EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000009560 (Gene tree)
Gene ID: 104848063
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 20254 bases
Position: chrKN123755.1:4204992-4225245
Accession: 104848063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000018818	PRP21_like_P	PF12230.8	6.8e-52	1	1
ENSFDAP00000018818	Surp	PF01805.20	5.4e-46	1	2
ENSFDAP00000018818	Surp	PF01805.20	5.4e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000013277	SF3A1-201	2884	XM_010603782	ENSFDAP00000018818	793 (aa)	XP_010602084	A0A091CVH8

Gene Model

Click here to download ENSFDAG00000009560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000009560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000009560	SF3A1	100	98.865	ENSG00000099995	SF3A1	100	98.865	Homo_sapiens
ENSFDAG00000009560	SF3A1	100	83.145	ENSAPOG00000020465	sf3a1	99	85.032	Acanthochromis_polyacanthus
ENSFDAG00000009560	SF3A1	100	98.365	ENSAMEG00000007737	SF3A1	100	98.365	Ailuropoda_melanoleuca
ENSFDAG00000009560	SF3A1	100	84.403	ENSACIG00000020672	sf3a1	98	85.938	Amphilophus_citrinellus
ENSFDAG00000009560	SF3A1	100	82.875	ENSAOCG00000003060	sf3a1	99	85.290	Amphiprion_ocellaris
ENSFDAG00000009560	SF3A1	100	83.000	ENSAPEG00000010735	sf3a1	99	85.419	Amphiprion_percula
ENSFDAG00000009560	SF3A1	96	85.807	ENSATEG00000021201	sf3a1	98	85.290	Anabas_testudineus
ENSFDAG00000009560	SF3A1	95	93.791	ENSAPLG00000009057	SF3A1	99	92.903	Anas_platyrhynchos
ENSFDAG00000009560	SF3A1	100	85.837	ENSACAG00000009415	SF3A1	100	87.069	Anolis_carolinensis
ENSFDAG00000009560	SF3A1	100	98.613	ENSANAG00000032045	SF3A1	100	98.613	Aotus_nancymaae
ENSFDAG00000009560	SF3A1	100	84.230	ENSACLG00000012622	sf3a1	99	85.788	Astatotilapia_calliptera
ENSFDAG00000009560	SF3A1	99	83.312	ENSAMXG00000005382	sf3a1	98	84.864	Astyanax_mexicanus
ENSFDAG00000009560	SF3A1	100	98.991	ENSBTAG00000003390	SF3A1	100	98.991	Bos_taurus
ENSFDAG00000009560	SF3A1	84	43.268	WBGene00004188	prp-21	94	43.321	Caenorhabditis_elegans
ENSFDAG00000009560	SF3A1	100	98.739	ENSCJAG00000010370	SF3A1	100	98.739	Callithrix_jacchus
ENSFDAG00000009560	SF3A1	100	98.739	ENSCAFG00000012559	SF3A1	100	98.739	Canis_familiaris
ENSFDAG00000009560	SF3A1	100	98.739	ENSCAFG00020000838	SF3A1	100	98.739	Canis_lupus_dingo
ENSFDAG00000009560	SF3A1	100	98.865	ENSCHIG00000018642	SF3A1	100	98.865	Capra_hircus
ENSFDAG00000009560	SF3A1	100	99.369	ENSTSYG00000004739	SF3A1	100	99.369	Carlito_syrichta
ENSFDAG00000009560	SF3A1	94	81.442	ENSCAPG00000015414	SF3A1	98	81.442	Cavia_aperea
ENSFDAG00000009560	SF3A1	100	99.117	ENSCPOG00000014589	SF3A1	100	99.117	Cavia_porcellus
ENSFDAG00000009560	SF3A1	100	98.613	ENSCCAG00000032006	SF3A1	100	98.613	Cebus_capucinus
