EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000008973 (Gene tree)
Gene ID: 104859405
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 5866 bases
Position: chrKN121895.1:3335262-3341127
Accession: 104859405
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000019685	RNA_ligase	PF09414.10	7.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000012543	LIG4-201	3452	XM_010619981	ENSFDAP00000019685	911 (aa)	XP_010618283	UPI00053FAD93

Gene Model

Click here to download ENSFDAG00000008973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000008973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000008973	LIG4	100	89.682	ENSG00000174405	LIG4	100	89.682	Homo_sapiens
ENSFDAG00000008973	LIG4	99	64.505	ENSAPOG00000000866	lig4	99	64.725	Acanthochromis_polyacanthus
ENSFDAG00000008973	LIG4	100	86.608	ENSAMEG00000019685	LIG4	99	86.608	Ailuropoda_melanoleuca
ENSFDAG00000008973	LIG4	99	65.237	ENSACIG00000018309	lig4	99	65.457	Amphilophus_citrinellus
ENSFDAG00000008973	LIG4	99	64.286	ENSAOCG00000011768	lig4	99	64.505	Amphiprion_ocellaris
ENSFDAG00000008973	LIG4	99	64.396	ENSAPEG00000017815	lig4	99	64.615	Amphiprion_percula
ENSFDAG00000008973	LIG4	99	64.097	ENSATEG00000005583	lig4	99	64.207	Anabas_testudineus
ENSFDAG00000008973	LIG4	97	74.432	ENSAPLG00000001673	LIG4	99	74.432	Anas_platyrhynchos
ENSFDAG00000008973	LIG4	99	74.197	ENSACAG00000014566	LIG4	99	74.197	Anolis_carolinensis
ENSFDAG00000008973	LIG4	100	88.364	ENSANAG00000012446	LIG4	100	88.364	Aotus_nancymaae
ENSFDAG00000008973	LIG4	99	64.246	ENSACLG00000027051	lig4	99	64.246	Astatotilapia_calliptera
ENSFDAG00000008973	LIG4	99	63.567	ENSAMXG00000008192	lig4	94	63.567	Astyanax_mexicanus
ENSFDAG00000008973	LIG4	100	87.596	ENSBTAG00000015868	LIG4	100	87.596	Bos_taurus
ENSFDAG00000008973	LIG4	100	87.816	ENSCJAG00000014689	LIG4	100	87.816	Callithrix_jacchus
ENSFDAG00000008973	LIG4	100	88.364	ENSCAFG00000006031	LIG4	100	88.364	Canis_familiaris
ENSFDAG00000008973	LIG4	100	88.364	ENSCAFG00020021230	LIG4	100	88.364	Canis_lupus_dingo
ENSFDAG00000008973	LIG4	100	87.267	ENSCHIG00000001019	LIG4	100	87.267	Capra_hircus
ENSFDAG00000008973	LIG4	99	91.362	ENSCAPG00000006284	LIG4	99	91.362	Cavia_aperea
ENSFDAG00000008973	LIG4	100	91.328	ENSCPOG00000014266	LIG4	100	91.328	Cavia_porcellus
ENSFDAG00000008973	LIG4	100	89.133	ENSCCAG00000019971	LIG4	100	89.133	Cebus_capucinus
ENSFDAG00000008973	LIG4	100	89.133	ENSCATG00000021075	LIG4	100	89.133	Cercocebus_atys
ENSFDAG00000008973	LIG4	100	92.206	ENSCLAG00000003376	LIG4	100	92.206	Chinchilla_lanigera
ENSFDAG00000008973	LIG4	100	89.352	ENSCSAG00000000211	LIG4	100	89.352	Chlorocebus_sabaeus
ENSFDAG00000008973	LIG4	99	77.594	ENSCPBG00000023291	LIG4	100	77.015	Chrysemys_picta_bellii
ENSFDAG00000008973	LIG4	68	45.787	ENSCING00000009536	-	95	45.787	Ciona_intestinalis
ENSFDAG00000008973	LIG4	83	46.518	ENSCSAVG00000010336	-	98	46.518	Ciona_savignyi
ENSFDAG00000008973	LIG4	100	89.462	ENSCANG00000005805	LIG4	100	89.462	Colobus_angolensis_palliatus
ENSFDAG00000008973	LIG4	100	85.965	ENSCGRG00001012072	Lig4	100	85.965	Cricetulus_griseus_chok1gshd
