EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000009383 (Gene tree)
Gene ID: 104851951
Gene Symbol: GTSF1
Alias: FAM112B|FLJ32942
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 18998 bases
Position: chrKN124398.1:1774057-1793054
Accession: 104851951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000019084	zf-U11-48K	PF05253.12	8.7e-21	1	2
ENSFDAP00000019084	zf-U11-48K	PF05253.12	8.7e-21	2	2
ENSFDAP00000019087	zf-U11-48K	PF05253.12	1.2e-20	1	2
ENSFDAP00000019087	zf-U11-48K	PF05253.12	1.2e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000028122	GTSF1-201	1930	XM_010609386	ENSFDAP00000019084	167 (aa)	XP_010607688	UPI0005400354
ENSFDAT00000028123	GTSF1-202	564	-	ENSFDAP00000019087	187 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000009383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000009383's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000009383	GTSF1	69	33.333	ENSFDAG00000019555	-	79	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000009383	GTSF1	100	87.425	ENSG00000170627	GTSF1	100	87.425	Homo_sapiens
ENSFDAG00000009383	GTSF1	88	46.980	ENSAPOG00000022724	-	95	46.980	Acanthochromis_polyacanthus
ENSFDAG00000009383	GTSF1	97	91.975	ENSAMEG00000000939	GTSF1	96	91.975	Ailuropoda_melanoleuca
ENSFDAG00000009383	GTSF1	88	45.638	ENSAOCG00000022214	-	72	43.949	Amphiprion_ocellaris
ENSFDAG00000009383	GTSF1	69	61.538	ENSAPLG00000004814	GTSF1	86	61.538	Anas_platyrhynchos
ENSFDAG00000009383	GTSF1	69	51.724	ENSACAG00000029590	-	95	51.724	Anolis_carolinensis
ENSFDAG00000009383	GTSF1	97	62.346	ENSACAG00000014260	-	96	61.212	Anolis_carolinensis
ENSFDAG00000009383	GTSF1	100	88.024	ENSANAG00000024529	GTSF1	100	88.024	Aotus_nancymaae
ENSFDAG00000009383	GTSF1	100	89.820	ENSBTAG00000018085	GTSF1	100	89.820	Bos_taurus
ENSFDAG00000009383	GTSF1	100	87.425	ENSCJAG00000018968	-	100	87.425	Callithrix_jacchus
ENSFDAG00000009383	GTSF1	100	82.635	ENSCJAG00000039915	-	96	80.000	Callithrix_jacchus
ENSFDAG00000009383	GTSF1	100	91.617	ENSCAFG00000006465	-	100	91.617	Canis_familiaris
ENSFDAG00000009383	GTSF1	100	91.617	ENSCAFG00020020373	-	94	90.854	Canis_lupus_dingo
ENSFDAG00000009383	GTSF1	98	88.957	ENSCHIG00000012215	-	95	88.957	Capra_hircus
ENSFDAG00000009383	GTSF1	100	73.054	ENSTSYG00000035266	-	100	73.054	Carlito_syrichta
ENSFDAG00000009383	GTSF1	99	89.157	ENSTSYG00000004679	-	100	89.157	Carlito_syrichta
ENSFDAG00000009383	GTSF1	100	92.814	ENSCPOG00000008743	GTSF1	100	92.814	Cavia_porcellus
ENSFDAG00000009383	GTSF1	96	65.217	ENSCCAG00000032808	GTSF1	100	65.217	Cebus_capucinus
ENSFDAG00000009383	GTSF1	100	87.425	ENSCATG00000036328	GTSF1	100	87.425	Cercocebus_atys
ENSFDAG00000009383	GTSF1	100	92.814	ENSCLAG00000012811	GTSF1	100	92.814	Chinchilla_lanigera
