EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000009231 (Gene tree)
Gene ID: 104861401
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 14879 bases
Position: chrKN122054.1:6238590-6253468
Accession: 104861401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000019301	zf-U11-48K	PF05253.12	8.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000012875	SNRNP48-201	2435	XM_010622824	ENSFDAP00000019301	339 (aa)	XP_010621126	A0A091DU41

Gene Model

Click here to download ENSFDAG00000009231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000009231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000009231	SNRNP48	100	90.265	ENSG00000168566	SNRNP48	99	90.533	Homo_sapiens
ENSFDAG00000009231	SNRNP48	81	48.057	ENSAPOG00000021430	snrnp48	96	43.678	Acanthochromis_polyacanthus
ENSFDAG00000009231	SNRNP48	99	85.591	ENSAMEG00000017349	SNRNP48	100	85.591	Ailuropoda_melanoleuca
ENSFDAG00000009231	SNRNP48	88	45.545	ENSACIG00000002032	snrnp48	96	41.787	Amphilophus_citrinellus
ENSFDAG00000009231	SNRNP48	81	47.350	ENSAOCG00000010562	snrnp48	96	43.314	Amphiprion_ocellaris
ENSFDAG00000009231	SNRNP48	81	47.331	ENSAPEG00000003231	snrnp48	96	43.275	Amphiprion_percula
ENSFDAG00000009231	SNRNP48	91	45.171	ENSATEG00000020210	snrnp48	81	50.000	Anabas_testudineus
ENSFDAG00000009231	SNRNP48	85	61.409	ENSACAG00000002811	SNRNP48	91	60.333	Anolis_carolinensis
ENSFDAG00000009231	SNRNP48	100	89.676	ENSANAG00000033538	SNRNP48	99	89.941	Aotus_nancymaae
ENSFDAG00000009231	SNRNP48	94	46.319	ENSAMXG00000015309	snrnp48	98	45.349	Astyanax_mexicanus
ENSFDAG00000009231	SNRNP48	99	85.546	ENSBTAG00000001123	SNRNP48	99	86.136	Bos_taurus
ENSFDAG00000009231	SNRNP48	100	89.676	ENSCJAG00000021330	SNRNP48	99	89.941	Callithrix_jacchus
ENSFDAG00000009231	SNRNP48	99	88.060	ENSCAFG00000009574	SNRNP48	83	88.060	Canis_familiaris
ENSFDAG00000009231	SNRNP48	99	87.798	ENSCAFG00020013203	SNRNP48	99	88.060	Canis_lupus_dingo
ENSFDAG00000009231	SNRNP48	99	86.726	ENSCHIG00000015216	SNRNP48	99	87.316	Capra_hircus
ENSFDAG00000009231	SNRNP48	100	89.381	ENSTSYG00000000698	SNRNP48	99	89.645	Carlito_syrichta
ENSFDAG00000009231	SNRNP48	91	87.987	ENSCAPG00000006768	SNRNP48	99	88.274	Cavia_aperea
ENSFDAG00000009231	SNRNP48	100	92.920	ENSCPOG00000007910	SNRNP48	99	93.195	Cavia_porcellus
ENSFDAG00000009231	SNRNP48	100	88.201	ENSCCAG00000035652	SNRNP48	99	88.462	Cebus_capucinus
ENSFDAG00000009231	SNRNP48	100	89.971	ENSCATG00000033947	SNRNP48	99	90.237	Cercocebus_atys
ENSFDAG00000009231	SNRNP48	100	92.330	ENSCLAG00000003765	SNRNP48	99	92.604	Chinchilla_lanigera
ENSFDAG00000009231	SNRNP48	100	90.265	ENSCSAG00000007409	SNRNP48	99	90.533	Chlorocebus_sabaeus
ENSFDAG00000009231	SNRNP48	85	62.252	ENSCPBG00000019146	SNRNP48	92	62.252	Chrysemys_picta_bellii
ENSFDAG00000009231	SNRNP48	94	30.675	ENSCING00000004121	-	97	30.000	Ciona_intestinalis
ENSFDAG00000009231	SNRNP48	100	90.265	ENSCANG00000030017	SNRNP48	99	90.533	Colobus_angolensis_palliatus
ENSFDAG00000009231	SNRNP48	100	85.841	ENSCGRG00001001076	-	99	84.320	Cricetulus_griseus_chok1gshd
