EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000009532 (Gene tree)
Gene ID: 104863808
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 36548 bases
Position: chrKN122182.1:2416462-2453009
Accession: 104863808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000018878	Suf	PF05843.14	4.2e-09	1	1
ENSFDAP00000018878	S1	PF00575.23	2.5e-73	1	4
ENSFDAP00000018878	S1	PF00575.23	2.5e-73	2	4
ENSFDAP00000018878	S1	PF00575.23	2.5e-73	3	4
ENSFDAP00000018878	S1	PF00575.23	2.5e-73	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000013220	PDCD11-201	5610	XM_010626450	ENSFDAP00000018878	1869 (aa)	XP_010624752	-

Gene Model

Click here to download ENSFDAG00000009532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000009532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000009532	PDCD11	100	82.021	ENSG00000148843	PDCD11	100	82.074	Homo_sapiens
ENSFDAG00000009532	PDCD11	99	43.966	ENSAPOG00000015629	pdcd11	99	44.072	Acanthochromis_polyacanthus
ENSFDAG00000009532	PDCD11	99	80.064	ENSAMEG00000017935	PDCD11	99	80.117	Ailuropoda_melanoleuca
ENSFDAG00000009532	PDCD11	99	44.172	ENSAOCG00000015287	pdcd11	99	44.066	Amphiprion_ocellaris
ENSFDAG00000009532	PDCD11	53	42.142	ENSAPEG00000020240	pdcd11	96	42.142	Amphiprion_percula
ENSFDAG00000009532	PDCD11	99	43.326	ENSATEG00000021043	pdcd11	99	43.767	Anabas_testudineus
ENSFDAG00000009532	PDCD11	99	54.719	ENSAPLG00000010301	PDCD11	99	54.825	Anas_platyrhynchos
ENSFDAG00000009532	PDCD11	99	54.162	ENSACAG00000004796	PDCD11	99	54.162	Anolis_carolinensis
ENSFDAG00000009532	PDCD11	99	81.823	ENSANAG00000034576	PDCD11	99	81.983	Aotus_nancymaae
ENSFDAG00000009532	PDCD11	92	65.101	ENSACLG00000018236	pdcd11	99	58.807	Astatotilapia_calliptera
ENSFDAG00000009532	PDCD11	99	39.694	ENSAMXG00000005458	pdcd11	100	39.694	Astyanax_mexicanus
ENSFDAG00000009532	PDCD11	100	78.780	ENSBTAG00000009715	PDCD11	100	78.780	Bos_taurus
ENSFDAG00000009532	PDCD11	99	81.290	ENSCJAG00000018257	PDCD11	99	81.770	Callithrix_jacchus
ENSFDAG00000009532	PDCD11	99	80.638	ENSCAFG00000010411	PDCD11	100	80.691	Canis_familiaris
ENSFDAG00000009532	PDCD11	100	80.477	ENSCAFG00020010369	PDCD11	100	80.716	Canis_lupus_dingo
ENSFDAG00000009532	PDCD11	99	78.231	ENSCHIG00000025218	PDCD11	100	78.284	Capra_hircus
ENSFDAG00000009532	PDCD11	98	76.659	ENSTSYG00000033423	PDCD11	100	76.659	Carlito_syrichta
ENSFDAG00000009532	PDCD11	91	76.963	ENSCAPG00000005386	PDCD11	99	77.487	Cavia_aperea
ENSFDAG00000009532	PDCD11	100	83.191	ENSCPOG00000010957	PDCD11	99	84.615	Cavia_porcellus
ENSFDAG00000009532	PDCD11	99	81.716	ENSCCAG00000018950	PDCD11	99	81.876	Cebus_capucinus
