EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000008954 (Gene tree)
Gene ID: -
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 15537 bases
Position: chrKN123381.1:884908-900444
Accession: 104875473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000019711	AD	PF09793.9	2.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000012521	LSM12-201	516	XM_010643013	ENSFDAP00000019711	171 (aa)	XP_010641315	-

Gene Model

Click here to download ENSFDAG00000008954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000008954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000008954	LSM12	87	99.324	ENSG00000161654	LSM12	76	99.324	Homo_sapiens
ENSFDAG00000008954	LSM12	91	82.692	ENSAPOG00000007907	lsm12b	80	82.692	Acanthochromis_polyacanthus
ENSFDAG00000008954	LSM12	87	99.324	ENSAMEG00000018321	LSM12	75	99.324	Ailuropoda_melanoleuca
ENSFDAG00000008954	LSM12	91	80.769	ENSACIG00000008538	lsm12b	80	80.769	Amphilophus_citrinellus
ENSFDAG00000008954	LSM12	91	82.051	ENSAOCG00000021847	lsm12b	70	82.051	Amphiprion_ocellaris
ENSFDAG00000008954	LSM12	91	82.051	ENSAPEG00000002252	lsm12b	80	82.051	Amphiprion_percula
ENSFDAG00000008954	LSM12	91	81.410	ENSATEG00000005705	lsm12b	80	81.410	Anabas_testudineus
ENSFDAG00000008954	LSM12	87	93.919	ENSACAG00000004618	LSM12	76	93.919	Anolis_carolinensis
ENSFDAG00000008954	LSM12	87	99.324	ENSANAG00000029011	LSM12	81	97.297	Aotus_nancymaae
ENSFDAG00000008954	LSM12	91	81.410	ENSACLG00000026332	lsm12b	80	81.410	Astatotilapia_calliptera
ENSFDAG00000008954	LSM12	91	81.410	ENSAMXG00000032952	lsm12b	80	81.410	Astyanax_mexicanus
ENSFDAG00000008954	LSM12	99	68.508	ENSAMXG00000036117	lsm12a	84	68.508	Astyanax_mexicanus
ENSFDAG00000008954	LSM12	87	99.324	ENSBTAG00000016252	LSM12	76	99.324	Bos_taurus
ENSFDAG00000008954	LSM12	87	99.324	ENSCJAG00000048480	LSM12	81	97.297	Callithrix_jacchus
ENSFDAG00000008954	LSM12	87	99.324	ENSCAFG00000014379	LSM12	69	99.324	Canis_familiaris
ENSFDAG00000008954	LSM12	87	99.324	ENSCAFG00020012173	LSM12	76	99.324	Canis_lupus_dingo
ENSFDAG00000008954	LSM12	87	99.324	ENSCHIG00000018175	LSM12	76	99.324	Capra_hircus
ENSFDAG00000008954	LSM12	87	99.324	ENSTSYG00000036361	LSM12	76	99.324	Carlito_syrichta
ENSFDAG00000008954	LSM12	87	97.973	ENSCAPG00000009647	LSM12	81	97.973	Cavia_aperea
ENSFDAG00000008954	LSM12	87	97.973	ENSCPOG00000012860	LSM12	81	95.495	Cavia_porcellus
ENSFDAG00000008954	LSM12	87	99.324	ENSCCAG00000032905	LSM12	81	97.297	Cebus_capucinus
ENSFDAG00000008954	LSM12	87	99.324	ENSCATG00000030577	-	81	97.297	Cercocebus_atys
ENSFDAG00000008954	LSM12	87	97.973	ENSCLAG00000015759	LSM12	81	95.495	Chinchilla_lanigera
ENSFDAG00000008954	LSM12	87	98.649	ENSCSAG00000003486	LSM12	76	98.649	Chlorocebus_sabaeus
ENSFDAG00000008954	LSM12	64	98.165	ENSCHOG00000001198	LSM12	100	98.165	Choloepus_hoffmanni
ENSFDAG00000008954	LSM12	87	92.568	ENSCPBG00000027105	LSM12	76	92.568	Chrysemys_picta_bellii
