EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000009117 (Gene tree)
Gene ID: 104870697
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 216739 bases
Position: chrKN122816.1:769035-985773
Accession: 104870697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000019495	KH_1	PF00013.29	1.1e-55	1	3
ENSFDAP00000019495	KH_1	PF00013.29	1.1e-55	2	3
ENSFDAP00000019495	KH_1	PF00013.29	1.1e-55	3	3
ENSFDAP00000019500	KH_1	PF00013.29	1.3e-55	1	3
ENSFDAP00000019500	KH_1	PF00013.29	1.3e-55	2	3
ENSFDAP00000019500	KH_1	PF00013.29	1.3e-55	3	3
ENSFDAP00000019502	KH_1	PF00013.29	4.2e-48	1	3
ENSFDAP00000019502	KH_1	PF00013.29	4.2e-48	2	3
ENSFDAP00000019502	KH_1	PF00013.29	4.2e-48	3	3
ENSFDAP00000019500	KH_2	PF07650.17	1.6e-15	1	1
ENSFDAP00000019495	KH_2	PF07650.17	1.7e-15	1	1
ENSFDAP00000019502	KH_2	PF07650.17	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000012748	PCBP3-203	3070	XM_010636400	ENSFDAP00000019495	351 (aa)	XP_010634702	-
ENSFDAT00000012706	PCBP3-201	1089	-	ENSFDAP00000019502	362 (aa)	-	-
ENSFDAT00000012708	PCBP3-202	1116	XM_010636398	ENSFDAP00000019500	371 (aa)	XP_010634700	-

Gene Model

Click here to download ENSFDAG00000009117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000009117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000009117	PCBP3	91	62.112	ENSFDAG00000017467	-	99	62.112
ENSFDAG00000009117	PCBP3	80	41.270	ENSFDAG00000013466	FUBP3	78	41.270
ENSFDAG00000009117	PCBP3	59	40.625	ENSFDAG00000014210	FUBP1	51	40.625
ENSFDAG00000009117	PCBP3	86	33.577	ENSFDAG00000008156	IGF2BP3	59	33.577
ENSFDAG00000009117	PCBP3	74	51.515	ENSFDAG00000009114	-	62	51.515
ENSFDAG00000009117	PCBP3	70	54.545	ENSFDAG00000012548	HNRNPK	59	50.000
ENSFDAG00000009117	PCBP3	89	70.794	ENSFDAG00000021521	-	92	70.794
ENSFDAG00000009117	PCBP3	91	77.811	ENSFDAG00000003404	PCBP2	99	77.811
ENSFDAG00000009117	PCBP3	88	62.903	ENSFDAG00000012692	PCBP4	99	57.895
ENSFDAG00000009117	PCBP3	89	36.567	ENSFDAG00000015039	IGF2BP2	68	36.567
ENSFDAG00000009117	PCBP3	91	66.209	ENSFDAG00000019637	PCBP1	99	67.135
ENSFDAG00000009117	PCBP3	85	42.254	ENSFDAG00000007704	NOVA1	54	42.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000009117	PCBP3	100	97.305	ENSG00000183570	PCBP3	100	97.305	Homo_sapiens
ENSFDAG00000009117	PCBP3	91	76.471	ENSAPOG00000023735	zgc:110045	99	76.471	Acanthochromis_polyacanthus
ENSFDAG00000009117	PCBP3	91	67.560	ENSACIG00000002577	zgc:110045	96	73.934	Amphilophus_citrinellus
ENSFDAG00000009117	PCBP3	76	71.845	ENSAOCG00000005266	zgc:110045	97	72.115	Amphiprion_ocellaris
ENSFDAG00000009117	PCBP3	88	76.358	ENSAPEG00000000729	zgc:110045	72	76.358	Amphiprion_percula
ENSFDAG00000009117	PCBP3	85	72.444	ENSATEG00000011191	zgc:110045	65	72.444	Anabas_testudineus
ENSFDAG00000009117	PCBP3	88	76.997	ENSACLG00000019285	zgc:110045	72	76.997	Astatotilapia_calliptera
ENSFDAG00000009117	PCBP3	100	97.436	ENSBTAG00000030775	PCBP3	100	97.436	Bos_taurus
ENSFDAG00000009117	PCBP3	100	97.305	ENSCAFG00000011907	PCBP3	100	97.305	Canis_familiaris