ENSFDAG00000008973	LIG4	100	85.965	ENSCGRG00000013417	Lig4	100	85.965	Cricetulus_griseus_crigri
ENSFDAG00000008973	LIG4	97	65.341	ENSCSEG00000013905	lig4	95	65.341	Cynoglossus_semilaevis
ENSFDAG00000008973	LIG4	99	64.341	ENSCVAG00000007896	lig4	99	64.341	Cyprinodon_variegatus
ENSFDAG00000008973	LIG4	99	63.455	ENSDARG00000060620	lig4	98	63.455	Danio_rerio
ENSFDAG00000008973	LIG4	100	87.939	ENSDNOG00000000513	LIG4	100	87.939	Dasypus_novemcinctus
ENSFDAG00000008973	LIG4	100	87.047	ENSDORG00000027303	Lig4	100	87.047	Dipodomys_ordii
ENSFDAG00000008973	LIG4	89	32.515	FBgn0030506	Lig4	91	32.515	Drosophila_melanogaster
ENSFDAG00000008973	LIG4	99	82.483	ENSETEG00000015563	LIG4	100	82.816	Echinops_telfairi
ENSFDAG00000008973	LIG4	99	43.861	ENSEBUG00000014243	lig4	99	43.861	Eptatretus_burgeri
ENSFDAG00000008973	LIG4	100	88.694	ENSEASG00005022073	LIG4	100	88.694	Equus_asinus_asinus
ENSFDAG00000008973	LIG4	100	88.145	ENSECAG00000003257	LIG4	100	88.145	Equus_caballus
ENSFDAG00000008973	LIG4	99	64.427	ENSELUG00000006787	lig4	99	64.537	Esox_lucius
ENSFDAG00000008973	LIG4	100	87.596	ENSFCAG00000031985	LIG4	100	87.596	Felis_catus
ENSFDAG00000008973	LIG4	89	75.031	ENSFALG00000004214	LIG4	98	75.031	Ficedula_albicollis
ENSFDAG00000008973	LIG4	99	63.898	ENSFHEG00000007398	lig4	89	64.120	Fundulus_heteroclitus
ENSFDAG00000008973	LIG4	85	64.056	ENSGMOG00000012843	lig4	99	64.056	Gadus_morhua
ENSFDAG00000008973	LIG4	100	73.690	ENSGALG00000016854	LIG4	100	73.690	Gallus_gallus
ENSFDAG00000008973	LIG4	99	63.808	ENSGAFG00000019779	lig4	95	63.736	Gambusia_affinis
ENSFDAG00000008973	LIG4	99	62.569	ENSGACG00000014135	lig4	99	62.569	Gasterosteus_aculeatus
ENSFDAG00000008973	LIG4	100	89.572	ENSGGOG00000027771	LIG4	100	89.572	Gorilla_gorilla
ENSFDAG00000008973	LIG4	99	64.026	ENSHBUG00000006245	lig4	99	64.026	Haplochromis_burtoni
ENSFDAG00000008973	LIG4	100	95.499	ENSHGLG00000000718	LIG4	100	95.499	Heterocephalus_glaber_female
ENSFDAG00000008973	LIG4	100	95.499	ENSHGLG00100003265	LIG4	100	95.499	Heterocephalus_glaber_male
ENSFDAG00000008973	LIG4	99	63.736	ENSHCOG00000012010	lig4	99	63.736	Hippocampus_comes
ENSFDAG00000008973	LIG4	99	64.725	ENSIPUG00000013748	lig4	99	64.725	Ictalurus_punctatus
ENSFDAG00000008973	LIG4	100	88.584	ENSSTOG00000024303	LIG4	100	88.584	Ictidomys_tridecemlineatus
ENSFDAG00000008973	LIG4	100	86.498	ENSJJAG00000006750	Lig4	100	86.498	Jaculus_jaculus
ENSFDAG00000008973	LIG4	99	64.230	ENSKMAG00000001149	lig4	99	64.230	Kryptolebias_marmoratus
ENSFDAG00000008973	LIG4	91	65.144	ENSLBEG00000014578	lig4	100	65.385	Labrus_bergylta
ENSFDAG00000008973	LIG4	99	71.350	ENSLACG00000003282	LIG4	99	71.350	Latimeria_chalumnae
ENSFDAG00000008973	LIG4	99	68.833	ENSLOCG00000008901	lig4	98	68.833	Lepisosteus_oculatus
ENSFDAG00000008973	LIG4	100	85.652	ENSLAFG00000031152	LIG4	100	85.652	Loxodonta_africana
ENSFDAG00000008973	LIG4	100	89.352	ENSMFAG00000037235	LIG4	100	89.352	Macaca_fascicularis
ENSFDAG00000008973	LIG4	100	89.352	ENSMMUG00000008874	LIG4	100	89.352	Macaca_mulatta
