG00000008687	-	89	46.512	ENSFDAG00000019296	-	100	46.512
ENSFDAG00000008687	-	93	40.000	ENSFDAG00000005614	PATZ1	50	32.283
ENSFDAG00000008687	-	95	60.000	ENSFDAG00000017346	ZNF367	50	60.000
ENSFDAG00000008687	-	92	38.671	ENSFDAG00000003974	ZNF574	93	38.806
ENSFDAG00000008687	-	90	55.375	ENSFDAG00000015190	-	67	55.375
ENSFDAG00000008687	-	90	41.538	ENSFDAG00000016582	ZNF398	51	43.842
ENSFDAG00000008687	-	90	48.913	ENSFDAG00000013872	ZIC1	54	48.913
ENSFDAG00000008687	-	90	51.408	ENSFDAG00000021361	PRDM5	67	51.408
ENSFDAG00000008687	-	90	50.990	ENSFDAG00000005159	-	52	53.883
ENSFDAG00000008687	-	93	38.710	ENSFDAG00000018453	ZBTB12	71	38.710
ENSFDAG00000008687	-	92	35.336	ENSFDAG00000019879	ZNF526	89	41.905
ENSFDAG00000008687	-	90	54.610	ENSFDAG00000008114	ZNF81	73	54.610
ENSFDAG00000008687	-	98	68.167	ENSFDAG00000009594	-	86	68.167
ENSFDAG00000008687	-	90	39.000	ENSFDAG00000019359	-	78	50.980
ENSFDAG00000008687	-	90	32.222	ENSFDAG00000012603	ZNF423	93	31.720
ENSFDAG00000008687	-	92	56.637	ENSFDAG00000008549	ZNF2	60	56.637
ENSFDAG00000008687	-	90	57.143	ENSFDAG00000008733	SCRT1	61	57.143
ENSFDAG00000008687	-	90	41.573	ENSFDAG00000008730	OVOL2	69	41.573
ENSFDAG00000008687	-	91	46.610	ENSFDAG00000006720	WT1	54	45.455
ENSFDAG00000008687	-	89	34.615	ENSFDAG00000013867	ZNF646	69	32.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000008687	-	100	96.542	ENSCPOG00000033345	-	100	96.542	Cavia_porcellus
ENSFDAG00000008687	-	99	88.696	ENSCGRG00001023858	Zfp560	72	88.696	Cricetulus_griseus_chok1gshd
ENSFDAG00000008687	-	99	88.696	ENSCGRG00000012088	Zfp560	72	88.696	Cricetulus_griseus_crigri
ENSFDAG00000008687	-	100	97.110	ENSHGLG00000019054	-	100	97.110	Heterocephalus_glaber_female
ENSFDAG00000008687	-	100	97.110	ENSHGLG00100015134	-	90	97.110	Heterocephalus_glaber_male
ENSFDAG00000008687	-	100	91.040	ENSSTOG00000033893	-	91	91.040	Ictidomys_tridecemlineatus
ENSFDAG00000008687	-	100	85.838	ENSMOCG00000007908	Zfp560	84	85.838	Microtus_ochrogaster
ENSFDAG00000008687	-	100	89.884	ENSNGAG00000015897	Zfp560	83	89.884	Nannospalax_galili
ENSFDAG00000008687	-	100	94.509	ENSODEG00000017047	-	100	94.509	Octodon_degus
ENSFDAG00000008687	-	97	85.759	ENSOCUG00000029594	-	90	85.759	Oryctolagus_cuniculus
ENSFDAG00000008687	-	90	62.302	ENSOGAG00000025131	ZNF121	100	62.302	Otolemur_garnettii
ENSFDAG00000008687	-	100	86.127	ENSRNOG00000048394	Zfp560	82	86.127	Rattus_norvegicus