ENSFDAG00000009231	SNRNP48	99	69.254	ENSCGRG00001008805	-	95	68.060	Cricetulus_griseus_chok1gshd
ENSFDAG00000009231	SNRNP48	100	85.841	ENSCGRG00000007781	Snrnp48	99	84.320	Cricetulus_griseus_crigri
ENSFDAG00000009231	SNRNP48	77	48.669	ENSCSEG00000000722	snrnp48	78	46.831	Cynoglossus_semilaevis
ENSFDAG00000009231	SNRNP48	95	45.152	ENSCVAG00000019829	snrnp48	73	47.917	Cyprinodon_variegatus
ENSFDAG00000009231	SNRNP48	81	44.366	ENSDARG00000039989	snrnp48	96	41.642	Danio_rerio
ENSFDAG00000009231	SNRNP48	100	85.882	ENSDNOG00000014978	SNRNP48	99	86.136	Dasypus_novemcinctus
ENSFDAG00000009231	SNRNP48	100	87.941	ENSDORG00000015140	Snrnp48	100	87.941	Dipodomys_ordii
ENSFDAG00000009231	SNRNP48	100	88.791	ENSEASG00005012021	SNRNP48	100	88.791	Equus_asinus_asinus
ENSFDAG00000009231	SNRNP48	100	89.086	ENSECAG00000026937	SNRNP48	99	89.349	Equus_caballus
ENSFDAG00000009231	SNRNP48	100	65.882	ENSEEUG00000015437	SNRNP48	99	65.882	Erinaceus_europaeus
ENSFDAG00000009231	SNRNP48	91	46.519	ENSELUG00000009766	snrnp48	80	47.603	Esox_lucius
ENSFDAG00000009231	SNRNP48	100	88.496	ENSFCAG00000018853	SNRNP48	99	88.757	Felis_catus
ENSFDAG00000009231	SNRNP48	86	63.696	ENSFALG00000007797	SNRNP48	93	65.068	Ficedula_albicollis
ENSFDAG00000009231	SNRNP48	59	54.950	ENSFHEG00000014647	snrnp48	97	46.128	Fundulus_heteroclitus
ENSFDAG00000009231	SNRNP48	73	46.371	ENSGMOG00000018599	-	86	44.523	Gadus_morhua
ENSFDAG00000009231	SNRNP48	77	67.897	ENSGALG00000013005	SNRNP48	92	67.897	Gallus_gallus
ENSFDAG00000009231	SNRNP48	73	50.000	ENSGAFG00000021639	snrnp48	94	44.214	Gambusia_affinis
ENSFDAG00000009231	SNRNP48	71	50.826	ENSGACG00000017756	-	96	44.220	Gasterosteus_aculeatus
ENSFDAG00000009231	SNRNP48	83	61.745	ENSGAGG00000000865	SNRNP48	97	61.745	Gopherus_agassizii
ENSFDAG00000009231	SNRNP48	100	90.265	ENSGGOG00000013220	SNRNP48	99	90.533	Gorilla_gorilla
ENSFDAG00000009231	SNRNP48	76	47.893	ENSHBUG00000017066	snrnp48	96	42.735	Haplochromis_burtoni
ENSFDAG00000009231	SNRNP48	100	94.985	ENSHGLG00000015241	SNRNP48	100	94.985	Heterocephalus_glaber_female
ENSFDAG00000009231	SNRNP48	100	94.985	ENSHGLG00100010027	SNRNP48	100	94.985	Heterocephalus_glaber_male
ENSFDAG00000009231	SNRNP48	72	46.988	ENSHCOG00000014066	snrnp48	92	42.470	Hippocampus_comes
ENSFDAG00000009231	SNRNP48	100	92.035	ENSSTOG00000014635	SNRNP48	99	92.308	Ictidomys_tridecemlineatus
ENSFDAG00000009231	SNRNP48	99	83.432	ENSJJAG00000011495	Snrnp48	99	83.432	Jaculus_jaculus
ENSFDAG00000009231	SNRNP48	91	44.444	ENSKMAG00000016514	snrnp48	80	45.552	Kryptolebias_marmoratus
ENSFDAG00000009231	SNRNP48	81	48.746	ENSLBEG00000026249	snrnp48	97	45.115	Labrus_bergylta
ENSFDAG00000009231	SNRNP48	95	53.636	ENSLACG00000003958	SNRNP48	98	52.464	Latimeria_chalumnae
ENSFDAG00000009231	SNRNP48	83	51.389	ENSLOCG00000004187	snrnp48	95	48.665	Lepisosteus_oculatus
ENSFDAG00000009231	SNRNP48	100	85.251	ENSLAFG00000011152	SNRNP48	99	85.503	Loxodonta_africana
ENSFDAG00000009231	SNRNP48	100	90.560	ENSMFAG00000045216	SNRNP48	99	90.828	Macaca_fascicularis