ENSFDAG00000009383	GTSF1	94	87.261	ENSCSAG00000005394	GTSF1	99	87.261	Chlorocebus_sabaeus
ENSFDAG00000009383	GTSF1	100	89.820	ENSCHOG00000001659	GTSF1	100	89.820	Choloepus_hoffmanni
ENSFDAG00000009383	GTSF1	99	68.675	ENSCPBG00000005134	-	80	63.441	Chrysemys_picta_bellii
ENSFDAG00000009383	GTSF1	95	60.625	ENSCPBG00000024905	-	86	60.625	Chrysemys_picta_bellii
ENSFDAG00000009383	GTSF1	100	86.228	ENSCANG00000033118	GTSF1	100	86.228	Colobus_angolensis_palliatus
ENSFDAG00000009383	GTSF1	100	82.635	ENSCANG00000031776	-	100	82.635	Colobus_angolensis_palliatus
ENSFDAG00000009383	GTSF1	100	92.814	ENSCGRG00001013814	Gtsf1	100	92.814	Cricetulus_griseus_chok1gshd
ENSFDAG00000009383	GTSF1	100	92.814	ENSCGRG00000007733	Gtsf1	100	92.814	Cricetulus_griseus_crigri
ENSFDAG00000009383	GTSF1	94	89.172	ENSDNOG00000001438	-	90	89.172	Dasypus_novemcinctus
ENSFDAG00000009383	GTSF1	100	92.814	ENSDORG00000003228	Gtsf1	100	92.814	Dipodomys_ordii
ENSFDAG00000009383	GTSF1	100	89.820	ENSETEG00000009310	GTSF1	100	89.820	Echinops_telfairi
ENSFDAG00000009383	GTSF1	100	91.018	ENSEASG00005010260	GTSF1	95	88.136	Equus_asinus_asinus
ENSFDAG00000009383	GTSF1	100	91.018	ENSECAG00000013618	GTSF1	100	91.018	Equus_caballus
ENSFDAG00000009383	GTSF1	100	92.814	ENSEEUG00000005185	GTSF1	100	92.814	Erinaceus_europaeus
ENSFDAG00000009383	GTSF1	100	64.671	ENSFCAG00000023672	-	95	63.277	Felis_catus
ENSFDAG00000009383	GTSF1	100	91.617	ENSFCAG00000010156	-	100	91.617	Felis_catus
ENSFDAG00000009383	GTSF1	75	53.175	ENSFALG00000007613	-	100	53.175	Ficedula_albicollis
ENSFDAG00000009383	GTSF1	92	51.948	ENSGALG00000001109	GTSF1	95	51.948	Gallus_gallus
ENSFDAG00000009383	GTSF1	88	49.660	ENSGACG00000010783	-	80	49.660	Gasterosteus_aculeatus
ENSFDAG00000009383	GTSF1	99	61.677	ENSGAGG00000011062	GTSF1	86	61.677	Gopherus_agassizii
ENSFDAG00000009383	GTSF1	66	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
ENSFDAG00000009383	GTSF1	62	52.830	ENSGAGG00000016342	-	99	52.830	Gopherus_agassizii
ENSFDAG00000009383	GTSF1	100	87.425	ENSGGOG00000016063	GTSF1	100	87.425	Gorilla_gorilla
ENSFDAG00000009383	GTSF1	100	90.909	ENSHGLG00000002436	GTSF1	100	90.909	Heterocephalus_glaber_female
ENSFDAG00000009383	GTSF1	100	90.909	ENSHGLG00100017301	GTSF1	100	90.909	Heterocephalus_glaber_male
ENSFDAG00000009383	GTSF1	91	48.077	ENSIPUG00000002483	-	82	48.077	Ictalurus_punctatus
ENSFDAG00000009383	GTSF1	100	93.413	ENSSTOG00000025170	GTSF1	100	93.413	Ictidomys_tridecemlineatus
ENSFDAG00000009383	GTSF1	100	82.635	ENSJJAG00000017442	-	100	82.635	Jaculus_jaculus
ENSFDAG00000009383	GTSF1	100	88.623	ENSJJAG00000003323	-	100	88.623	Jaculus_jaculus
ENSFDAG00000009383	GTSF1	88	48.980	ENSKMAG00000006038	-	80	48.980	Kryptolebias_marmoratus
ENSFDAG00000009383	GTSF1	95	60.127	ENSLACG00000008870	GTSF1	95	54.098	Latimeria_chalumnae
