EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000009234 (Gene tree)
Gene ID: 104852408
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 154562 bases
Position: chrKN124499.1:4086135-4240696
Accession: 104852408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000019347	RNA_bind	PF08675.11	2.9e-32	1	1
ENSFDAP00000019302	RNA_bind	PF08675.11	2.9e-32	1	1
ENSFDAP00000019347	CAF1	PF04857.20	4.8e-90	1	1
ENSFDAP00000019302	CAF1	PF04857.20	1.3e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000012865	PARN-201	1875	-	ENSFDAP00000019347	624 (aa)	-	-
ENSFDAT00000028081	PARN-202	3619	XM_010610022	ENSFDAP00000019302	637 (aa)	XP_010608324	UPI00053FC2A1

Gene Model

Click here to download ENSFDAG00000009234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000009234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000009234	PARN	100	90.610	ENSG00000140694	PARN	100	98.305	Homo_sapiens
ENSFDAG00000009234	PARN	100	88.889	ENSAMEG00000011208	PARN	100	88.889	Ailuropoda_melanoleuca
ENSFDAG00000009234	PARN	88	72.043	ENSACIG00000000619	parn	87	72.043	Amphilophus_citrinellus
ENSFDAG00000009234	PARN	90	74.216	ENSAOCG00000003465	parn	81	74.216	Amphiprion_ocellaris
ENSFDAG00000009234	PARN	76	75.615	ENSAPEG00000010661	parn	93	75.615	Amphiprion_percula
ENSFDAG00000009234	PARN	90	75.347	ENSATEG00000004661	parn	82	75.347	Anabas_testudineus
ENSFDAG00000009234	PARN	99	81.487	ENSAPLG00000013914	PARN	99	81.487	Anas_platyrhynchos
ENSFDAG00000009234	PARN	100	76.154	ENSACAG00000004973	PARN	100	77.217	Anolis_carolinensis
ENSFDAG00000009234	PARN	100	89.202	ENSANAG00000031516	PARN	100	98.305	Aotus_nancymaae
ENSFDAG00000009234	PARN	90	74.564	ENSACLG00000004742	parn	82	74.600	Astatotilapia_calliptera
ENSFDAG00000009234	PARN	90	72.906	ENSAMXG00000012390	parn	87	74.765	Astyanax_mexicanus
ENSFDAG00000009234	PARN	100	87.618	ENSBTAG00000018097	PARN	100	89.948	Bos_taurus
ENSFDAG00000009234	PARN	100	89.828	ENSCJAG00000015866	PARN	100	98.305	Callithrix_jacchus
ENSFDAG00000009234	PARN	100	89.185	ENSCAFG00000018795	PARN	100	89.185	Canis_familiaris
ENSFDAG00000009234	PARN	100	89.498	ENSCAFG00020024126	PARN	100	89.498	Canis_lupus_dingo
ENSFDAG00000009234	PARN	100	90.439	ENSCHIG00000018143	PARN	100	90.439	Capra_hircus
ENSFDAG00000009234	PARN	73	64.449	ENSCAPG00000007984	PARN	78	64.449	Cavia_aperea
ENSFDAG00000009234	PARN	100	93.407	ENSCPOG00000002263	PARN	100	93.407	Cavia_porcellus
ENSFDAG00000009234	PARN	100	89.828	ENSCCAG00000030367	PARN	100	98.305	Cebus_capucinus
ENSFDAG00000009234	PARN	90	95.538	ENSCATG00000041368	PARN	100	98.305	Cercocebus_atys