ENSFDAG00000009117	PCBP3	99	95.810	ENSCHIG00000015841	PCBP3	98	95.640	Capra_hircus
ENSFDAG00000009117	PCBP3	80	83.817	ENSTSYG00000005254	PCBP3	94	84.519	Carlito_syrichta
ENSFDAG00000009117	PCBP3	100	77.135	ENSCAPG00000006767	PCBP3	91	78.049	Cavia_aperea
ENSFDAG00000009117	PCBP3	100	97.574	ENSCPOG00000003648	PCBP3	100	97.574	Cavia_porcellus
ENSFDAG00000009117	PCBP3	100	96.765	ENSCCAG00000024561	PCBP3	100	96.765	Cebus_capucinus
ENSFDAG00000009117	PCBP3	100	97.035	ENSCATG00000038419	PCBP3	100	97.035	Cercocebus_atys
ENSFDAG00000009117	PCBP3	100	97.844	ENSCLAG00000006667	PCBP3	100	97.844	Chinchilla_lanigera
ENSFDAG00000009117	PCBP3	100	96.765	ENSCANG00000026757	PCBP3	100	96.765	Colobus_angolensis_palliatus
ENSFDAG00000009117	PCBP3	100	97.844	ENSCGRG00001006836	Pcbp3	100	97.844	Cricetulus_griseus_chok1gshd
ENSFDAG00000009117	PCBP3	100	97.844	ENSCGRG00000001837	Pcbp3	100	97.844	Cricetulus_griseus_crigri
ENSFDAG00000009117	PCBP3	91	75.851	ENSCSEG00000010020	zgc:110045	99	75.851	Cynoglossus_semilaevis
ENSFDAG00000009117	PCBP3	73	74.874	ENSCVAG00000004726	zgc:110045	89	74.874	Cyprinodon_variegatus
ENSFDAG00000009117	PCBP3	76	77.778	ENSDARG00000057141	zgc:110045	94	77.778	Danio_rerio
ENSFDAG00000009117	PCBP3	99	94.550	ENSDNOG00000049518	PCBP3	100	94.550	Dasypus_novemcinctus
ENSFDAG00000009117	PCBP3	83	83.065	ENSDORG00000003640	Pcbp3	99	83.065	Dipodomys_ordii
ENSFDAG00000009117	PCBP3	85	75.336	ENSEBUG00000009697	zgc:110045	99	76.382	Eptatretus_burgeri
ENSFDAG00000009117	PCBP3	100	97.151	ENSEASG00005007068	PCBP3	100	97.151	Equus_asinus_asinus
ENSFDAG00000009117	PCBP3	100	97.151	ENSECAG00000012413	PCBP3	100	97.151	Equus_caballus
ENSFDAG00000009117	PCBP3	88	75.238	ENSELUG00000019784	zgc:110045	72	75.238	Esox_lucius
ENSFDAG00000009117	PCBP3	100	97.574	ENSFCAG00000014812	PCBP3	100	97.574	Felis_catus
ENSFDAG00000009117	PCBP3	91	65.407	ENSFHEG00000018838	-	92	73.632	Fundulus_heteroclitus
ENSFDAG00000009117	PCBP3	89	72.783	ENSGMOG00000005953	zgc:110045	98	72.783	Gadus_morhua
ENSFDAG00000009117	PCBP3	75	79.126	ENSGAFG00000017864	zgc:110045	91	79.126	Gambusia_affinis
ENSFDAG00000009117	PCBP3	91	75.617	ENSGACG00000003044	zgc:110045	99	75.617	Gasterosteus_aculeatus
ENSFDAG00000009117	PCBP3	100	97.035	ENSGGOG00000003683	PCBP3	100	97.035	Gorilla_gorilla
ENSFDAG00000009117	PCBP3	91	76.471	ENSHBUG00000012495	zgc:110045	99	76.471	Haplochromis_burtoni
ENSFDAG00000009117	PCBP3	99	97.554	ENSHGLG00000018620	PCBP3	99	97.554	Heterocephalus_glaber_female
ENSFDAG00000009117	PCBP3	99	97.554	ENSHGLG00100013590	PCBP3	99	97.554	Heterocephalus_glaber_male
ENSFDAG00000009117	PCBP3	89	67.619	ENSHCOG00000000818	zgc:110045	96	73.684	Hippocampus_comes
ENSFDAG00000009117	PCBP3	79	72.018	ENSIPUG00000003932	zgc:110045	81	72.018	Ictalurus_punctatus
ENSFDAG00000009117	PCBP3	100	97.574	ENSSTOG00000007178	PCBP3	100	97.574	Ictidomys_tridecemlineatus
ENSFDAG00000009117	PCBP3	100	98.113	ENSJJAG00000021192	Pcbp3	100	98.113	Jaculus_jaculus