ENSFDAG00000009560	SF3A1	100	99.117	ENSCATG00000029241	SF3A1	100	99.117	Cercocebus_atys
ENSFDAG00000009560	SF3A1	100	99.117	ENSCLAG00000006508	SF3A1	100	99.117	Chinchilla_lanigera
ENSFDAG00000009560	SF3A1	100	98.991	ENSCSAG00000009470	SF3A1	100	98.991	Chlorocebus_sabaeus
ENSFDAG00000009560	SF3A1	61	99.083	ENSCHOG00000005201	SF3A1	69	99.083	Choloepus_hoffmanni
ENSFDAG00000009560	SF3A1	100	90.806	ENSCPBG00000007595	SF3A1	100	90.932	Chrysemys_picta_bellii
ENSFDAG00000009560	SF3A1	94	52.249	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSFDAG00000009560	SF3A1	96	51.484	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSFDAG00000009560	SF3A1	100	98.991	ENSCANG00000033564	SF3A1	100	98.991	Colobus_angolensis_palliatus
ENSFDAG00000009560	SF3A1	100	98.613	ENSCGRG00001008933	Sf3a1	100	98.613	Cricetulus_griseus_chok1gshd
ENSFDAG00000009560	SF3A1	100	98.613	ENSCGRG00000006127	Sf3a1	100	98.613	Cricetulus_griseus_crigri
ENSFDAG00000009560	SF3A1	99	81.980	ENSCSEG00000010792	sf3a1	98	83.095	Cynoglossus_semilaevis
ENSFDAG00000009560	SF3A1	100	83.019	ENSCVAG00000004560	sf3a1	98	84.245	Cyprinodon_variegatus
ENSFDAG00000009560	SF3A1	100	82.412	ENSDARG00000041887	sf3a1	97	84.746	Danio_rerio
ENSFDAG00000009560	SF3A1	100	98.491	ENSDNOG00000010629	SF3A1	100	98.491	Dasypus_novemcinctus
ENSFDAG00000009560	SF3A1	100	98.991	ENSDORG00000005613	Sf3a1	100	98.991	Dipodomys_ordii
ENSFDAG00000009560	SF3A1	79	61.869	FBgn0266917	Sf3a1	85	60.000	Drosophila_melanogaster
ENSFDAG00000009560	SF3A1	84	96.707	ENSETEG00000017194	SF3A1	100	94.444	Echinops_telfairi
ENSFDAG00000009560	SF3A1	100	65.176	ENSEBUG00000001285	sf3a1	96	67.203	Eptatretus_burgeri
ENSFDAG00000009560	SF3A1	100	99.117	ENSEASG00005010254	SF3A1	100	99.117	Equus_asinus_asinus
ENSFDAG00000009560	SF3A1	100	99.117	ENSECAG00000023962	SF3A1	100	99.117	Equus_caballus
ENSFDAG00000009560	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSFDAG00000009560	SF3A1	100	82.206	ENSELUG00000022578	sf3a1	97	83.333	Esox_lucius
ENSFDAG00000009560	SF3A1	100	98.865	ENSFCAG00000011932	SF3A1	100	98.865	Felis_catus
ENSFDAG00000009560	SF3A1	95	92.725	ENSFALG00000006944	SF3A1	100	91.436	Ficedula_albicollis
ENSFDAG00000009560	SF3A1	100	84.151	ENSFHEG00000010866	sf3a1	98	85.417	Fundulus_heteroclitus
ENSFDAG00000009560	SF3A1	100	81.234	ENSGMOG00000016024	sf3a1	97	81.453	Gadus_morhua
ENSFDAG00000009560	SF3A1	95	93.783	ENSGALG00000007937	SF3A1	100	91.940	Gallus_gallus
ENSFDAG00000009560	SF3A1	100	83.019	ENSGAFG00000009111	sf3a1	97	84.706	Gambusia_affinis
ENSFDAG00000009560	SF3A1	100	82.494	ENSGACG00000011893	sf3a1	97	83.639	Gasterosteus_aculeatus
ENSFDAG00000009560	SF3A1	96	90.933	ENSGAGG00000000762	SF3A1	99	91.064	Gopherus_agassizii
ENSFDAG00000009560	SF3A1	100	98.865	ENSGGOG00000012631	SF3A1	100	98.865	Gorilla_gorilla