ENSFDAG00000009234	PARN	53	35.172	ENSCATG00000033196	PNLDC1	70	35.172	Cercocebus_atys
ENSFDAG00000009234	PARN	100	94.192	ENSCLAG00000015406	PARN	99	94.192	Chinchilla_lanigera
ENSFDAG00000009234	PARN	100	90.454	ENSCSAG00000008142	PARN	100	90.454	Chlorocebus_sabaeus
ENSFDAG00000009234	PARN	99	72.900	ENSCHOG00000007014	PARN	100	72.900	Choloepus_hoffmanni
ENSFDAG00000009234	PARN	89	82.686	ENSCPBG00000006609	PARN	98	82.689	Chrysemys_picta_bellii
ENSFDAG00000009234	PARN	82	44.465	ENSCING00000010142	-	99	44.361	Ciona_intestinalis
ENSFDAG00000009234	PARN	100	79.358	ENSCANG00000028849	-	100	98.305	Colobus_angolensis_palliatus
ENSFDAG00000009234	PARN	100	85.156	ENSCGRG00001012096	Parn	100	85.156	Cricetulus_griseus_chok1gshd
ENSFDAG00000009234	PARN	100	85.156	ENSCGRG00000004939	Parn	100	85.156	Cricetulus_griseus_crigri
ENSFDAG00000009234	PARN	95	69.601	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSFDAG00000009234	PARN	89	73.097	ENSCVAG00000014848	parn	79	77.425	Cyprinodon_variegatus
ENSFDAG00000009234	PARN	100	63.086	ENSDARG00000102634	parn	100	60.204	Danio_rerio
ENSFDAG00000009234	PARN	100	89.185	ENSDNOG00000000833	PARN	98	92.224	Dasypus_novemcinctus
ENSFDAG00000009234	PARN	74	90.114	ENSETEG00000014828	-	69	90.114	Echinops_telfairi
ENSFDAG00000009234	PARN	100	89.342	ENSEASG00005011400	PARN	100	89.342	Equus_asinus_asinus
ENSFDAG00000009234	PARN	100	89.185	ENSECAG00000017792	PARN	100	89.185	Equus_caballus
ENSFDAG00000009234	PARN	86	80.995	ENSEEUG00000010370	PARN	86	80.995	Erinaceus_europaeus
ENSFDAG00000009234	PARN	92	70.370	ENSELUG00000013139	parn	77	70.370	Esox_lucius
ENSFDAG00000009234	PARN	100	90.125	ENSFCAG00000044961	PARN	100	94.915	Felis_catus
ENSFDAG00000009234	PARN	99	81.616	ENSFALG00000003911	PARN	98	81.616	Ficedula_albicollis
ENSFDAG00000009234	PARN	92	66.833	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSFDAG00000009234	PARN	84	76.779	ENSGMOG00000003231	parn	97	76.779	Gadus_morhua
ENSFDAG00000009234	PARN	100	79.937	ENSGALG00000003091	PARN	100	79.937	Gallus_gallus
ENSFDAG00000009234	PARN	90	73.711	ENSGAFG00000011061	parn	84	73.064	Gambusia_affinis
ENSFDAG00000009234	PARN	92	71.022	ENSGACG00000019501	parn	100	67.643	Gasterosteus_aculeatus
ENSFDAG00000009234	PARN	55	74.788	ENSGAGG00000023281	PARN	90	74.504	Gopherus_agassizii
ENSFDAG00000009234	PARN	97	90.821	ENSGGOG00000025224	PARN	100	98.305	Gorilla_gorilla
ENSFDAG00000009234	PARN	90	74.739	ENSHBUG00000017906	parn	92	75.045	Haplochromis_burtoni
ENSFDAG00000009234	PARN	100	94.976	ENSHGLG00000010886	PARN	100	94.976	Heterocephalus_glaber_female
