EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000008733 (Gene tree)
Gene ID: -
Gene Symbol: SCRT1
Alias: DKFZp547F072|ZNF898
Full Name: scratch family transcriptional repressor 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 2904 bases
Position: chrKN122397.1:6154791-6157694
Accession: 104866559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000020030	zf-C2H2	PF00096.26	3.2e-26	1	4
ENSFDAP00000020030	zf-C2H2	PF00096.26	3.2e-26	2	4
ENSFDAP00000020030	zf-C2H2	PF00096.26	3.2e-26	3	4
ENSFDAP00000020030	zf-C2H2	PF00096.26	3.2e-26	4	4
ENSFDAP00000020030	zf-met	PF12874.7	4.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000012247	SCRT1-201	666	XM_010630675	ENSFDAP00000020030	222 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000008733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000008733's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000008733	SCRT1	88	42.105	ENSFDAG00000016841	GTF3A	92	42.105
ENSFDAG00000008733	SCRT1	59	33.813	ENSFDAG00000013872	ZIC1	53	33.813
ENSFDAG00000008733	SCRT1	76	46.053	ENSFDAG00000007103	ZNF236	51	46.053
ENSFDAG00000008733	SCRT1	65	38.806	ENSFDAG00000008114	ZNF81	56	38.806
ENSFDAG00000008733	SCRT1	68	38.636	ENSFDAG00000008549	ZNF2	75	38.636
ENSFDAG00000008733	SCRT1	60	44.444	ENSFDAG00000006075	-	100	44.444
ENSFDAG00000008733	SCRT1	68	37.255	ENSFDAG00000020159	ZNF319	74	37.255
ENSFDAG00000008733	SCRT1	60	41.964	ENSFDAG00000019296	-	100	41.964
ENSFDAG00000008733	SCRT1	59	36.047	ENSFDAG00000010852	-	54	36.047
ENSFDAG00000008733	SCRT1	77	51.765	ENSFDAG00000016958	SNAI2	62	51.765
ENSFDAG00000008733	SCRT1	61	38.235	ENSFDAG00000015190	-	76	38.235
ENSFDAG00000008733	SCRT1	64	41.892	ENSFDAG00000003974	ZNF574	59	37.963
ENSFDAG00000008733	SCRT1	61	42.857	ENSFDAG00000009594	-	77	42.857
ENSFDAG00000008733	SCRT1	61	38.060	ENSFDAG00000020138	-	63	38.060
ENSFDAG00000008733	SCRT1	65	39.394	ENSFDAG00000015590	ZNF235	66	39.394
ENSFDAG00000008733	SCRT1	65	41.667	ENSFDAG00000010369	-	81	41.667
ENSFDAG00000008733	SCRT1	61	38.806	ENSFDAG00000005609	-	66	38.806
ENSFDAG00000008733	SCRT1	89	36.296	ENSFDAG00000021361	PRDM5	80	36.296
ENSFDAG00000008733	SCRT1	61	57.143	ENSFDAG00000008687	-	90	57.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000008733	SCRT1	97	62.547	ENSAPOG00000015197	-	96	62.547	Acanthochromis_polyacanthus
ENSFDAG00000008733	SCRT1	97	62.500	ENSAPOG00000009279	scrt1b	96	62.500	Acanthochromis_polyacanthus
ENSFDAG00000008733	SCRT1	98	87.162	ENSAPOG00000003680	scrt2	97	57.762	Acanthochromis_polyacanthus