ENSFDAG00000008954	LSM12	87	99.324	ENSCANG00000043328	LSM12	81	97.297	Colobus_angolensis_palliatus
ENSFDAG00000008954	LSM12	87	99.324	ENSCGRG00001002094	Lsm12	81	97.297	Cricetulus_griseus_chok1gshd
ENSFDAG00000008954	LSM12	87	99.324	ENSCGRG00000004316	Lsm12	84	99.324	Cricetulus_griseus_crigri
ENSFDAG00000008954	LSM12	91	80.769	ENSCSEG00000008434	lsm12b	80	80.769	Cynoglossus_semilaevis
ENSFDAG00000008954	LSM12	91	81.410	ENSCVAG00000008755	lsm12b	80	81.410	Cyprinodon_variegatus
ENSFDAG00000008954	LSM12	87	75.676	ENSDARG00000028848	lsm12a	76	75.676	Danio_rerio
ENSFDAG00000008954	LSM12	87	85.135	ENSDARG00000109510	lsm12b	76	85.135	Danio_rerio
ENSFDAG00000008954	LSM12	87	98.649	ENSDNOG00000002418	LSM12	69	98.649	Dasypus_novemcinctus
ENSFDAG00000008954	LSM12	87	99.324	ENSDORG00000016381	Lsm12	81	97.297	Dipodomys_ordii
ENSFDAG00000008954	LSM12	87	98.649	ENSETEG00000008374	LSM12	76	98.649	Echinops_telfairi
ENSFDAG00000008954	LSM12	86	87.755	ENSETEG00000011012	-	84	87.755	Echinops_telfairi
ENSFDAG00000008954	LSM12	70	60.504	ENSEBUG00000016299	lsm12a	66	60.504	Eptatretus_burgeri
ENSFDAG00000008954	LSM12	87	99.324	ENSEASG00005010155	LSM12	76	99.324	Equus_asinus_asinus
ENSFDAG00000008954	LSM12	87	99.324	ENSECAG00000009071	LSM12	81	97.297	Equus_caballus
ENSFDAG00000008954	LSM12	87	97.973	ENSEEUG00000002419	-	97	97.973	Erinaceus_europaeus
ENSFDAG00000008954	LSM12	87	82.432	ENSELUG00000000256	-	76	82.432	Esox_lucius
ENSFDAG00000008954	LSM12	87	84.459	ENSELUG00000015538	lsm12b	69	84.459	Esox_lucius
ENSFDAG00000008954	LSM12	87	99.324	ENSFCAG00000037021	LSM12	76	99.324	Felis_catus
ENSFDAG00000008954	LSM12	91	80.128	ENSFHEG00000019913	lsm12b	80	80.128	Fundulus_heteroclitus
ENSFDAG00000008954	LSM12	91	80.769	ENSGMOG00000015449	lsm12b	99	80.769	Gadus_morhua
ENSFDAG00000008954	LSM12	87	93.919	ENSGALG00000039803	LSM12	97	93.919	Gallus_gallus
ENSFDAG00000008954	LSM12	91	80.769	ENSGAFG00000011829	lsm12b	80	80.769	Gambusia_affinis
ENSFDAG00000008954	LSM12	91	81.410	ENSGACG00000003428	lsm12b	99	81.410	Gasterosteus_aculeatus
ENSFDAG00000008954	LSM12	87	93.919	ENSGAGG00000021965	LSM12	76	93.919	Gopherus_agassizii
ENSFDAG00000008954	LSM12	87	99.324	ENSGGOG00000010589	-	81	97.297	Gorilla_gorilla
ENSFDAG00000008954	LSM12	87	85.135	ENSHBUG00000007667	lsm12b	66	85.135	Haplochromis_burtoni
ENSFDAG00000008954	LSM12	87	99.324	ENSHGLG00000011411	LSM12	81	97.297	Heterocephalus_glaber_female
ENSFDAG00000008954	LSM12	87	99.324	ENSHGLG00100000241	LSM12	79	99.324	Heterocephalus_glaber_male
ENSFDAG00000008954	LSM12	99	71.111	ENSHCOG00000002094	lsm12b	92	71.111	Hippocampus_comes
ENSFDAG00000008954	LSM12	85	73.973	ENSIPUG00000008936	lsm12a	74	73.973	Ictalurus_punctatus
ENSFDAG00000008954	LSM12	91	82.051	ENSIPUG00000014800	lsm12	80	82.051	Ictalurus_punctatus