ENSFDAG00000009234	PARN	100	94.976	ENSHGLG00100014659	PARN	100	94.976	Heterocephalus_glaber_male
ENSFDAG00000009234	PARN	86	69.908	ENSHCOG00000008683	parn	91	73.157	Hippocampus_comes
ENSFDAG00000009234	PARN	100	58.560	ENSIPUG00000012401	parn	84	63.214	Ictalurus_punctatus
ENSFDAG00000009234	PARN	100	90.424	ENSSTOG00000007519	PARN	100	90.424	Ictidomys_tridecemlineatus
ENSFDAG00000009234	PARN	100	86.364	ENSJJAG00000023049	Parn	100	86.364	Jaculus_jaculus
ENSFDAG00000009234	PARN	92	72.973	ENSKMAG00000009462	parn	84	72.973	Kryptolebias_marmoratus
ENSFDAG00000009234	PARN	92	72.101	ENSLBEG00000009167	parn	90	72.101	Labrus_bergylta
ENSFDAG00000009234	PARN	79	78.373	ENSLACG00000004207	PARN	100	77.358	Latimeria_chalumnae
ENSFDAG00000009234	PARN	92	75.130	ENSLOCG00000000715	parn	85	74.871	Lepisosteus_oculatus
ENSFDAG00000009234	PARN	100	89.498	ENSLAFG00000015036	PARN	100	89.498	Loxodonta_africana
ENSFDAG00000009234	PARN	100	85.312	ENSMFAG00000044852	PARN	100	98.305	Macaca_fascicularis
ENSFDAG00000009234	PARN	100	90.297	ENSMMUG00000018849	PARN	100	98.305	Macaca_mulatta
ENSFDAG00000009234	PARN	100	90.454	ENSMNEG00000045108	PARN	100	98.305	Macaca_nemestrina
ENSFDAG00000009234	PARN	100	90.297	ENSMLEG00000031743	PARN	100	98.305	Mandrillus_leucophaeus
ENSFDAG00000009234	PARN	90	74.132	ENSMAMG00000006939	parn	82	74.132	Mastacembelus_armatus
ENSFDAG00000009234	PARN	90	74.739	ENSMZEG00005013590	parn	93	74.457	Maylandia_zebra
ENSFDAG00000009234	PARN	95	80.131	ENSMGAG00000001004	PARN	95	80.131	Meleagris_gallopavo
ENSFDAG00000009234	PARN	100	79.475	ENSMAUG00000008025	Parn	100	79.475	Mesocricetus_auratus
ENSFDAG00000009234	PARN	100	90.909	ENSMICG00000016053	PARN	100	96.610	Microcebus_murinus
ENSFDAG00000009234	PARN	78	90.688	ENSMOCG00000022211	Parn	100	90.688	Microtus_ochrogaster
ENSFDAG00000009234	PARN	88	72.613	ENSMMOG00000011333	parn	91	72.613	Mola_mola
ENSFDAG00000009234	PARN	78	92.137	ENSMODG00000004915	PARN	99	92.137	Monodelphis_domestica
ENSFDAG00000009234	PARN	85	76.536	ENSMALG00000019426	parn	91	78.212	Monopterus_albus
ENSFDAG00000009234	PARN	100	84.326	MGP_CAROLIEiJ_G0020466	Parn	100	84.326	Mus_caroli
ENSFDAG00000009234	PARN	100	84.483	ENSMUSG00000022685	Parn	100	91.463	Mus_musculus
ENSFDAG00000009234	PARN	100	84.169	MGP_PahariEiJ_G0016172	Parn	100	84.169	Mus_pahari
ENSFDAG00000009234	PARN	100	84.483	MGP_SPRETEiJ_G0021361	Parn	100	84.483	Mus_spretus
ENSFDAG00000009234	PARN	100	89.342	ENSMPUG00000014464	PARN	100	89.342	Mustela_putorius_furo
ENSFDAG00000009234	PARN	79	89.676	ENSMLUG00000005414	PARN	100	91.498	Myotis_lucifugus
ENSFDAG00000009234	PARN	85	75.940	ENSNBRG00000006805	parn	93	74.364	Neolamprologus_brichardi