ENSFDAG00000009532	PDCD11	100	82.465	ENSCATG00000044331	PDCD11	100	82.519	Cercocebus_atys
ENSFDAG00000009532	PDCD11	100	84.992	ENSCLAG00000001029	PDCD11	100	84.992	Chinchilla_lanigera
ENSFDAG00000009532	PDCD11	100	82.660	ENSCSAG00000005346	PDCD11	100	82.713	Chlorocebus_sabaeus
ENSFDAG00000009532	PDCD11	80	96.899	ENSCHOG00000004796	PDCD11	89	96.899	Choloepus_hoffmanni
ENSFDAG00000009532	PDCD11	91	73.295	ENSCPBG00000024487	PDCD11	99	73.011	Chrysemys_picta_bellii
ENSFDAG00000009532	PDCD11	100	82.660	ENSCANG00000043300	PDCD11	100	82.713	Colobus_angolensis_palliatus
ENSFDAG00000009532	PDCD11	100	78.393	ENSCGRG00001006458	Pdcd11	100	78.712	Cricetulus_griseus_chok1gshd
ENSFDAG00000009532	PDCD11	100	78.340	ENSCGRG00000003583	Pdcd11	100	78.659	Cricetulus_griseus_crigri
ENSFDAG00000009532	PDCD11	97	43.068	ENSCSEG00000010739	pdcd11	99	43.231	Cynoglossus_semilaevis
ENSFDAG00000009532	PDCD11	89	63.450	ENSCVAG00000018903	pdcd11	99	49.688	Cyprinodon_variegatus
ENSFDAG00000009532	PDCD11	99	42.979	ENSDARG00000052480	pdcd11	99	43.092	Danio_rerio
ENSFDAG00000009532	PDCD11	100	78.950	ENSDNOG00000013838	PDCD11	100	79.056	Dasypus_novemcinctus
ENSFDAG00000009532	PDCD11	100	79.808	ENSDORG00000010420	Pdcd11	100	80.053	Dipodomys_ordii
ENSFDAG00000009532	PDCD11	56	40.575	FBgn0039182	CG5728	70	40.067	Drosophila_melanogaster
ENSFDAG00000009532	PDCD11	95	69.265	ENSETEG00000000813	PDCD11	100	69.265	Echinops_telfairi
ENSFDAG00000009532	PDCD11	67	52.303	ENSEBUG00000002358	-	93	52.303	Eptatretus_burgeri
ENSFDAG00000009532	PDCD11	96	81.323	ENSEASG00005015159	PDCD11	100	81.990	Equus_asinus_asinus
ENSFDAG00000009532	PDCD11	100	81.871	ENSECAG00000020507	PDCD11	100	81.978	Equus_caballus
ENSFDAG00000009532	PDCD11	98	85.000	ENSEEUG00000009245	PDCD11	91	85.000	Erinaceus_europaeus
ENSFDAG00000009532	PDCD11	99	44.368	ENSELUG00000004211	pdcd11	99	44.551	Esox_lucius
ENSFDAG00000009532	PDCD11	99	80.882	ENSFCAG00000002384	PDCD11	99	81.253	Felis_catus
ENSFDAG00000009532	PDCD11	99	54.768	ENSFALG00000008775	PDCD11	99	55.035	Ficedula_albicollis
ENSFDAG00000009532	PDCD11	88	67.110	ENSFHEG00000022997	pdcd11	97	63.889	Fundulus_heteroclitus
ENSFDAG00000009532	PDCD11	93	44.634	ENSGMOG00000004186	pdcd11	94	44.634	Gadus_morhua
ENSFDAG00000009532	PDCD11	76	53.554	ENSGALG00000008265	PDCD11	99	52.804	Gallus_gallus
ENSFDAG00000009532	PDCD11	99	42.707	ENSGAFG00000012806	pdcd11	99	42.520	Gambusia_affinis
ENSFDAG00000009532	PDCD11	99	43.750	ENSGACG00000018233	pdcd11	96	58.947	Gasterosteus_aculeatus
ENSFDAG00000009532	PDCD11	96	58.194	ENSGAGG00000024314	PDCD11	99	58.082	Gopherus_agassizii