ENSFDAG00000008733	SCRT1	98	58.582	ENSACIG00000012604	scrt2	97	58.582	Amphilophus_citrinellus
ENSFDAG00000008733	SCRT1	97	62.362	ENSACIG00000013613	scrt1b	96	62.362	Amphilophus_citrinellus
ENSFDAG00000008733	SCRT1	97	62.500	ENSAOCG00000003910	scrt1b	96	62.500	Amphiprion_ocellaris
ENSFDAG00000008733	SCRT1	80	76.087	ENSAOCG00000023304	-	60	76.087	Amphiprion_ocellaris
ENSFDAG00000008733	SCRT1	98	87.162	ENSAOCG00000021557	scrt2	97	57.762	Amphiprion_ocellaris
ENSFDAG00000008733	SCRT1	80	76.087	ENSAPEG00000005677	-	60	76.087	Amphiprion_percula
ENSFDAG00000008733	SCRT1	98	87.162	ENSAPEG00000022558	scrt2	97	57.762	Amphiprion_percula
ENSFDAG00000008733	SCRT1	97	62.500	ENSAPEG00000000869	scrt1b	96	62.500	Amphiprion_percula
ENSFDAG00000008733	SCRT1	97	63.359	ENSATEG00000011660	-	96	63.359	Anabas_testudineus
ENSFDAG00000008733	SCRT1	97	62.362	ENSATEG00000002302	scrt1b	96	62.362	Anabas_testudineus
ENSFDAG00000008733	SCRT1	67	83.784	ENSACAG00000016109	SCRT2	67	83.784	Anolis_carolinensis
ENSFDAG00000008733	SCRT1	97	62.868	ENSACLG00000007162	scrt1b	96	62.868	Astatotilapia_calliptera
ENSFDAG00000008733	SCRT1	97	65.074	ENSAMXG00000042624	SCRT1	97	63.838	Astyanax_mexicanus
ENSFDAG00000008733	SCRT1	66	86.301	ENSAMXG00000034158	scrt2	53	86.301	Astyanax_mexicanus
ENSFDAG00000008733	SCRT1	97	62.454	ENSAMXG00000038085	scrt1a	96	62.454	Astyanax_mexicanus
ENSFDAG00000008733	SCRT1	73	59.877	WBGene00000468	ces-1	57	59.877	Caenorhabditis_elegans
ENSFDAG00000008733	SCRT1	98	62.500	ENSCPBG00000018899	SCRT1	97	61.993	Chrysemys_picta_bellii
ENSFDAG00000008733	SCRT1	84	52.033	ENSCPBG00000027613	SCRT2	100	52.033	Chrysemys_picta_bellii
ENSFDAG00000008733	SCRT1	86	63.682	ENSCGRG00000001380	Scrt2	100	63.682	Cricetulus_griseus_crigri
ENSFDAG00000008733	SCRT1	97	62.731	ENSCSEG00000008596	scrt1b	96	62.731	Cynoglossus_semilaevis
ENSFDAG00000008733	SCRT1	96	64.935	ENSCSEG00000014892	-	77	64.935	Cynoglossus_semilaevis
ENSFDAG00000008733	SCRT1	97	61.624	ENSCVAG00000009561	scrt1b	96	61.624	Cyprinodon_variegatus
ENSFDAG00000008733	SCRT1	97	61.852	ENSDARG00000100821	scrt1a	97	61.852	Danio_rerio
ENSFDAG00000008733	SCRT1	97	63.941	ENSDARG00000040214	scrt1b	96	63.941	Danio_rerio
ENSFDAG00000008733	SCRT1	97	62.963	ENSELUG00000005435	scrt1b	96	62.963	Esox_lucius
ENSFDAG00000008733	SCRT1	97	60.967	ENSELUG00000022228	scrt1a	96	60.967	Esox_lucius
ENSFDAG00000008733	SCRT1	67	85.235	ENSFALG00000005718	SCRT2	63	85.235	Ficedula_albicollis
ENSFDAG00000008733	SCRT1	98	57.875	ENSFHEG00000005732	scrt2	97	57.875	Fundulus_heteroclitus