ENSFDAG00000009560	SF3A1	100	84.230	ENSHBUG00000015795	sf3a1	99	85.788	Haplochromis_burtoni
ENSFDAG00000009560	SF3A1	100	99.622	ENSHGLG00000007907	SF3A1	100	99.622	Heterocephalus_glaber_female
ENSFDAG00000009560	SF3A1	100	99.622	ENSHGLG00100013799	SF3A1	100	99.622	Heterocephalus_glaber_male
ENSFDAG00000009560	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.774	Hippocampus_comes
ENSFDAG00000009560	SF3A1	96	82.552	ENSIPUG00000002470	sf3a1	98	82.812	Ictalurus_punctatus
ENSFDAG00000009560	SF3A1	100	99.243	ENSSTOG00000013892	SF3A1	100	99.243	Ictidomys_tridecemlineatus
ENSFDAG00000009560	SF3A1	100	98.992	ENSJJAG00000022566	Sf3a1	100	98.992	Jaculus_jaculus
ENSFDAG00000009560	SF3A1	100	82.767	ENSKMAG00000002400	sf3a1	98	84.766	Kryptolebias_marmoratus
ENSFDAG00000009560	SF3A1	100	82.516	ENSLBEG00000022974	sf3a1	99	83.097	Labrus_bergylta
ENSFDAG00000009560	SF3A1	100	86.826	ENSLACG00000003565	SF3A1	97	88.151	Latimeria_chalumnae
ENSFDAG00000009560	SF3A1	100	85.088	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSFDAG00000009560	SF3A1	100	98.487	ENSLAFG00000000448	SF3A1	100	98.487	Loxodonta_africana
ENSFDAG00000009560	SF3A1	98	62.293	ENSLAFG00000026032	-	97	62.339	Loxodonta_africana
ENSFDAG00000009560	SF3A1	100	98.865	ENSMFAG00000031979	SF3A1	100	98.865	Macaca_fascicularis
ENSFDAG00000009560	SF3A1	100	98.865	ENSMMUG00000005547	SF3A1	100	98.865	Macaca_mulatta
ENSFDAG00000009560	SF3A1	100	98.739	ENSMNEG00000037229	SF3A1	100	98.739	Macaca_nemestrina
ENSFDAG00000009560	SF3A1	100	98.991	ENSMLEG00000041908	SF3A1	100	98.991	Mandrillus_leucophaeus
ENSFDAG00000009560	SF3A1	97	85.640	ENSMAMG00000006460	sf3a1	97	85.770	Mastacembelus_armatus
ENSFDAG00000009560	SF3A1	100	84.230	ENSMZEG00005009633	sf3a1	99	85.788	Maylandia_zebra
ENSFDAG00000009560	SF3A1	95	93.783	ENSMGAG00000001330	SF3A1	99	92.894	Meleagris_gallopavo
ENSFDAG00000009560	SF3A1	92	94.945	ENSMAUG00000020317	Sf3a1	94	94.945	Mesocricetus_auratus
ENSFDAG00000009560	SF3A1	100	98.739	ENSMICG00000010038	SF3A1	100	98.739	Microcebus_murinus
ENSFDAG00000009560	SF3A1	100	98.487	ENSMOCG00000008438	Sf3a1	100	98.487	Microtus_ochrogaster
ENSFDAG00000009560	SF3A1	100	81.761	ENSMMOG00000015588	sf3a1	97	82.943	Mola_mola
ENSFDAG00000009560	SF3A1	100	97.604	ENSMODG00000009270	SF3A1	100	97.604	Monodelphis_domestica
ENSFDAG00000009560	SF3A1	100	84.635	ENSMALG00000000148	sf3a1	99	86.240	Monopterus_albus
ENSFDAG00000009560	SF3A1	100	98.108	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.108	Mus_caroli
ENSFDAG00000009560	SF3A1	100	98.108	ENSMUSG00000002129	Sf3a1	100	98.108	Mus_musculus
ENSFDAG00000009560	SF3A1	100	98.108	MGP_PahariEiJ_G0016862	Sf3a1	100	98.108	Mus_pahari
ENSFDAG00000009560	SF3A1	100	98.108	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.108	Mus_spretus