ENSFDAG00000009532	PDCD11	100	81.809	ENSGGOG00000011621	PDCD11	100	81.862	Gorilla_gorilla
ENSFDAG00000009532	PDCD11	100	88.806	ENSHGLG00000001462	PDCD11	100	88.913	Heterocephalus_glaber_female
ENSFDAG00000009532	PDCD11	100	87.900	ENSHGLG00100018779	PDCD11	100	88.006	Heterocephalus_glaber_male
ENSFDAG00000009532	PDCD11	99	41.980	ENSHCOG00000016006	pdcd11	99	42.102	Hippocampus_comes
ENSFDAG00000009532	PDCD11	62	39.026	ENSIPUG00000015102	pdcd11	99	40.215	Ictalurus_punctatus
ENSFDAG00000009532	PDCD11	100	82.685	ENSSTOG00000014553	PDCD11	100	82.845	Ictidomys_tridecemlineatus
ENSFDAG00000009532	PDCD11	100	80.479	ENSJJAG00000015523	Pdcd11	100	80.957	Jaculus_jaculus
ENSFDAG00000009532	PDCD11	99	47.764	ENSLOCG00000011818	pdcd11	99	48.509	Lepisosteus_oculatus
ENSFDAG00000009532	PDCD11	100	79.200	ENSLAFG00000008398	PDCD11	100	79.253	Loxodonta_africana
ENSFDAG00000009532	PDCD11	100	82.713	ENSMFAG00000044058	PDCD11	100	82.766	Macaca_fascicularis
ENSFDAG00000009532	PDCD11	100	82.713	ENSMMUG00000007058	PDCD11	100	82.766	Macaca_mulatta
ENSFDAG00000009532	PDCD11	100	82.713	ENSMNEG00000040726	PDCD11	99	82.713	Macaca_nemestrina
ENSFDAG00000009532	PDCD11	100	81.881	ENSMLEG00000040978	PDCD11	100	81.881	Mandrillus_leucophaeus
ENSFDAG00000009532	PDCD11	99	43.849	ENSMAMG00000009572	pdcd11	99	44.002	Mastacembelus_armatus
ENSFDAG00000009532	PDCD11	99	54.478	ENSMGAG00000010482	PDCD11	99	54.637	Meleagris_gallopavo
ENSFDAG00000009532	PDCD11	100	76.800	ENSMAUG00000014924	Pdcd11	100	77.333	Mesocricetus_auratus
ENSFDAG00000009532	PDCD11	100	82.409	ENSMICG00000012421	PDCD11	100	82.409	Microcebus_murinus
ENSFDAG00000009532	PDCD11	100	77.772	ENSMOCG00000021792	Pdcd11	100	77.878	Microtus_ochrogaster
ENSFDAG00000009532	PDCD11	99	39.174	ENSMMOG00000007572	pdcd11	99	39.121	Mola_mola
ENSFDAG00000009532	PDCD11	99	60.720	ENSMODG00000011077	PDCD11	99	61.091	Monodelphis_domestica
ENSFDAG00000009532	PDCD11	87	56.196	ENSMALG00000003859	pdcd11	98	46.316	Monopterus_albus
ENSFDAG00000009532	PDCD11	100	76.580	MGP_CAROLIEiJ_G0023050	Pdcd11	100	76.845	Mus_caroli
ENSFDAG00000009532	PDCD11	100	76.605	ENSMUSG00000025047	Pdcd11	100	76.817	Mus_musculus
ENSFDAG00000009532	PDCD11	100	78.067	MGP_PahariEiJ_G0014540	Pdcd11	100	78.120	Mus_pahari
ENSFDAG00000009532	PDCD11	100	76.474	MGP_SPRETEiJ_G0023971	Pdcd11	100	76.686	Mus_spretus
ENSFDAG00000009532	PDCD11	99	80.585	ENSMPUG00000016829	PDCD11	100	81.170	Mustela_putorius_furo
ENSFDAG00000009532	PDCD11	100	80.647	ENSMLUG00000004997	PDCD11	100	81.336	Myotis_lucifugus
ENSFDAG00000009532	PDCD11	100	80.691	ENSNGAG00000018143	Pdcd11	100	80.745	Nannospalax_galili