ENSFDAG00000008733	SCRT1	97	62.362	ENSFHEG00000014820	scrt1b	96	62.362	Fundulus_heteroclitus
ENSFDAG00000008733	SCRT1	98	87.755	ENSGMOG00000019519	scrt2	71	87.755	Gadus_morhua
ENSFDAG00000008733	SCRT1	69	88.889	ENSGMOG00000013833	-	52	88.889	Gadus_morhua
ENSFDAG00000008733	SCRT1	96	59.851	ENSGMOG00000000629	scrt1b	96	59.851	Gadus_morhua
ENSFDAG00000008733	SCRT1	67	85.135	ENSGALG00000028912	SCRT2	99	55.516	Gallus_gallus
ENSFDAG00000008733	SCRT1	97	61.765	ENSGAFG00000007636	scrt1b	96	61.765	Gambusia_affinis
ENSFDAG00000008733	SCRT1	97	63.218	ENSGAFG00000009650	-	97	63.218	Gambusia_affinis
ENSFDAG00000008733	SCRT1	96	59.108	ENSGACG00000008982	scrt1b	96	59.108	Gasterosteus_aculeatus
ENSFDAG00000008733	SCRT1	97	57.840	ENSGACG00000004072	-	97	57.840	Gasterosteus_aculeatus
ENSFDAG00000008733	SCRT1	67	83.784	ENSGAGG00000020760	-	57	83.784	Gopherus_agassizii
ENSFDAG00000008733	SCRT1	100	55.109	ENSGAGG00000020761	SCRT2	99	55.109	Gopherus_agassizii
ENSFDAG00000008733	SCRT1	98	63.704	ENSGAGG00000011736	SCRT1	98	63.704	Gopherus_agassizii
ENSFDAG00000008733	SCRT1	97	62.868	ENSHBUG00000016621	scrt1b	96	62.868	Haplochromis_burtoni
ENSFDAG00000008733	SCRT1	98	87.162	ENSHBUG00000012492	scrt2	74	87.162	Haplochromis_burtoni
ENSFDAG00000008733	SCRT1	75	80.120	ENSHCOG00000008116	scrt2	56	80.120	Hippocampus_comes
ENSFDAG00000008733	SCRT1	97	60.370	ENSHCOG00000016179	-	96	60.370	Hippocampus_comes
ENSFDAG00000008733	SCRT1	97	63.603	ENSHCOG00000016704	scrt1b	96	63.603	Hippocampus_comes
ENSFDAG00000008733	SCRT1	97	61.397	ENSIPUG00000004551	scrt1a	97	61.397	Ictalurus_punctatus
ENSFDAG00000008733	SCRT1	97	62.782	ENSIPUG00000005547	-	98	62.782	Ictalurus_punctatus
ENSFDAG00000008733	SCRT1	76	80.357	ENSSTOG00000032944	SCRT2	90	80.588	Ictidomys_tridecemlineatus
ENSFDAG00000008733	SCRT1	97	62.500	ENSKMAG00000005484	scrt1b	96	62.500	Kryptolebias_marmoratus
ENSFDAG00000008733	SCRT1	97	57.785	ENSLBEG00000023388	-	97	57.439	Labrus_bergylta
ENSFDAG00000008733	SCRT1	67	87.838	ENSLBEG00000015419	scrt2	51	80.606	Labrus_bergylta
ENSFDAG00000008733	SCRT1	97	62.731	ENSLACG00000003588	SCRT1	96	62.222	Latimeria_chalumnae
ENSFDAG00000008733	SCRT1	97	62.963	ENSLOCG00000007573	scrt1b	97	62.963	Lepisosteus_oculatus
ENSFDAG00000008733	SCRT1	96	78.972	ENSMFAG00000035496	SCRT1	95	81.166	Macaca_fascicularis
ENSFDAG00000008733	SCRT1	98	87.838	ENSMAMG00000001291	scrt2	74	87.838	Mastacembelus_armatus
ENSFDAG00000008733	SCRT1	97	62.132	ENSMAMG00000011698	scrt1b	96	62.132	Mastacembelus_armatus