ENSFDAG00000009117	PCBP3	72	80.952	ENSKMAG00000016179	-	90	80.952	Kryptolebias_marmoratus
ENSFDAG00000009117	PCBP3	91	70.326	ENSLBEG00000023074	zgc:110045	99	70.326	Labrus_bergylta
ENSFDAG00000009117	PCBP3	91	97.345	ENSLAFG00000020835	PCBP3	100	98.326	Loxodonta_africana
ENSFDAG00000009117	PCBP3	100	97.035	ENSMFAG00000034574	PCBP3	100	97.035	Macaca_fascicularis
ENSFDAG00000009117	PCBP3	100	97.035	ENSMMUG00000003825	PCBP3	100	97.035	Macaca_mulatta
ENSFDAG00000009117	PCBP3	100	97.035	ENSMNEG00000035551	PCBP3	100	99.687	Macaca_nemestrina
ENSFDAG00000009117	PCBP3	100	97.035	ENSMLEG00000038785	PCBP3	100	97.035	Mandrillus_leucophaeus
ENSFDAG00000009117	PCBP3	87	76.282	ENSMAMG00000014389	zgc:110045	99	76.282	Mastacembelus_armatus
ENSFDAG00000009117	PCBP3	88	76.997	ENSMZEG00005011785	zgc:110045	72	76.997	Maylandia_zebra
ENSFDAG00000009117	PCBP3	100	97.305	ENSMAUG00000007036	Pcbp3	100	97.305	Mesocricetus_auratus
ENSFDAG00000009117	PCBP3	100	96.496	ENSMICG00000012679	PCBP3	100	96.496	Microcebus_murinus
ENSFDAG00000009117	PCBP3	100	97.574	ENSMOCG00000016127	Pcbp3	100	97.574	Microtus_ochrogaster
ENSFDAG00000009117	PCBP3	69	80.556	ENSMMOG00000008399	zgc:110045	85	80.556	Mola_mola
ENSFDAG00000009117	PCBP3	79	75.648	ENSMALG00000008763	zgc:110045	92	76.440	Monopterus_albus
ENSFDAG00000009117	PCBP3	100	97.844	MGP_CAROLIEiJ_G0015475	Pcbp3	100	98.137	Mus_caroli
ENSFDAG00000009117	PCBP3	100	97.574	ENSMUSG00000001120	Pcbp3	100	97.574	Mus_musculus
ENSFDAG00000009117	PCBP3	100	97.844	MGP_PahariEiJ_G0030889	Pcbp3	100	98.137	Mus_pahari
ENSFDAG00000009117	PCBP3	100	97.844	MGP_SPRETEiJ_G0016288	Pcbp3	100	98.137	Mus_spretus
ENSFDAG00000009117	PCBP3	99	92.935	ENSMLUG00000003074	PCBP3	99	92.935	Myotis_lucifugus
ENSFDAG00000009117	PCBP3	100	97.035	ENSNGAG00000005416	Pcbp3	100	97.035	Nannospalax_galili
ENSFDAG00000009117	PCBP3	88	76.997	ENSNBRG00000017646	zgc:110045	72	76.997	Neolamprologus_brichardi
ENSFDAG00000009117	PCBP3	100	97.574	ENSNLEG00000002639	PCBP3	100	97.574	Nomascus_leucogenys
ENSFDAG00000009117	PCBP3	91	87.293	ENSMEUG00000012960	PCBP3	100	87.293	Notamacropus_eugenii
ENSFDAG00000009117	PCBP3	99	96.206	ENSODEG00000012873	PCBP3	100	96.206	Octodon_degus
ENSFDAG00000009117	PCBP3	88	76.997	ENSONIG00000010370	zgc:110045	76	76.997	Oreochromis_niloticus
ENSFDAG00000009117	PCBP3	86	90.288	ENSOANG00000006265	PCBP3	98	90.288	Ornithorhynchus_anatinus
ENSFDAG00000009117	PCBP3	88	76.358	ENSORLG00000014385	-	72	76.358	Oryzias_latipes
ENSFDAG00000009117	PCBP3	88	76.038	ENSORLG00020003139	zgc:110045	86	73.460	Oryzias_latipes_hni
ENSFDAG00000009117	PCBP3	88	76.038	ENSOMEG00000015459	-	72	76.038	Oryzias_melastigma
ENSFDAG00000009117	PCBP3	100	90.860	ENSOARG00000012704	PCBP3	100	90.860	Ovis_aries
ENSFDAG00000009117	PCBP3	100	97.035	ENSPPAG00000021940	PCBP3	100	97.035	Pan_paniscus
ENSFDAG00000009117	PCBP3	100	97.574	ENSPPRG00000003933	PCBP3	100	97.574	Panthera_pardus