ENSFDAG00000009532	PDCD11	85	54.985	ENSNBRG00000021596	pdcd11	99	55.241	Neolamprologus_brichardi
ENSFDAG00000009532	PDCD11	100	78.670	ENSNLEG00000026700	PDCD11	100	78.670	Nomascus_leucogenys
ENSFDAG00000009532	PDCD11	71	80.349	ENSMEUG00000013719	-	71	80.349	Notamacropus_eugenii
ENSFDAG00000009532	PDCD11	97	81.089	ENSOPRG00000010593	PDCD11	97	81.089	Ochotona_princeps
ENSFDAG00000009532	PDCD11	100	82.496	ENSODEG00000008079	PDCD11	99	82.655	Octodon_degus
ENSFDAG00000009532	PDCD11	99	42.781	ENSONIG00000018835	pdcd11	99	43.977	Oreochromis_niloticus
ENSFDAG00000009532	PDCD11	99	58.908	ENSOANG00000001636	-	99	58.908	Ornithorhynchus_anatinus
ENSFDAG00000009532	PDCD11	100	81.837	ENSOCUG00000006312	PDCD11	100	81.837	Oryctolagus_cuniculus
ENSFDAG00000009532	PDCD11	99	43.153	ENSORLG00020003642	pdcd11	99	43.107	Oryzias_latipes_hni
ENSFDAG00000009532	PDCD11	99	43.160	ENSORLG00015001618	pdcd11	99	43.008	Oryzias_latipes_hsok
ENSFDAG00000009532	PDCD11	73	43.871	ENSOMEG00000010904	pdcd11	98	43.961	Oryzias_melastigma
ENSFDAG00000009532	PDCD11	100	80.393	ENSOGAG00000008683	PDCD11	100	80.765	Otolemur_garnettii
ENSFDAG00000009532	PDCD11	99	78.302	ENSOARG00000003719	PDCD11	100	78.355	Ovis_aries
ENSFDAG00000009532	PDCD11	100	81.640	ENSPPAG00000024593	PDCD11	100	81.707	Pan_paniscus
ENSFDAG00000009532	PDCD11	99	80.988	ENSPPRG00000015133	PDCD11	99	81.413	Panthera_pardus
ENSFDAG00000009532	PDCD11	99	81.041	ENSPTIG00000011433	PDCD11	99	81.466	Panthera_tigris_altaica
ENSFDAG00000009532	PDCD11	100	82.021	ENSPTRG00000002911	PDCD11	100	82.074	Pan_troglodytes
ENSFDAG00000009532	PDCD11	100	82.606	ENSPANG00000020959	PDCD11	100	82.660	Papio_anubis
ENSFDAG00000009532	PDCD11	99	44.772	ENSPKIG00000000973	pdcd11	99	44.599	Paramormyrops_kingsleyae
ENSFDAG00000009532	PDCD11	77	56.474	ENSPSIG00000005102	PDCD11	95	56.474	Pelodiscus_sinensis
ENSFDAG00000009532	PDCD11	63	62.418	ENSPMGG00000007289	pdcd11	93	48.085	Periophthalmus_magnuspinnatus
ENSFDAG00000009532	PDCD11	100	78.044	ENSPEMG00000010315	Pdcd11	100	78.469	Peromyscus_maniculatus_bairdii
ENSFDAG00000009532	PDCD11	99	41.592	ENSPMAG00000003098	pdcd11	99	41.592	Petromyzon_marinus
ENSFDAG00000009532	PDCD11	100	64.675	ENSPCIG00000001118	PDCD11	100	64.675	Phascolarctos_cinereus
ENSFDAG00000009532	PDCD11	99	43.717	ENSPFOG00000006012	pdcd11	99	44.036	Poecilia_formosa
ENSFDAG00000009532	PDCD11	96	49.180	ENSPLAG00000014494	pdcd11	99	49.329	Poecilia_latipinna
ENSFDAG00000009532	PDCD11	91	54.352	ENSPMEG00000018177	pdcd11	98	54.352	Poecilia_mexicana
ENSFDAG00000009532	PDCD11	99	43.717	ENSPREG00000000475	pdcd11	99	43.876	Poecilia_reticulata