ENSFDAG00000009231	SNRNP48	100	90.560	ENSMMUG00000014785	SNRNP48	99	90.828	Macaca_mulatta
ENSFDAG00000009231	SNRNP48	100	90.265	ENSMNEG00000042269	SNRNP48	99	90.533	Macaca_nemestrina
ENSFDAG00000009231	SNRNP48	100	90.560	ENSMLEG00000034004	SNRNP48	99	90.828	Mandrillus_leucophaeus
ENSFDAG00000009231	SNRNP48	76	47.148	ENSMAMG00000018673	snrnp48	83	43.353	Mastacembelus_armatus
ENSFDAG00000009231	SNRNP48	83	65.068	ENSMGAG00000006037	SNRNP48	99	64.726	Meleagris_gallopavo
ENSFDAG00000009231	SNRNP48	100	86.136	ENSMAUG00000011944	Snrnp48	99	84.615	Mesocricetus_auratus
ENSFDAG00000009231	SNRNP48	100	88.201	ENSMICG00000012497	SNRNP48	99	88.462	Microcebus_murinus
ENSFDAG00000009231	SNRNP48	100	85.841	ENSMOCG00000015555	Snrnp48	99	84.320	Microtus_ochrogaster
ENSFDAG00000009231	SNRNP48	54	52.432	ENSMMOG00000003072	-	58	52.432	Mola_mola
ENSFDAG00000009231	SNRNP48	98	68.605	ENSMODG00000009996	SNRNP48	93	68.605	Monodelphis_domestica
ENSFDAG00000009231	SNRNP48	74	49.606	ENSMALG00000005725	snrnp48	79	48.913	Monopterus_albus
ENSFDAG00000009231	SNRNP48	99	86.095	MGP_CAROLIEiJ_G0018441	Snrnp48	99	84.024	Mus_caroli
ENSFDAG00000009231	SNRNP48	99	85.503	ENSMUSG00000021431	Snrnp48	99	83.432	Mus_musculus
ENSFDAG00000009231	SNRNP48	99	85.503	MGP_PahariEiJ_G0019509	Snrnp48	99	83.432	Mus_pahari
ENSFDAG00000009231	SNRNP48	99	85.503	MGP_SPRETEiJ_G0019321	Snrnp48	99	83.432	Mus_spretus
ENSFDAG00000009231	SNRNP48	99	84.911	ENSNGAG00000004849	Snrnp48	99	84.911	Nannospalax_galili
ENSFDAG00000009231	SNRNP48	76	47.510	ENSNBRG00000012127	snrnp48	96	42.450	Neolamprologus_brichardi
ENSFDAG00000009231	SNRNP48	100	90.560	ENSNLEG00000011667	SNRNP48	99	90.828	Nomascus_leucogenys
ENSFDAG00000009231	SNRNP48	95	78.019	ENSOPRG00000015471	SNRNP48	100	77.709	Ochotona_princeps
ENSFDAG00000009231	SNRNP48	93	44.615	ENSONIG00000001520	snrnp48	96	42.045	Oreochromis_niloticus
ENSFDAG00000009231	SNRNP48	57	62.019	ENSOANG00000019888	-	100	62.019	Ornithorhynchus_anatinus
ENSFDAG00000009231	SNRNP48	81	88.278	ENSOCUG00000005168	SNRNP48	96	87.629	Oryctolagus_cuniculus
ENSFDAG00000009231	SNRNP48	88	47.727	ENSORLG00000015654	snrnp48	94	44.798	Oryzias_latipes
ENSFDAG00000009231	SNRNP48	88	46.429	ENSORLG00020015976	snrnp48	79	44.412	Oryzias_latipes_hni
ENSFDAG00000009231	SNRNP48	88	47.403	ENSORLG00015022379	snrnp48	81	45.087	Oryzias_latipes_hsok
ENSFDAG00000009231	SNRNP48	83	46.875	ENSOMEG00000022007	snrnp48	95	43.768	Oryzias_melastigma
ENSFDAG00000009231	SNRNP48	92	87.138	ENSOGAG00000005275	SNRNP48	96	87.382	Otolemur_garnettii
ENSFDAG00000009231	SNRNP48	84	86.316	ENSOARG00000017319	SNRNP48	99	86.316	Ovis_aries
ENSFDAG00000009231	SNRNP48	100	90.560	ENSPPAG00000032873	SNRNP48	99	90.828	Pan_paniscus
ENSFDAG00000009231	SNRNP48	100	88.791	ENSPPRG00000004283	SNRNP48	99	89.053	Panthera_pardus
ENSFDAG00000009231	SNRNP48	84	89.161	ENSPTIG00000013502	SNRNP48	99	89.474	Panthera_tigris_altaica
ENSFDAG00000009231	SNRNP48	100	90.560	ENSPTRG00000017703	SNRNP48	99	90.828	Pan_troglodytes
ENSFDAG00000009231	SNRNP48	100	90.560	ENSPANG00000000771	SNRNP48	99	90.828	Papio_anubis