ENSFDAG00000009560	SF3A1	100	98.739	ENSMPUG00000013144	SF3A1	100	98.739	Mustela_putorius_furo
ENSFDAG00000009560	SF3A1	100	98.991	ENSMLUG00000002139	SF3A1	100	98.991	Myotis_lucifugus
ENSFDAG00000009560	SF3A1	100	98.739	ENSNGAG00000016977	Sf3a1	100	98.739	Nannospalax_galili
ENSFDAG00000009560	SF3A1	100	83.645	ENSNBRG00000016642	sf3a1	96	86.693	Neolamprologus_brichardi
ENSFDAG00000009560	SF3A1	100	98.991	ENSNLEG00000003686	SF3A1	100	98.991	Nomascus_leucogenys
ENSFDAG00000009560	SF3A1	96	87.895	ENSMEUG00000008741	SF3A1	100	87.895	Notamacropus_eugenii
ENSFDAG00000009560	SF3A1	100	98.361	ENSOPRG00000016636	SF3A1	100	98.361	Ochotona_princeps
ENSFDAG00000009560	SF3A1	100	99.369	ENSODEG00000002571	SF3A1	100	99.369	Octodon_degus
ENSFDAG00000009560	SF3A1	100	84.250	ENSONIG00000010848	sf3a1	99	85.161	Oreochromis_niloticus
ENSFDAG00000009560	SF3A1	100	98.739	ENSOCUG00000007633	SF3A1	100	98.739	Oryctolagus_cuniculus
ENSFDAG00000009560	SF3A1	96	81.890	ENSORLG00000013050	sf3a1	98	83.693	Oryzias_latipes
ENSFDAG00000009560	SF3A1	96	82.677	ENSORLG00020003236	sf3a1	94	83.827	Oryzias_latipes_hni
ENSFDAG00000009560	SF3A1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSFDAG00000009560	SF3A1	100	82.642	ENSOMEG00000013362	sf3a1	99	83.484	Oryzias_melastigma
ENSFDAG00000009560	SF3A1	100	98.991	ENSOGAG00000012931	SF3A1	100	98.991	Otolemur_garnettii
ENSFDAG00000009560	SF3A1	100	97.100	ENSOARG00000006849	SF3A1	100	97.100	Ovis_aries
ENSFDAG00000009560	SF3A1	100	97.856	ENSPPAG00000041790	SF3A1	100	97.856	Pan_paniscus
ENSFDAG00000009560	SF3A1	100	98.865	ENSPPRG00000004391	SF3A1	100	98.865	Panthera_pardus
ENSFDAG00000009560	SF3A1	97	98.964	ENSPTIG00000000844	SF3A1	100	98.964	Panthera_tigris_altaica
ENSFDAG00000009560	SF3A1	100	98.865	ENSPTRG00000014240	SF3A1	100	98.865	Pan_troglodytes
ENSFDAG00000009560	SF3A1	100	98.991	ENSPANG00000020772	SF3A1	100	98.991	Papio_anubis
ENSFDAG00000009560	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSFDAG00000009560	SF3A1	96	84.293	ENSPMGG00000023096	sf3a1	100	84.031	Periophthalmus_magnuspinnatus
ENSFDAG00000009560	SF3A1	100	98.613	ENSPEMG00000009494	Sf3a1	100	98.613	Peromyscus_maniculatus_bairdii
ENSFDAG00000009560	SF3A1	69	77.858	ENSPMAG00000007139	-	90	79.511	Petromyzon_marinus
ENSFDAG00000009560	SF3A1	100	97.352	ENSPCIG00000022692	SF3A1	100	97.352	Phascolarctos_cinereus
ENSFDAG00000009560	SF3A1	100	75.126	ENSPFOG00000016768	sf3a1	93	78.776	Poecilia_formosa
ENSFDAG00000009560	SF3A1	100	83.417	ENSPLAG00000017268	sf3a1	97	84.967	Poecilia_latipinna
ENSFDAG00000009560	SF3A1	84	85.843	ENSPMEG00000019811	sf3a1	98	85.090	Poecilia_mexicana
ENSFDAG00000009560	SF3A1	100	83.543	ENSPREG00000010347	sf3a1	97	85.359	Poecilia_reticulata