ENSFDAG00000009117	PCBP3	100	82.888	ENSPTIG00000012038	PCBP3	100	83.827	Panthera_tigris_altaica
ENSFDAG00000009117	PCBP3	99	74.797	ENSPTRG00000014010	PCBP3	99	74.797	Pan_troglodytes
ENSFDAG00000009117	PCBP3	100	97.035	ENSPANG00000023631	PCBP3	100	97.035	Papio_anubis
ENSFDAG00000009117	PCBP3	88	64.907	ENSPMGG00000021588	-	72	64.907	Periophthalmus_magnuspinnatus
ENSFDAG00000009117	PCBP3	75	73.892	ENSPMGG00000022531	-	92	74.627	Periophthalmus_magnuspinnatus
ENSFDAG00000009117	PCBP3	100	97.844	ENSPEMG00000000587	Pcbp3	100	97.844	Peromyscus_maniculatus_bairdii
ENSFDAG00000009117	PCBP3	89	75.786	ENSPFOG00000002348	zgc:110045	98	75.786	Poecilia_formosa
ENSFDAG00000009117	PCBP3	75	75.243	ENSPLAG00000017488	zgc:110045	93	73.239	Poecilia_latipinna
ENSFDAG00000009117	PCBP3	87	75.244	ENSPMEG00000012762	zgc:110045	91	79.126	Poecilia_mexicana
ENSFDAG00000009117	PCBP3	86	77.273	ENSPREG00000001797	zgc:110045	94	77.358	Poecilia_reticulata
ENSFDAG00000009117	PCBP3	82	97.266	ENSPPYG00000011525	-	94	97.266	Pongo_abelii
ENSFDAG00000009117	PCBP3	91	73.654	ENSPCAG00000001454	PCBP3	100	76.000	Procavia_capensis
ENSFDAG00000009117	PCBP3	100	96.496	ENSPCOG00000013797	PCBP3	100	96.496	Propithecus_coquereli
ENSFDAG00000009117	PCBP3	82	89.565	ENSPVAG00000000832	PCBP3	83	89.565	Pteropus_vampyrus
ENSFDAG00000009117	PCBP3	83	73.709	ENSPNYG00000004637	zgc:110045	96	74.408	Pundamilia_nyererei
ENSFDAG00000009117	PCBP3	79	78.673	ENSPNAG00000004501	zgc:110045	94	78.673	Pygocentrus_nattereri
ENSFDAG00000009117	PCBP3	100	97.035	ENSRROG00000034567	PCBP3	100	97.035	Rhinopithecus_roxellana
ENSFDAG00000009117	PCBP3	100	96.496	ENSSBOG00000005789	PCBP3	100	96.496	Saimiri_boliviensis_boliviensis
ENSFDAG00000009117	PCBP3	88	76.358	ENSSMAG00000013541	zgc:110045	91	76.389	Scophthalmus_maximus
ENSFDAG00000009117	PCBP3	80	75.000	ENSSDUG00000019371	zgc:110045	66	75.000	Seriola_dumerili
ENSFDAG00000009117	PCBP3	88	76.677	ENSSLDG00000021064	zgc:110045	72	76.677	Seriola_lalandi_dorsalis
ENSFDAG00000009117	PCBP3	79	74.500	ENSSARG00000007629	-	100	74.752	Sorex_araneus
ENSFDAG00000009117	PCBP3	91	76.161	ENSSPAG00000000563	zgc:110045	99	76.161	Stegastes_partitus
ENSFDAG00000009117	PCBP3	100	97.436	ENSSSCG00000023041	PCBP3	100	97.436	Sus_scrofa
ENSFDAG00000009117	PCBP3	75	83.333	ENSTRUG00000017789	zgc:110045	92	83.333	Takifugu_rubripes
ENSFDAG00000009117	PCBP3	71	81.503	ENSTNIG00000003546	zgc:110045	85	81.503	Tetraodon_nigroviridis
ENSFDAG00000009117	PCBP3	66	77.253	ENSTBEG00000011882	-	73	77.253	Tupaia_belangeri
ENSFDAG00000009117	PCBP3	100	94.879	ENSUAMG00000006491	PCBP3	100	99.288	Ursus_americanus
ENSFDAG00000009117	PCBP3	100	85.600	ENSUMAG00000025403	PCBP3	100	85.600	Ursus_maritimus
ENSFDAG00000009117	PCBP3	99	90.217	ENSVVUG00000023862	PCBP3	100	86.000	Vulpes_vulpes
ENSFDAG00000009117	PCBP3	64	80.247	ENSXCOG00000005968	zgc:110045	82	80.247	Xiphophorus_couchianus
ENSFDAG00000009117	PCBP3	86	76.948	ENSXMAG00000008030	zgc:110045	71	76.948	Xiphophorus_maculatus