ENSFDAG00000009234	PARN	100	90.454	ENSNLEG00000010241	PARN	100	98.305	Nomascus_leucogenys
ENSFDAG00000009234	PARN	99	60.063	ENSMEUG00000008178	-	100	60.063	Notamacropus_eugenii
ENSFDAG00000009234	PARN	99	83.994	ENSOPRG00000012187	PARN	100	83.994	Ochotona_princeps
ENSFDAG00000009234	PARN	100	85.805	ENSODEG00000001617	PARN	100	85.805	Octodon_degus
ENSFDAG00000009234	PARN	100	69.372	ENSONIG00000000151	parn	100	69.372	Oreochromis_niloticus
ENSFDAG00000009234	PARN	59	79.365	ENSOANG00000020155	-	97	79.211	Ornithorhynchus_anatinus
ENSFDAG00000009234	PARN	99	89.873	ENSOCUG00000000322	PARN	99	89.873	Oryctolagus_cuniculus
ENSFDAG00000009234	PARN	91	72.125	ENSORLG00020010313	parn	85	72.125	Oryzias_latipes_hni
ENSFDAG00000009234	PARN	91	71.603	ENSORLG00015000300	parn	85	71.603	Oryzias_latipes_hsok
ENSFDAG00000009234	PARN	92	71.307	ENSOMEG00000019555	parn	97	66.968	Oryzias_melastigma
ENSFDAG00000009234	PARN	77	92.323	ENSOGAG00000014626	PARN	100	92.323	Otolemur_garnettii
ENSFDAG00000009234	PARN	77	94.939	ENSOARG00000007574	PARN	100	94.939	Ovis_aries
ENSFDAG00000009234	PARN	100	90.610	ENSPPAG00000031438	PARN	100	98.305	Pan_paniscus
ENSFDAG00000009234	PARN	100	89.969	ENSPPRG00000018583	PARN	100	94.915	Panthera_pardus
ENSFDAG00000009234	PARN	100	89.969	ENSPTIG00000012135	PARN	100	94.915	Panthera_tigris_altaica
ENSFDAG00000009234	PARN	100	90.297	ENSPTRG00000007792	PARN	100	98.305	Pan_troglodytes
ENSFDAG00000009234	PARN	100	87.324	ENSPANG00000020099	PARN	100	98.305	Papio_anubis
ENSFDAG00000009234	PARN	99	63.651	ENSPKIG00000022807	parn	89	68.157	Paramormyrops_kingsleyae
ENSFDAG00000009234	PARN	97	82.637	ENSPSIG00000014804	PARN	100	81.282	Pelodiscus_sinensis
ENSFDAG00000009234	PARN	81	76.654	ENSPMGG00000014431	parn	74	75.093	Periophthalmus_magnuspinnatus
ENSFDAG00000009234	PARN	100	83.099	ENSPEMG00000018439	Parn	100	83.099	Peromyscus_maniculatus_bairdii
ENSFDAG00000009234	PARN	83	65.896	ENSPMAG00000003956	parn	98	67.052	Petromyzon_marinus
ENSFDAG00000009234	PARN	67	85.106	ENSPCIG00000001259	PARN	91	89.831	Phascolarctos_cinereus
ENSFDAG00000009234	PARN	90	73.621	ENSPFOG00000012823	parn	84	72.318	Poecilia_formosa
ENSFDAG00000009234	PARN	90	73.793	ENSPLAG00000006395	parn	84	72.491	Poecilia_latipinna
ENSFDAG00000009234	PARN	90	73.793	ENSPMEG00000007711	parn	84	72.973	Poecilia_mexicana
ENSFDAG00000009234	PARN	90	73.621	ENSPREG00000000147	parn	84	72.804	Poecilia_reticulata
ENSFDAG00000009234	PARN	100	89.860	ENSPPYG00000007123	PARN	100	89.860	Pongo_abelii
ENSFDAG00000009234	PARN	95	78.347	ENSPCAG00000001741	PARN	100	78.347	Procavia_capensis