ENSFDAG00000008733	SCRT1	97	62.868	ENSMZEG00005005627	scrt1b	96	62.868	Maylandia_zebra
ENSFDAG00000008733	SCRT1	98	87.162	ENSMZEG00005026445	scrt2	74	87.162	Maylandia_zebra
ENSFDAG00000008733	SCRT1	67	85.135	ENSMGAG00000016579	SCRT2	63	85.135	Meleagris_gallopavo
ENSFDAG00000008733	SCRT1	98	87.075	ENSMMOG00000009272	scrt2	97	78.916	Mola_mola
ENSFDAG00000008733	SCRT1	97	61.255	ENSMMOG00000003327	scrt1b	96	61.255	Mola_mola
ENSFDAG00000008733	SCRT1	98	57.565	ENSMALG00000013656	scrt2	97	57.721	Monopterus_albus
ENSFDAG00000008733	SCRT1	97	62.500	ENSMALG00000012704	scrt1b	96	62.500	Monopterus_albus
ENSFDAG00000008733	SCRT1	96	67.281	ENSNGAG00000020815	Scrt2	94	67.281	Nannospalax_galili
ENSFDAG00000008733	SCRT1	98	58.364	ENSNBRG00000007221	scrt2	97	60.075	Neolamprologus_brichardi
ENSFDAG00000008733	SCRT1	97	60.662	ENSNBRG00000013983	scrt1b	96	60.662	Neolamprologus_brichardi
ENSFDAG00000008733	SCRT1	97	56.569	ENSONIG00000003152	-	96	56.569	Oreochromis_niloticus
ENSFDAG00000008733	SCRT1	97	62.868	ENSONIG00000006007	scrt1b	96	62.868	Oreochromis_niloticus
ENSFDAG00000008733	SCRT1	97	61.993	ENSORLG00000025651	scrt1b	96	61.993	Oryzias_latipes
ENSFDAG00000008733	SCRT1	97	61.993	ENSORLG00020012967	scrt1b	96	61.993	Oryzias_latipes_hni
ENSFDAG00000008733	SCRT1	97	61.993	ENSORLG00015019165	scrt1b	96	61.993	Oryzias_latipes_hsok
ENSFDAG00000008733	SCRT1	97	61.993	ENSOMEG00000003925	scrt1b	96	61.993	Oryzias_melastigma
ENSFDAG00000008733	SCRT1	97	64.074	ENSPKIG00000022303	SCRT1	96	64.074	Paramormyrops_kingsleyae
ENSFDAG00000008733	SCRT1	97	61.111	ENSPKIG00000020085	scrt1a	97	61.111	Paramormyrops_kingsleyae
ENSFDAG00000008733	SCRT1	98	59.353	ENSPMGG00000016561	scrt2	97	59.353	Periophthalmus_magnuspinnatus
ENSFDAG00000008733	SCRT1	97	59.011	ENSPMGG00000021402	-	97	59.011	Periophthalmus_magnuspinnatus
ENSFDAG00000008733	SCRT1	97	61.481	ENSPMGG00000002260	scrt1b	96	61.481	Periophthalmus_magnuspinnatus
ENSFDAG00000008733	SCRT1	97	57.785	ENSPFOG00000005616	-	97	57.785	Poecilia_formosa
ENSFDAG00000008733	SCRT1	97	61.765	ENSPFOG00000017719	scrt1b	96	61.765	Poecilia_formosa
ENSFDAG00000008733	SCRT1	97	61.765	ENSPLAG00000009876	scrt1b	96	61.765	Poecilia_latipinna
ENSFDAG00000008733	SCRT1	97	57.785	ENSPLAG00000011718	-	97	57.785	Poecilia_latipinna
ENSFDAG00000008733	SCRT1	98	57.040	ENSPLAG00000005765	scrt2	97	57.040	Poecilia_latipinna
ENSFDAG00000008733	SCRT1	98	57.040	ENSPMEG00000001538	scrt2	97	57.040	Poecilia_mexicana
ENSFDAG00000008733	SCRT1	97	61.765	ENSPMEG00000013274	scrt1b	96	61.765	Poecilia_mexicana