ENSFDAG00000009231	SNRNP48	94	45.161	ENSPKIG00000013703	snrnp48	59	49.648	Paramormyrops_kingsleyae
ENSFDAG00000009231	SNRNP48	84	60.197	ENSPSIG00000002213	SNRNP48	94	60.535	Pelodiscus_sinensis
ENSFDAG00000009231	SNRNP48	72	48.571	ENSPMGG00000008120	snrnp48	86	48.571	Periophthalmus_magnuspinnatus
ENSFDAG00000009231	SNRNP48	100	86.136	ENSPEMG00000008872	Snrnp48	99	84.615	Peromyscus_maniculatus_bairdii
ENSFDAG00000009231	SNRNP48	73	51.793	ENSPFOG00000003578	snrnp48	93	45.723	Poecilia_formosa
ENSFDAG00000009231	SNRNP48	67	51.092	ENSPLAG00000002290	snrnp48	77	51.092	Poecilia_latipinna
ENSFDAG00000009231	SNRNP48	73	50.996	ENSPMEG00000018033	snrnp48	93	45.133	Poecilia_mexicana
ENSFDAG00000009231	SNRNP48	72	51.220	ENSPREG00000018541	snrnp48	93	45.133	Poecilia_reticulata
ENSFDAG00000009231	SNRNP48	100	89.086	ENSPPYG00000016209	SNRNP48	99	89.349	Pongo_abelii
ENSFDAG00000009231	SNRNP48	78	70.455	ENSPCAG00000011991	SNRNP48	99	70.455	Procavia_capensis
ENSFDAG00000009231	SNRNP48	100	87.021	ENSPVAG00000002854	SNRNP48	100	87.021	Pteropus_vampyrus
ENSFDAG00000009231	SNRNP48	76	48.276	ENSPNYG00000015399	snrnp48	92	46.939	Pundamilia_nyererei
ENSFDAG00000009231	SNRNP48	99	86.686	ENSRNOG00000013756	Snrnp48	99	84.615	Rattus_norvegicus
ENSFDAG00000009231	SNRNP48	91	90.554	ENSRBIG00000043856	SNRNP48	92	91.409	Rhinopithecus_bieti
ENSFDAG00000009231	SNRNP48	100	90.265	ENSRROG00000043229	SNRNP48	99	90.533	Rhinopithecus_roxellana
ENSFDAG00000009231	SNRNP48	100	89.676	ENSSBOG00000019486	SNRNP48	99	89.941	Saimiri_boliviensis_boliviensis
ENSFDAG00000009231	SNRNP48	98	69.186	ENSSHAG00000014483	SNRNP48	99	69.186	Sarcophilus_harrisii
ENSFDAG00000009231	SNRNP48	87	47.475	ENSSDUG00000014953	snrnp48	95	44.970	Seriola_dumerili
ENSFDAG00000009231	SNRNP48	88	46.844	ENSSLDG00000005989	snrnp48	95	44.315	Seriola_lalandi_dorsalis
ENSFDAG00000009231	SNRNP48	98	57.803	ENSSPUG00000006257	SNRNP48	95	57.803	Sphenodon_punctatus
ENSFDAG00000009231	SNRNP48	78	48.540	ENSSPAG00000006454	snrnp48	93	43.881	Stegastes_partitus
ENSFDAG00000009231	SNRNP48	83	63.918	ENSTGUG00000007575	SNRNP48	93	63.918	Taeniopygia_guttata
ENSFDAG00000009231	SNRNP48	73	49.801	ENSTRUG00000007031	snrnp48	82	49.291	Takifugu_rubripes
ENSFDAG00000009231	SNRNP48	91	42.949	ENSTNIG00000012977	-	90	41.515	Tetraodon_nigroviridis
ENSFDAG00000009231	SNRNP48	100	72.861	ENSTBEG00000015620	SNRNP48	100	72.861	Tupaia_belangeri
ENSFDAG00000009231	SNRNP48	100	84.956	ENSTTRG00000016715	SNRNP48	100	84.956	Tursiops_truncatus
ENSFDAG00000009231	SNRNP48	100	88.201	ENSUAMG00000003690	SNRNP48	99	88.462	Ursus_americanus
ENSFDAG00000009231	SNRNP48	84	83.916	ENSVPAG00000003557	SNRNP48	99	84.211	Vicugna_pacos
ENSFDAG00000009231	SNRNP48	99	87.500	ENSVVUG00000004996	SNRNP48	99	87.761	Vulpes_vulpes
ENSFDAG00000009231	SNRNP48	88	54.098	ENSXETG00000020447	snrnp48	97	48.521	Xenopus_tropicalis
ENSFDAG00000009231	SNRNP48	67	50.870	ENSXCOG00000004478	snrnp48	69	50.870	Xiphophorus_couchianus
ENSFDAG00000009231	SNRNP48	73	51.394	ENSXMAG00000013595	snrnp48	93	45.428	Xiphophorus_maculatus