ENSFDAG00000008973	LIG4	100	89.352	ENSMNEG00000023575	LIG4	100	89.352	Macaca_nemestrina
ENSFDAG00000008973	LIG4	100	89.023	ENSMLEG00000026720	LIG4	100	89.023	Mandrillus_leucophaeus
ENSFDAG00000008973	LIG4	99	64.835	ENSMAMG00000008472	lig4	99	65.055	Mastacembelus_armatus
ENSFDAG00000008973	LIG4	99	64.246	ENSMZEG00005001855	lig4	99	64.246	Maylandia_zebra
ENSFDAG00000008973	LIG4	100	74.236	ENSMGAG00000015532	LIG4	100	74.236	Meleagris_gallopavo
ENSFDAG00000008973	LIG4	100	83.864	ENSMOCG00000019000	Lig4	100	83.864	Microtus_ochrogaster
ENSFDAG00000008973	LIG4	99	64.341	ENSMMOG00000004390	lig4	99	64.341	Mola_mola
ENSFDAG00000008973	LIG4	100	81.998	ENSMODG00000025064	LIG4	100	81.998	Monodelphis_domestica
ENSFDAG00000008973	LIG4	99	64.452	ENSMALG00000008555	lig4	99	64.452	Monopterus_albus
ENSFDAG00000008973	LIG4	100	85.071	MGP_CAROLIEiJ_G0030809	Lig4	100	85.071	Mus_caroli
ENSFDAG00000008973	LIG4	100	85.401	ENSMUSG00000049717	Lig4	100	85.401	Mus_musculus
ENSFDAG00000008973	LIG4	100	85.181	MGP_PahariEiJ_G0021270	Lig4	100	85.181	Mus_pahari
ENSFDAG00000008973	LIG4	100	85.401	MGP_SPRETEiJ_G0031917	Lig4	100	85.401	Mus_spretus
ENSFDAG00000008973	LIG4	100	86.389	ENSMPUG00000018675	LIG4	100	86.389	Mustela_putorius_furo
ENSFDAG00000008973	LIG4	100	88.364	ENSMLUG00000001267	LIG4	100	88.364	Myotis_lucifugus
ENSFDAG00000008973	LIG4	100	85.840	ENSNGAG00000013258	Lig4	100	85.840	Nannospalax_galili
ENSFDAG00000008973	LIG4	99	64.356	ENSNBRG00000021252	lig4	99	64.356	Neolamprologus_brichardi
ENSFDAG00000008973	LIG4	100	89.243	ENSNLEG00000007888	LIG4	100	89.243	Nomascus_leucogenys
ENSFDAG00000008973	LIG4	100	85.950	ENSOPRG00000005765	LIG4	100	85.950	Ochotona_princeps
ENSFDAG00000008973	LIG4	100	91.328	ENSODEG00000019683	LIG4	100	91.328	Octodon_degus
ENSFDAG00000008973	LIG4	99	64.356	ENSONIG00000011969	lig4	98	64.576	Oreochromis_niloticus
ENSFDAG00000008973	LIG4	100	88.804	ENSOCUG00000015734	LIG4	100	88.804	Oryctolagus_cuniculus
ENSFDAG00000008973	LIG4	99	63.077	ENSORLG00000004041	lig4	99	63.297	Oryzias_latipes
ENSFDAG00000008973	LIG4	99	63.846	ENSORLG00020019607	lig4	99	64.066	Oryzias_latipes_hni
ENSFDAG00000008973	LIG4	99	63.626	ENSORLG00015017754	lig4	99	63.846	Oryzias_latipes_hsok
ENSFDAG00000008973	LIG4	74	68.787	ENSOMEG00000003459	lig4	98	68.787	Oryzias_melastigma
ENSFDAG00000008973	LIG4	100	88.268	ENSOGAG00000032120	LIG4	99	88.268	Otolemur_garnettii
ENSFDAG00000008973	LIG4	82	88.456	ENSOARG00000005590	LIG4	98	88.456	Ovis_aries
ENSFDAG00000008973	LIG4	100	89.243	ENSPPAG00000032998	LIG4	100	89.243	Pan_paniscus
ENSFDAG00000008973	LIG4	100	88.145	ENSPPRG00000017804	LIG4	100	88.145	Panthera_pardus
ENSFDAG00000008973	LIG4	100	88.035	ENSPTIG00000010051	LIG4	100	88.035	Panthera_tigris_altaica
ENSFDAG00000008973	LIG4	100	89.352	ENSPTRG00000006025	LIG4	100	89.352	Pan_troglodytes
ENSFDAG00000008973	LIG4	100	89.243	ENSPANG00000007562	LIG4	100	89.243	Papio_anubis
ENSFDAG00000008973	LIG4	99	65.532	ENSPKIG00000011645	lig4	98	65.532	Paramormyrops_kingsleyae
ENSFDAG00000008973	LIG4	99	77.143	ENSPSIG00000001504	LIG4	99	77.143	Pelodiscus_sinensis