ENSFDAG00000009532	PDCD11	100	79.453	ENSPPYG00000002621	PDCD11	100	79.523	Pongo_abelii
ENSFDAG00000009532	PDCD11	81	73.960	ENSPCAG00000011663	PDCD11	74	73.960	Procavia_capensis
ENSFDAG00000009532	PDCD11	100	75.573	ENSPCOG00000023327	PDCD11	100	75.573	Propithecus_coquereli
ENSFDAG00000009532	PDCD11	100	79.702	ENSPVAG00000004176	PDCD11	100	80.021	Pteropus_vampyrus
ENSFDAG00000009532	PDCD11	99	43.032	ENSPNYG00000003979	pdcd11	99	43.923	Pundamilia_nyererei
ENSFDAG00000009532	PDCD11	95	45.210	ENSPNAG00000017225	pdcd11	99	45.297	Pygocentrus_nattereri
ENSFDAG00000009532	PDCD11	100	77.229	ENSRNOG00000020304	Pdcd11	99	77.601	Rattus_norvegicus
ENSFDAG00000009532	PDCD11	100	82.553	ENSRBIG00000011889	PDCD11	100	82.606	Rhinopithecus_bieti
ENSFDAG00000009532	PDCD11	100	82.606	ENSRROG00000030483	PDCD11	100	82.660	Rhinopithecus_roxellana
ENSFDAG00000009532	PDCD11	99	81.086	ENSSBOG00000030308	PDCD11	99	81.086	Saimiri_boliviensis_boliviensis
ENSFDAG00000009532	PDCD11	99	63.737	ENSSHAG00000018258	PDCD11	99	64.028	Sarcophilus_harrisii
ENSFDAG00000009532	PDCD11	99	45.096	ENSSFOG00015003881	pdcd11	99	44.989	Scleropages_formosus
ENSFDAG00000009532	PDCD11	99	43.879	ENSSMAG00000006612	pdcd11	99	44.197	Scophthalmus_maximus
ENSFDAG00000009532	PDCD11	95	47.669	ENSSDUG00000021302	pdcd11	99	49.020	Seriola_dumerili
ENSFDAG00000009532	PDCD11	80	85.714	ENSSARG00000002540	PDCD11	74	85.714	Sorex_araneus
ENSFDAG00000009532	PDCD11	97	41.735	ENSSPAG00000017558	pdcd11	100	42.071	Stegastes_partitus
ENSFDAG00000009532	PDCD11	100	79.576	ENSSSCG00000010599	PDCD11	100	79.967	Sus_scrofa
ENSFDAG00000009532	PDCD11	70	40.319	ENSTRUG00000014291	pdcd11	99	40.273	Takifugu_rubripes
ENSFDAG00000009532	PDCD11	99	42.789	ENSTNIG00000012085	pdcd11	99	42.812	Tetraodon_nigroviridis
ENSFDAG00000009532	PDCD11	100	76.580	ENSTBEG00000001893	PDCD11	100	76.792	Tupaia_belangeri
ENSFDAG00000009532	PDCD11	99	75.331	ENSTTRG00000003356	PDCD11	99	75.451	Tursiops_truncatus
ENSFDAG00000009532	PDCD11	99	80.138	ENSUAMG00000018015	PDCD11	100	80.404	Ursus_americanus
ENSFDAG00000009532	PDCD11	100	78.466	ENSUMAG00000023567	PDCD11	100	78.677	Ursus_maritimus
ENSFDAG00000009532	PDCD11	75	81.343	ENSVPAG00000007405	PDCD11	83	81.343	Vicugna_pacos
ENSFDAG00000009532	PDCD11	99	80.426	ENSVVUG00000004457	PDCD11	100	80.904	Vulpes_vulpes
ENSFDAG00000009532	PDCD11	99	48.299	ENSXETG00000009482	pdcd11	99	48.562	Xenopus_tropicalis
ENSFDAG00000009532	PDCD11	99	38.703	ENSXCOG00000012420	pdcd11	99	38.650	Xiphophorus_couchianus
ENSFDAG00000009532	PDCD11	99	44.267	ENSXMAG00000004638	pdcd11	99	44.533	Xiphophorus_maculatus