ENSFDAG00000008954	LSM12	87	99.324	ENSSTOG00000007403	LSM12	81	97.297	Ictidomys_tridecemlineatus
ENSFDAG00000008954	LSM12	87	86.577	ENSJJAG00000011793	-	78	86.577	Jaculus_jaculus
ENSFDAG00000008954	LSM12	69	86.441	ENSJJAG00000014652	-	69	86.441	Jaculus_jaculus
ENSFDAG00000008954	LSM12	87	97.973	ENSJJAG00000004364	-	81	96.396	Jaculus_jaculus
ENSFDAG00000008954	LSM12	90	71.154	ENSKMAG00000007704	lsm12b	51	71.154	Kryptolebias_marmoratus
ENSFDAG00000008954	LSM12	91	82.051	ENSLBEG00000027999	lsm12b	80	82.051	Labrus_bergylta
ENSFDAG00000008954	LSM12	96	84.756	ENSLACG00000015981	LSM12	81	84.756	Latimeria_chalumnae
ENSFDAG00000008954	LSM12	87	84.459	ENSLOCG00000013079	lsm12b	75	84.459	Lepisosteus_oculatus
ENSFDAG00000008954	LSM12	87	99.324	ENSLAFG00000005202	LSM12	76	99.324	Loxodonta_africana
ENSFDAG00000008954	LSM12	87	99.324	ENSMFAG00000031376	LSM12	81	97.297	Macaca_fascicularis
ENSFDAG00000008954	LSM12	87	99.324	ENSMMUG00000006804	LSM12	81	97.297	Macaca_mulatta
ENSFDAG00000008954	LSM12	51	85.057	ENSMMUG00000042106	-	79	85.057	Macaca_mulatta
ENSFDAG00000008954	LSM12	51	85.057	ENSMMUG00000038408	-	79	85.057	Macaca_mulatta
ENSFDAG00000008954	LSM12	87	99.324	ENSMNEG00000030594	-	81	97.297	Macaca_nemestrina
ENSFDAG00000008954	LSM12	87	99.324	ENSMLEG00000039934	LSM12	81	97.297	Mandrillus_leucophaeus
ENSFDAG00000008954	LSM12	91	81.410	ENSMAMG00000004279	lsm12b	80	81.410	Mastacembelus_armatus
ENSFDAG00000008954	LSM12	91	81.410	ENSMZEG00005005754	lsm12b	80	81.410	Maylandia_zebra
ENSFDAG00000008954	LSM12	87	98.649	ENSMICG00000037219	LSM12	81	96.396	Microcebus_murinus
ENSFDAG00000008954	LSM12	87	80.405	ENSMOCG00000017015	-	64	80.405	Microtus_ochrogaster
ENSFDAG00000008954	LSM12	87	99.324	ENSMOCG00000019878	-	81	97.297	Microtus_ochrogaster
ENSFDAG00000008954	LSM12	87	85.811	ENSMMOG00000020848	lsm12b	76	85.811	Mola_mola
ENSFDAG00000008954	LSM12	91	82.051	ENSMALG00000007578	lsm12b	80	82.051	Monopterus_albus
ENSFDAG00000008954	LSM12	87	98.649	MGP_CAROLIEiJ_G0017241	Lsm12	81	96.396	Mus_caroli
ENSFDAG00000008954	LSM12	87	99.324	ENSMUSG00000020922	Lsm12	81	97.297	Mus_musculus
ENSFDAG00000008954	LSM12	87	89.091	MGP_PahariEiJ_G0018371	Lsm12	81	97.297	Mus_pahari
ENSFDAG00000008954	LSM12	87	98.649	MGP_SPRETEiJ_G0018084	Lsm12	79	99.074	Mus_spretus
ENSFDAG00000008954	LSM12	87	98.649	ENSMLUG00000006391	LSM12	76	98.649	Myotis_lucifugus
ENSFDAG00000008954	LSM12	96	68.293	ENSNGAG00000015429	-	84	68.293	Nannospalax_galili
ENSFDAG00000008954	LSM12	87	99.324	ENSNGAG00000001870	Lsm12	81	97.297	Nannospalax_galili
ENSFDAG00000008954	LSM12	91	81.410	ENSNBRG00000006266	lsm12b	80	81.410	Neolamprologus_brichardi
ENSFDAG00000008954	LSM12	87	99.324	ENSNLEG00000005580	-	81	97.297	Nomascus_leucogenys
ENSFDAG00000008954	LSM12	69	97.458	ENSMEUG00000007501	-	72	97.458	Notamacropus_eugenii
ENSFDAG00000008954	LSM12	87	99.324	ENSOPRG00000008552	LSM12	76	99.324	Ochotona_princeps