ENSFDAG00000008733	SCRT1	97	57.785	ENSPMEG00000011706	-	97	57.785	Poecilia_mexicana
ENSFDAG00000008733	SCRT1	97	57.785	ENSPREG00000012166	-	97	57.785	Poecilia_reticulata
ENSFDAG00000008733	SCRT1	97	61.765	ENSPREG00000018985	scrt1b	96	61.765	Poecilia_reticulata
ENSFDAG00000008733	SCRT1	97	62.868	ENSPNYG00000017733	scrt1b	96	62.868	Pundamilia_nyererei
ENSFDAG00000008733	SCRT1	98	57.554	ENSPNYG00000013109	scrt2	97	60.075	Pundamilia_nyererei
ENSFDAG00000008733	SCRT1	97	63.197	ENSPNAG00000017415	scrt1a	96	63.197	Pygocentrus_nattereri
ENSFDAG00000008733	SCRT1	97	63.469	ENSPNAG00000027880	-	97	64.576	Pygocentrus_nattereri
ENSFDAG00000008733	SCRT1	97	63.941	ENSSFOG00015001195	SCRT1	96	63.941	Scleropages_formosus
ENSFDAG00000008733	SCRT1	88	70.408	ENSSMAG00000005122	-	64	70.408	Scophthalmus_maximus
ENSFDAG00000008733	SCRT1	97	62.132	ENSSMAG00000019207	scrt1b	96	62.132	Scophthalmus_maximus
ENSFDAG00000008733	SCRT1	97	58.478	ENSSDUG00000013215	-	97	58.478	Seriola_dumerili
ENSFDAG00000008733	SCRT1	97	62.868	ENSSDUG00000007752	scrt1b	96	62.868	Seriola_dumerili
ENSFDAG00000008733	SCRT1	97	58.478	ENSSLDG00000016454	-	97	58.478	Seriola_lalandi_dorsalis
ENSFDAG00000008733	SCRT1	97	62.868	ENSSLDG00000017166	scrt1b	96	62.868	Seriola_lalandi_dorsalis
ENSFDAG00000008733	SCRT1	100	56.618	ENSSPUG00000018637	SCRT2	99	55.474	Sphenodon_punctatus
ENSFDAG00000008733	SCRT1	80	75.543	ENSSPAG00000006788	-	73	64.574	Stegastes_partitus
ENSFDAG00000008733	SCRT1	97	62.868	ENSSPAG00000002200	scrt1b	96	62.868	Stegastes_partitus
ENSFDAG00000008733	SCRT1	98	57.554	ENSSPAG00000014018	scrt2	97	60.075	Stegastes_partitus
ENSFDAG00000008733	SCRT1	64	87.943	ENSTGUG00000006801	SCRT2	62	87.943	Taeniopygia_guttata
ENSFDAG00000008733	SCRT1	63	91.429	ENSTRUG00000019558	-	51	90.909	Takifugu_rubripes
ENSFDAG00000008733	SCRT1	96	61.481	ENSTRUG00000011637	scrt1b	97	61.481	Takifugu_rubripes
ENSFDAG00000008733	SCRT1	97	54.296	ENSTRUG00000007620	scrt2	96	54.296	Takifugu_rubripes
ENSFDAG00000008733	SCRT1	98	56.940	ENSTNIG00000012473	scrt2	97	56.940	Tetraodon_nigroviridis
ENSFDAG00000008733	SCRT1	96	61.852	ENSTNIG00000018384	scrt1b	96	61.852	Tetraodon_nigroviridis
ENSFDAG00000008733	SCRT1	97	62.835	ENSXCOG00000019861	-	97	62.835	Xiphophorus_couchianus
ENSFDAG00000008733	SCRT1	97	61.765	ENSXCOG00000019675	scrt1b	96	61.765	Xiphophorus_couchianus
ENSFDAG00000008733	SCRT1	97	57.785	ENSXMAG00000015353	-	97	57.785	Xiphophorus_maculatus
ENSFDAG00000008733	SCRT1	97	61.765	ENSXMAG00000027885	scrt1b	96	61.765	Xiphophorus_maculatus