ENSFDAG00000009234	PARN	100	88.245	ENSPCOG00000019292	PARN	100	96.610	Propithecus_coquereli
ENSFDAG00000009234	PARN	99	85.737	ENSPVAG00000002547	PARN	100	85.737	Pteropus_vampyrus
ENSFDAG00000009234	PARN	90	74.739	ENSPNYG00000006835	parn	93	72.152	Pundamilia_nyererei
ENSFDAG00000009234	PARN	82	71.845	ENSPNAG00000018905	parn	83	74.950	Pygocentrus_nattereri
ENSFDAG00000009234	PARN	100	81.555	ENSRNOG00000002912	Parn	97	88.776	Rattus_norvegicus
ENSFDAG00000009234	PARN	51	30.211	ENSRNOG00000023140	Pnldc1	89	30.211	Rattus_norvegicus
ENSFDAG00000009234	PARN	52	86.186	ENSRBIG00000018726	PARN	100	86.186	Rhinopithecus_bieti
ENSFDAG00000009234	PARN	52	86.186	ENSRROG00000011162	-	100	86.186	Rhinopithecus_roxellana
ENSFDAG00000009234	PARN	100	88.263	ENSSBOG00000034726	PARN	100	98.305	Saimiri_boliviensis_boliviensis
ENSFDAG00000009234	PARN	65	91.607	ENSSHAG00000008493	PARN	93	91.607	Sarcophilus_harrisii
ENSFDAG00000009234	PARN	96	70.333	ENSSFOG00015014165	parn	88	76.083	Scleropages_formosus
ENSFDAG00000009234	PARN	100	61.852	ENSSMAG00000000685	parn	100	62.191	Scophthalmus_maximus
ENSFDAG00000009234	PARN	90	73.529	ENSSDUG00000014555	parn	82	73.529	Seriola_dumerili
ENSFDAG00000009234	PARN	81	90.553	ENSSARG00000014339	PARN	88	90.553	Sorex_araneus
ENSFDAG00000009234	PARN	100	82.915	ENSSPUG00000007719	PARN	100	82.915	Sphenodon_punctatus
ENSFDAG00000009234	PARN	90	75.087	ENSSPAG00000007095	parn	89	72.313	Stegastes_partitus
ENSFDAG00000009234	PARN	100	89.185	ENSSSCG00000007878	PARN	89	89.185	Sus_scrofa
ENSFDAG00000009234	PARN	99	81.329	ENSTGUG00000004971	PARN	99	81.329	Taeniopygia_guttata
ENSFDAG00000009234	PARN	56	32.033	ENSTGUG00000011418	PNLDC1	68	32.033	Taeniopygia_guttata
ENSFDAG00000009234	PARN	100	67.597	ENSTNIG00000008252	parn	100	67.752	Tetraodon_nigroviridis
ENSFDAG00000009234	PARN	91	76.166	ENSTBEG00000010407	PARN	100	76.166	Tupaia_belangeri
ENSFDAG00000009234	PARN	99	85.420	ENSTTRG00000002843	PARN	100	85.420	Tursiops_truncatus
ENSFDAG00000009234	PARN	69	81.567	ENSUAMG00000008283	PARN	90	81.567	Ursus_americanus
ENSFDAG00000009234	PARN	100	89.342	ENSUMAG00000004527	PARN	100	89.342	Ursus_maritimus
ENSFDAG00000009234	PARN	96	86.971	ENSVPAG00000008968	PARN	100	86.971	Vicugna_pacos
ENSFDAG00000009234	PARN	100	89.498	ENSVVUG00000019509	PARN	100	89.498	Vulpes_vulpes
ENSFDAG00000009234	PARN	100	73.083	ENSXETG00000010994	parn	100	81.559	Xenopus_tropicalis
ENSFDAG00000009234	PARN	90	69.775	ENSXCOG00000015990	parn	96	69.205	Xiphophorus_couchianus
ENSFDAG00000009234	PARN	92	72.927	ENSXMAG00000014783	parn	84	72.927	Xiphophorus_maculatus