ENSFDAG00000009383	GTSF1	97	91.975	ENSLAFG00000016318	GTSF1	97	91.975	Loxodonta_africana
ENSFDAG00000009383	GTSF1	100	87.425	ENSMFAG00000041178	GTSF1	100	87.425	Macaca_fascicularis
ENSFDAG00000009383	GTSF1	100	87.425	ENSMMUG00000003758	GTSF1	100	87.425	Macaca_mulatta
ENSFDAG00000009383	GTSF1	100	87.425	ENSMNEG00000036779	GTSF1	100	87.425	Macaca_nemestrina
ENSFDAG00000009383	GTSF1	100	86.826	ENSMLEG00000028375	GTSF1	100	86.826	Mandrillus_leucophaeus
ENSFDAG00000009383	GTSF1	69	58.974	ENSMGAG00000000685	GTSF1	83	58.974	Meleagris_gallopavo
ENSFDAG00000009383	GTSF1	100	71.257	ENSMAUG00000018746	Gtsf1	99	71.257	Mesocricetus_auratus
ENSFDAG00000009383	GTSF1	100	91.617	ENSMICG00000008444	-	100	91.617	Microcebus_murinus
ENSFDAG00000009383	GTSF1	100	92.814	ENSMOCG00000018889	Gtsf1	100	92.814	Microtus_ochrogaster
ENSFDAG00000009383	GTSF1	100	83.832	ENSMODG00000019422	GTSF1	100	83.832	Monodelphis_domestica
ENSFDAG00000009383	GTSF1	100	93.413	MGP_CAROLIEiJ_G0020379	Gtsf1	100	94.488	Mus_caroli
ENSFDAG00000009383	GTSF1	100	93.413	ENSMUSG00000022487	Gtsf1	100	94.488	Mus_musculus
ENSFDAG00000009383	GTSF1	100	94.012	MGP_PahariEiJ_G0020378	Gtsf1	100	95.276	Mus_pahari
ENSFDAG00000009383	GTSF1	100	93.413	MGP_SPRETEiJ_G0021272	Gtsf1	100	94.488	Mus_spretus
ENSFDAG00000009383	GTSF1	98	92.073	ENSMPUG00000005669	-	98	92.073	Mustela_putorius_furo
ENSFDAG00000009383	GTSF1	100	90.419	ENSMPUG00000019323	-	100	90.419	Mustela_putorius_furo
ENSFDAG00000009383	GTSF1	100	83.832	ENSMPUG00000019140	-	100	83.832	Mustela_putorius_furo
ENSFDAG00000009383	GTSF1	100	88.024	ENSMLUG00000026557	-	100	88.024	Myotis_lucifugus
ENSFDAG00000009383	GTSF1	100	91.018	ENSMLUG00000012961	-	100	91.018	Myotis_lucifugus
ENSFDAG00000009383	GTSF1	100	92.216	ENSNGAG00000014213	Gtsf1	100	92.216	Nannospalax_galili
ENSFDAG00000009383	GTSF1	100	86.826	ENSNLEG00000017635	GTSF1	100	86.826	Nomascus_leucogenys
ENSFDAG00000009383	GTSF1	100	73.653	ENSMEUG00000016206	GTSF1	100	73.653	Notamacropus_eugenii
ENSFDAG00000009383	GTSF1	100	66.467	ENSOPRG00000017277	GTSF1	100	66.467	Ochotona_princeps
ENSFDAG00000009383	GTSF1	100	91.617	ENSODEG00000014220	GTSF1	100	91.617	Octodon_degus
ENSFDAG00000009383	GTSF1	99	68.072	ENSOANG00000011386	GTSF1	99	68.072	Ornithorhynchus_anatinus
ENSFDAG00000009383	GTSF1	100	91.018	ENSOCUG00000024495	GTSF1	100	91.018	Oryctolagus_cuniculus
ENSFDAG00000009383	GTSF1	76	44.186	ENSORLG00015005017	-	70	51.327	Oryzias_latipes_hsok
ENSFDAG00000009383	GTSF1	95	89.308	ENSOGAG00000017227	GTSF1	94	89.308	Otolemur_garnettii
ENSFDAG00000009383	GTSF1	100	90.419	ENSOARG00000016162	GTSF1	100	90.419	Ovis_aries
ENSFDAG00000009383	GTSF1	100	87.425	ENSPPAG00000028506	GTSF1	100	87.425	Pan_paniscus
ENSFDAG00000009383	GTSF1	100	83.234	ENSPPRG00000017612	-	96	80.791	Panthera_pardus