ENSFDAG00000008973	LIG4	99	62.333	ENSPMGG00000013486	lig4	99	61.910	Periophthalmus_magnuspinnatus
ENSFDAG00000008973	LIG4	100	86.075	ENSPEMG00000000076	Lig4	100	86.075	Peromyscus_maniculatus_bairdii
ENSFDAG00000008973	LIG4	100	83.004	ENSPCIG00000021882	LIG4	100	83.004	Phascolarctos_cinereus
ENSFDAG00000008973	LIG4	99	63.737	ENSPFOG00000000797	lig4	99	63.736	Poecilia_formosa
ENSFDAG00000008973	LIG4	99	63.626	ENSPLAG00000001196	lig4	99	63.626	Poecilia_latipinna
ENSFDAG00000008973	LIG4	99	63.849	ENSPMEG00000021353	lig4	99	63.846	Poecilia_mexicana
ENSFDAG00000008973	LIG4	99	63.404	ENSPREG00000007323	lig4	99	63.297	Poecilia_reticulata
ENSFDAG00000008973	LIG4	100	89.791	ENSPPYG00000005540	LIG4	100	89.791	Pongo_abelii
ENSFDAG00000008973	LIG4	100	88.145	ENSPVAG00000016403	LIG4	100	88.145	Pteropus_vampyrus
ENSFDAG00000008973	LIG4	99	64.136	ENSPNYG00000009660	lig4	99	64.136	Pundamilia_nyererei
ENSFDAG00000008973	LIG4	100	63.965	ENSPNAG00000028056	lig4	100	63.965	Pygocentrus_nattereri
ENSFDAG00000008973	LIG4	100	63.965	ENSPNAG00000028069	LIG4	100	63.965	Pygocentrus_nattereri
ENSFDAG00000008973	LIG4	100	84.193	ENSRNOG00000014605	Lig4	100	84.193	Rattus_norvegicus
ENSFDAG00000008973	LIG4	100	88.364	ENSRBIG00000039962	LIG4	100	88.364	Rhinopithecus_bieti
ENSFDAG00000008973	LIG4	100	89.572	ENSRROG00000006040	LIG4	100	89.572	Rhinopithecus_roxellana
ENSFDAG00000008973	LIG4	100	87.925	ENSSBOG00000019029	LIG4	100	87.925	Saimiri_boliviensis_boliviensis
ENSFDAG00000008973	LIG4	100	78.924	ENSSHAG00000009525	LIG4	100	79.386	Sarcophilus_harrisii
ENSFDAG00000008973	LIG4	100	64.301	ENSSFOG00015012835	lig4	100	64.301	Scleropages_formosus
ENSFDAG00000008973	LIG4	99	61.573	ENSSMAG00000011267	lig4	99	61.573	Scophthalmus_maximus
ENSFDAG00000008973	LIG4	99	64.856	ENSSDUG00000010343	lig4	98	64.856	Seriola_dumerili
ENSFDAG00000008973	LIG4	99	63.077	ENSSLDG00000003239	lig4	99	63.077	Seriola_lalandi_dorsalis
ENSFDAG00000008973	LIG4	100	81.619	ENSSARG00000006573	LIG4	100	81.619	Sorex_araneus
ENSFDAG00000008973	LIG4	93	77.014	ENSSPUG00000002444	LIG4	100	77.014	Sphenodon_punctatus
ENSFDAG00000008973	LIG4	99	64.396	ENSSPAG00000001609	lig4	99	64.396	Stegastes_partitus
ENSFDAG00000008973	LIG4	100	85.730	ENSSSCG00000009540	LIG4	100	85.730	Sus_scrofa
ENSFDAG00000008973	LIG4	99	74.226	ENSTGUG00000010795	LIG4	99	74.226	Taeniopygia_guttata
ENSFDAG00000008973	LIG4	99	64.286	ENSTRUG00000009984	lig4	99	64.286	Takifugu_rubripes
ENSFDAG00000008973	LIG4	99	64.835	ENSTNIG00000010348	lig4	99	65.165	Tetraodon_nigroviridis
ENSFDAG00000008973	LIG4	100	87.925	ENSTBEG00000017741	LIG4	100	87.925	Tupaia_belangeri
ENSFDAG00000008973	LIG4	100	88.474	ENSTTRG00000012660	LIG4	100	88.474	Tursiops_truncatus
ENSFDAG00000008973	LIG4	100	86.718	ENSUAMG00000003773	LIG4	100	86.718	Ursus_americanus
ENSFDAG00000008973	LIG4	99	70.925	ENSXETG00000002654	lig4	99	70.925	Xenopus_tropicalis
ENSFDAG00000008973	LIG4	99	63.849	ENSXCOG00000017401	lig4	99	63.407	Xiphophorus_couchianus
ENSFDAG00000008973	LIG4	99	63.849	ENSXMAG00000015142	lig4	99	63.407	Xiphophorus_maculatus