ENSFDAG00000008954	LSM12	87	97.973	ENSODEG00000017998	-	81	95.495	Octodon_degus
ENSFDAG00000008954	LSM12	84	90.909	ENSODEG00000007886	-	57	90.909	Octodon_degus
ENSFDAG00000008954	LSM12	91	81.410	ENSONIG00000007933	lsm12b	80	81.410	Oreochromis_niloticus
ENSFDAG00000008954	LSM12	86	91.837	ENSOCUG00000024823	-	76	91.837	Oryctolagus_cuniculus
ENSFDAG00000008954	LSM12	87	99.324	ENSOCUG00000008566	-	75	99.324	Oryctolagus_cuniculus
ENSFDAG00000008954	LSM12	86	93.878	ENSOCUG00000027889	-	76	93.878	Oryctolagus_cuniculus
ENSFDAG00000008954	LSM12	86	92.517	ENSOCUG00000021254	-	76	92.517	Oryctolagus_cuniculus
ENSFDAG00000008954	LSM12	91	81.410	ENSORLG00000011310	lsm12b	80	81.410	Oryzias_latipes
ENSFDAG00000008954	LSM12	91	81.410	ENSORLG00020002060	lsm12b	73	81.410	Oryzias_latipes_hni
ENSFDAG00000008954	LSM12	91	81.410	ENSORLG00015001647	lsm12b	73	81.410	Oryzias_latipes_hsok
ENSFDAG00000008954	LSM12	91	81.410	ENSOMEG00000006184	lsm12b	73	81.410	Oryzias_melastigma
ENSFDAG00000008954	LSM12	87	98.649	ENSOGAG00000010489	LSM12	76	98.649	Otolemur_garnettii
ENSFDAG00000008954	LSM12	87	99.324	ENSOARG00000006589	LSM12	74	99.324	Ovis_aries
ENSFDAG00000008954	LSM12	87	99.324	ENSPPAG00000034974	-	80	99.324	Pan_paniscus
ENSFDAG00000008954	LSM12	87	99.324	ENSPPRG00000023420	LSM12	76	99.324	Panthera_pardus
ENSFDAG00000008954	LSM12	65	95.495	ENSPTIG00000014850	-	81	95.495	Panthera_tigris_altaica
ENSFDAG00000008954	LSM12	87	99.324	ENSPTIG00000012704	-	79	99.324	Panthera_tigris_altaica
ENSFDAG00000008954	LSM12	87	99.324	ENSPTRG00000009261	LSM12	81	97.297	Pan_troglodytes
ENSFDAG00000008954	LSM12	87	99.324	ENSPANG00000021315	-	81	97.297	Papio_anubis
ENSFDAG00000008954	LSM12	91	82.051	ENSPKIG00000021058	lsm12b	80	82.051	Paramormyrops_kingsleyae
ENSFDAG00000008954	LSM12	87	76.351	ENSPKIG00000017932	-	76	76.351	Paramormyrops_kingsleyae
ENSFDAG00000008954	LSM12	91	81.410	ENSPMGG00000021344	lsm12b	80	81.410	Periophthalmus_magnuspinnatus
ENSFDAG00000008954	LSM12	87	99.324	ENSPEMG00000012199	Lsm12	81	97.297	Peromyscus_maniculatus_bairdii
ENSFDAG00000008954	LSM12	74	64.567	ENSPMAG00000005461	lsm12a	73	64.567	Petromyzon_marinus
ENSFDAG00000008954	LSM12	87	95.946	ENSPCIG00000020244	LSM12	76	95.946	Phascolarctos_cinereus
ENSFDAG00000008954	LSM12	91	79.487	ENSPFOG00000015930	lsm12b	80	79.487	Poecilia_formosa
ENSFDAG00000008954	LSM12	91	79.487	ENSPLAG00000021089	lsm12b	80	79.487	Poecilia_latipinna
ENSFDAG00000008954	LSM12	91	79.487	ENSPMEG00000012961	lsm12b	80	79.487	Poecilia_mexicana
ENSFDAG00000008954	LSM12	91	80.769	ENSPREG00000010236	lsm12b	87	80.769	Poecilia_reticulata
ENSFDAG00000008954	LSM12	87	99.324	ENSPPYG00000008344	LSM12	76	99.324	Pongo_abelii
ENSFDAG00000008954	LSM12	69	100.000	ENSPCAG00000008790	LSM12	74	100.000	Procavia_capensis
ENSFDAG00000008954	LSM12	87	99.324	ENSPCOG00000027951	LSM12	81	97.297	Propithecus_coquereli