ENSFDAG00000009383	GTSF1	100	91.617	ENSPPRG00000004344	-	100	91.617	Panthera_pardus
ENSFDAG00000009383	GTSF1	100	91.617	ENSPTIG00000020415	-	100	91.617	Panthera_tigris_altaica
ENSFDAG00000009383	GTSF1	100	83.832	ENSPTIG00000010868	-	96	81.356	Panthera_tigris_altaica
ENSFDAG00000009383	GTSF1	100	87.425	ENSPTRG00000005041	GTSF1	100	87.425	Pan_troglodytes
ENSFDAG00000009383	GTSF1	100	87.425	ENSPANG00000020579	GTSF1	100	87.425	Papio_anubis
ENSFDAG00000009383	GTSF1	83	46.309	ENSPSIG00000009839	-	93	46.309	Pelodiscus_sinensis
ENSFDAG00000009383	GTSF1	98	67.879	ENSPSIG00000009968	GTSF1	84	66.279	Pelodiscus_sinensis
ENSFDAG00000009383	GTSF1	100	92.814	ENSPEMG00000009595	Gtsf1	100	92.814	Peromyscus_maniculatus_bairdii
ENSFDAG00000009383	GTSF1	100	77.844	ENSPCIG00000006731	GTSF1	100	77.844	Phascolarctos_cinereus
ENSFDAG00000009383	GTSF1	100	87.425	ENSPPYG00000004605	GTSF1	100	87.425	Pongo_abelii
ENSFDAG00000009383	GTSF1	97	79.630	ENSPCOG00000015201	-	99	76.543	Propithecus_coquereli
ENSFDAG00000009383	GTSF1	100	91.018	ENSPCOG00000016907	-	100	91.018	Propithecus_coquereli
ENSFDAG00000009383	GTSF1	100	92.216	ENSPVAG00000000333	GTSF1	100	92.216	Pteropus_vampyrus
ENSFDAG00000009383	GTSF1	90	49.342	ENSPNAG00000005737	-	82	49.342	Pygocentrus_nattereri
ENSFDAG00000009383	GTSF1	100	93.413	ENSRNOG00000036831	Gtsf1	98	88.108	Rattus_norvegicus
ENSFDAG00000009383	GTSF1	100	86.826	ENSRBIG00000043438	-	100	86.826	Rhinopithecus_bieti
ENSFDAG00000009383	GTSF1	100	81.437	ENSRBIG00000039916	-	99	76.757	Rhinopithecus_bieti
ENSFDAG00000009383	GTSF1	100	87.425	ENSRROG00000008137	GTSF1	100	87.425	Rhinopithecus_roxellana
ENSFDAG00000009383	GTSF1	100	88.024	ENSSBOG00000029460	GTSF1	100	88.024	Saimiri_boliviensis_boliviensis
ENSFDAG00000009383	GTSF1	100	83.832	ENSSHAG00000011633	GTSF1	100	83.832	Sarcophilus_harrisii
ENSFDAG00000009383	GTSF1	78	90.000	ENSSARG00000004928	GTSF1	78	90.000	Sorex_araneus
ENSFDAG00000009383	GTSF1	98	48.235	ENSSPUG00000010064	GTSF1	93	69.091	Sphenodon_punctatus
ENSFDAG00000009383	GTSF1	100	91.018	ENSSSCG00000026333	GTSF1	100	91.018	Sus_scrofa
ENSFDAG00000009383	GTSF1	76	57.031	ENSTGUG00000002008	-	100	57.031	Taeniopygia_guttata
ENSFDAG00000009383	GTSF1	96	90.062	ENSTBEG00000006154	GTSF1	100	90.062	Tupaia_belangeri
ENSFDAG00000009383	GTSF1	100	89.820	ENSTTRG00000004470	GTSF1	100	89.820	Tursiops_truncatus
ENSFDAG00000009383	GTSF1	100	92.216	ENSUAMG00000021669	GTSF1	94	91.463	Ursus_americanus
ENSFDAG00000009383	GTSF1	100	92.216	ENSUMAG00000011279	GTSF1	100	92.216	Ursus_maritimus
ENSFDAG00000009383	GTSF1	100	91.018	ENSVPAG00000007016	GTSF1	100	91.018	Vicugna_pacos
ENSFDAG00000009383	GTSF1	100	91.617	ENSVVUG00000023687	-	89	89.831	Vulpes_vulpes
ENSFDAG00000009383	GTSF1	96	63.975	ENSXETG00000033546	gtsf1	71	63.975	Xenopus_tropicalis