EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000009166 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 1093 bases
Position: chrKN124353.1:11024487-11025579
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000019434	RRM_1	PF00076.22	4.6e-16	1	2
ENSFDAP00000019434	RRM_1	PF00076.22	4.6e-16	2	2
ENSFDAP00000019434	HnRNPA1	PF11627.8	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000028060	-	807	-	ENSFDAP00000019434	268 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000009166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000009166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000009166	-	56	30.061	ENSFDAG00000016490	HNRNPAB	66	34.211
ENSFDAG00000009166	-	55	49.697	ENSFDAG00000019780	HNRNPA0	69	49.697
ENSFDAG00000009166	-	82	88.525	ENSFDAG00000021342	-	62	91.071
ENSFDAG00000009166	-	84	47.584	ENSFDAG00000000793	HNRNPA2B1	56	55.621
ENSFDAG00000009166	-	57	59.091	ENSFDAG00000018739	-	59	59.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000009166	-	89	46.324	ENSCAFG00000017424	-	59	53.012	Canis_familiaris
ENSFDAG00000009166	-	59	65.909	ENSCSAG00000000148	-	62	90.741	Chlorocebus_sabaeus
ENSFDAG00000009166	-	93	57.678	ENSCSAG00000004770	-	93	56.180	Chlorocebus_sabaeus
ENSFDAG00000009166	-	89	51.406	ENSDNOG00000036385	-	93	51.004	Dasypus_novemcinctus
ENSFDAG00000009166	-	85	51.867	ENSDNOG00000039025	-	100	49.378	Dasypus_novemcinctus
ENSFDAG00000009166	-	69	53.646	ENSDNOG00000037420	-	91	51.042	Dasypus_novemcinctus
ENSFDAG00000009166	-	62	45.509	ENSETEG00000005266	-	99	41.916	Echinops_telfairi
ENSFDAG00000009166	-	92	47.529	ENSETEG00000010614	-	93	47.148	Echinops_telfairi
ENSFDAG00000009166	-	100	52.249	ENSETEG00000007429	-	100	52.330	Echinops_telfairi
ENSFDAG00000009166	-	100	48.057	ENSETEG00000013374	-	100	46.643	Echinops_telfairi
ENSFDAG00000009166	-	87	54.545	ENSELUG00000020089	-	89	56.757	Esox_lucius
ENSFDAG00000009166	-	82	70.000	ENSNLEG00000034385	-	61	70.909	Nomascus_leucogenys
ENSFDAG00000009166	-	59	71.591	ENSOCUG00000022668	-	68	89.286	Oryctolagus_cuniculus
ENSFDAG00000009166	-	99	39.899	ENSOARG00000010092	-	76	47.674	Ovis_aries
ENSFDAG00000009166	-	99	72.222	ENSPPRG00000018110	-	99	69.203	Panthera_pardus
ENSFDAG00000009166	-	54	81.356	ENSRNOG00000046286	AABR07055878.1	72	76.623	Rattus_norvegicus
ENSFDAG00000009166	-	54	81.356	ENSRNOG00000050603	AABR07055875.1	72	76.623	Rattus_norvegicus