ENSFDAG00000009560	SF3A1	100	98.991	ENSPPYG00000011707	SF3A1	100	98.991	Pongo_abelii
ENSFDAG00000009560	SF3A1	57	99.057	ENSPCAG00000003266	SF3A1	57	99.057	Procavia_capensis
ENSFDAG00000009560	SF3A1	100	98.739	ENSPCOG00000026630	SF3A1	100	98.739	Propithecus_coquereli
ENSFDAG00000009560	SF3A1	100	94.451	ENSPVAG00000017719	SF3A1	94	97.987	Pteropus_vampyrus
ENSFDAG00000009560	SF3A1	100	84.230	ENSPNYG00000018706	sf3a1	99	85.788	Pundamilia_nyererei
ENSFDAG00000009560	SF3A1	97	83.825	ENSPNAG00000003721	sf3a1	99	84.596	Pygocentrus_nattereri
ENSFDAG00000009560	SF3A1	100	98.613	ENSRNOG00000005218	Sf3a1	100	98.613	Rattus_norvegicus
ENSFDAG00000009560	SF3A1	100	99.117	ENSRBIG00000032167	SF3A1	100	99.117	Rhinopithecus_bieti
ENSFDAG00000009560	SF3A1	100	99.117	ENSRROG00000044908	SF3A1	100	99.117	Rhinopithecus_roxellana
ENSFDAG00000009560	SF3A1	97	94.703	ENSSBOG00000021960	SF3A1	100	98.818	Saimiri_boliviensis_boliviensis
ENSFDAG00000009560	SF3A1	97	94.955	ENSSHAG00000003666	SF3A1	98	95.084	Sarcophilus_harrisii
ENSFDAG00000009560	SF3A1	100	83.500	ENSSFOG00015004579	sf3a1	99	85.256	Scleropages_formosus
ENSFDAG00000009560	SF3A1	100	81.509	ENSSMAG00000004275	sf3a1	97	82.745	Scophthalmus_maximus
ENSFDAG00000009560	SF3A1	100	83.774	ENSSDUG00000022219	sf3a1	99	85.032	Seriola_dumerili
ENSFDAG00000009560	SF3A1	100	83.774	ENSSLDG00000012642	sf3a1	99	85.032	Seriola_lalandi_dorsalis
ENSFDAG00000009560	SF3A1	97	95.466	ENSSARG00000005960	SF3A1	100	95.466	Sorex_araneus
ENSFDAG00000009560	SF3A1	96	92.098	ENSSPUG00000018863	SF3A1	100	91.667	Sphenodon_punctatus
ENSFDAG00000009560	SF3A1	100	84.403	ENSSPAG00000011856	sf3a1	99	85.032	Stegastes_partitus
ENSFDAG00000009560	SF3A1	100	98.865	ENSSSCG00000010002	SF3A1	100	98.865	Sus_scrofa
ENSFDAG00000009560	SF3A1	95	93.668	ENSTGUG00000010547	SF3A1	99	93.126	Taeniopygia_guttata
ENSFDAG00000009560	SF3A1	100	81.509	ENSTRUG00000006118	sf3a1	97	82.222	Takifugu_rubripes
ENSFDAG00000009560	SF3A1	64	81.041	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSFDAG00000009560	SF3A1	100	91.425	ENSTBEG00000012771	SF3A1	100	91.425	Tupaia_belangeri
ENSFDAG00000009560	SF3A1	100	98.615	ENSTTRG00000001535	SF3A1	100	98.615	Tursiops_truncatus
ENSFDAG00000009560	SF3A1	99	97.713	ENSUAMG00000006750	SF3A1	99	97.713	Ursus_americanus
ENSFDAG00000009560	SF3A1	99	97.832	ENSUMAG00000016665	SF3A1	99	97.832	Ursus_maritimus
ENSFDAG00000009560	SF3A1	100	98.739	ENSVVUG00000003075	SF3A1	100	98.739	Vulpes_vulpes
ENSFDAG00000009560	SF3A1	100	85.696	ENSXETG00000016144	sf3a1	100	85.320	Xenopus_tropicalis
ENSFDAG00000009560	SF3A1	100	82.767	ENSXCOG00000015653	sf3a1	97	84.444	Xiphophorus_couchianus
ENSFDAG00000009560	SF3A1	100	82.893	ENSXMAG00000002753	sf3a1	97	84.575	Xiphophorus_maculatus