ENSFDAG00000008954	LSM12	87	98.649	ENSPVAG00000013706	LSM12	76	98.649	Pteropus_vampyrus
ENSFDAG00000008954	LSM12	91	81.410	ENSPNYG00000003386	lsm12b	80	81.410	Pundamilia_nyererei
ENSFDAG00000008954	LSM12	87	79.054	ENSPNAG00000018435	lsm12a	76	79.054	Pygocentrus_nattereri
ENSFDAG00000008954	LSM12	91	79.487	ENSPNAG00000004186	lsm12b	80	79.487	Pygocentrus_nattereri
ENSFDAG00000008954	LSM12	87	99.324	ENSRNOG00000020894	Lsm12	76	99.324	Rattus_norvegicus
ENSFDAG00000008954	LSM12	87	99.324	ENSRBIG00000027910	LSM12	81	97.297	Rhinopithecus_bieti
ENSFDAG00000008954	LSM12	68	81.897	ENSRROG00000000537	-	80	81.897	Rhinopithecus_roxellana
ENSFDAG00000008954	LSM12	87	99.324	ENSRROG00000045530	-	81	97.297	Rhinopithecus_roxellana
ENSFDAG00000008954	LSM12	69	32.061	YHR121W	-	68	32.061	Saccharomyces_cerevisiae
ENSFDAG00000008954	LSM12	87	99.324	ENSSBOG00000025310	LSM12	81	97.297	Saimiri_boliviensis_boliviensis
ENSFDAG00000008954	LSM12	87	95.946	ENSSHAG00000014914	LSM12	94	95.946	Sarcophilus_harrisii
ENSFDAG00000008954	LSM12	91	83.333	ENSSFOG00015009612	lsm12	80	83.333	Scleropages_formosus
ENSFDAG00000008954	LSM12	87	83.784	ENSSFOG00015020392	lsm12a	76	83.784	Scleropages_formosus
ENSFDAG00000008954	LSM12	91	82.051	ENSSMAG00000008089	lsm12b	80	82.051	Scophthalmus_maximus
ENSFDAG00000008954	LSM12	91	82.692	ENSSDUG00000012711	lsm12b	80	82.692	Seriola_dumerili
ENSFDAG00000008954	LSM12	91	82.692	ENSSLDG00000007404	lsm12b	80	82.692	Seriola_lalandi_dorsalis
ENSFDAG00000008954	LSM12	87	98.649	ENSSARG00000005537	LSM12	97	98.649	Sorex_araneus
ENSFDAG00000008954	LSM12	87	94.595	ENSSPUG00000011984	LSM12	76	94.595	Sphenodon_punctatus
ENSFDAG00000008954	LSM12	91	82.051	ENSSPAG00000017058	lsm12b	80	82.051	Stegastes_partitus
ENSFDAG00000008954	LSM12	87	99.324	ENSSSCG00000032394	LSM12	76	99.324	Sus_scrofa
ENSFDAG00000008954	LSM12	91	80.128	ENSTRUG00000007121	lsm12b	80	80.128	Takifugu_rubripes
ENSFDAG00000008954	LSM12	91	80.769	ENSTNIG00000014436	lsm12b	80	80.769	Tetraodon_nigroviridis
ENSFDAG00000008954	LSM12	86	95.238	ENSTBEG00000012392	-	75	95.238	Tupaia_belangeri
ENSFDAG00000008954	LSM12	87	98.649	ENSTBEG00000012523	-	76	98.649	Tupaia_belangeri
ENSFDAG00000008954	LSM12	87	99.324	ENSTTRG00000010433	LSM12	76	99.324	Tursiops_truncatus
ENSFDAG00000008954	LSM12	87	99.324	ENSUAMG00000006313	LSM12	92	99.324	Ursus_americanus
ENSFDAG00000008954	LSM12	87	99.324	ENSUMAG00000012987	LSM12	84	99.324	Ursus_maritimus
ENSFDAG00000008954	LSM12	87	91.892	ENSVPAG00000011145	LSM12	76	91.892	Vicugna_pacos
ENSFDAG00000008954	LSM12	87	99.324	ENSVVUG00000017581	LSM12	76	99.324	Vulpes_vulpes
ENSFDAG00000008954	LSM12	85	66.438	ENSXETG00000003371	lsm12	72	66.438	Xenopus_tropicalis
ENSFDAG00000008954	LSM12	91	80.769	ENSXCOG00000003994	lsm12b	80	80.769	Xiphophorus_couchianus
ENSFDAG00000008954	LSM12	91	80.769	ENSXMAG00000020950	lsm12b	80	80.769	Xiphophorus_maculatus