EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000009818 (Gene tree)
Gene ID: 104850898
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 71651 bases
Position: chrKN124226.1:1236926-1308576
Accession: 104850898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000018493	ResIII	PF04851.15	2.5e-12	1	1
ENSFDAP00000018493	DEAD	PF00270.29	7.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000013545	SMARCA1-201	3060	XM_010608018	ENSFDAP00000018493	1019 (aa)	XP_010606320	-

Gene Model

Click here to download ENSFDAG00000009818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000009818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000009818	SMARCA1	56	42.241	ENSFDAG00000012431	CHD1L	64	42.586
ENSFDAG00000009818	SMARCA1	52	44.867	ENSFDAG00000010042	HELLS	65	44.867
ENSFDAG00000009818	SMARCA1	55	30.303	ENSFDAG00000019713	ERCC6L	51	30.303
ENSFDAG00000009818	SMARCA1	93	85.399	ENSFDAG00000021016	SMARCA5	96	85.124
ENSFDAG00000009818	SMARCA1	50	32.394	ENSFDAG00000020541	-	60	32.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000009818	SMARCA1	98	97.996	ENSG00000102038	SMARCA1	95	97.996	Homo_sapiens
ENSFDAG00000009818	SMARCA1	93	83.246	ENSAPOG00000016035	smarca5	96	83.592	Acanthochromis_polyacanthus
ENSFDAG00000009818	SMARCA1	97	96.771	ENSAMEG00000015218	SMARCA1	93	96.771	Ailuropoda_melanoleuca
ENSFDAG00000009818	SMARCA1	86	83.790	ENSACIG00000016982	smarca5	97	83.710	Amphilophus_citrinellus
ENSFDAG00000009818	SMARCA1	93	83.246	ENSAOCG00000015578	smarca5	93	82.209	Amphiprion_ocellaris
ENSFDAG00000009818	SMARCA1	93	83.246	ENSAPEG00000011117	smarca5	97	83.732	Amphiprion_percula
ENSFDAG00000009818	SMARCA1	96	81.587	ENSATEG00000012894	smarca5	95	81.587	Anabas_testudineus
ENSFDAG00000009818	SMARCA1	94	91.929	ENSAPLG00000013149	SMARCA1	97	91.641	Anas_platyrhynchos
ENSFDAG00000009818	SMARCA1	97	90.688	ENSACAG00000011376	SMARCA1	93	90.688	Anolis_carolinensis
ENSFDAG00000009818	SMARCA1	97	92.510	ENSANAG00000023098	SMARCA1	92	92.432	Aotus_nancymaae
ENSFDAG00000009818	SMARCA1	94	83.246	ENSACLG00000025356	smarca5	93	82.755	Astatotilapia_calliptera
ENSFDAG00000009818	SMARCA1	93	83.861	ENSAMXG00000005709	smarca5	92	83.697	Astyanax_mexicanus
ENSFDAG00000009818	SMARCA1	91	87.204	ENSAMXG00000011227	smarca1	99	87.915	Astyanax_mexicanus
ENSFDAG00000009818	SMARCA1	97	97.782	ENSBTAG00000002292	SMARCA1	94	97.782	Bos_taurus
ENSFDAG00000009818	SMARCA1	95	63.303	WBGene00002169	isw-1	95	63.303	Caenorhabditis_elegans
ENSFDAG00000009818	SMARCA1	97	97.578	ENSCJAG00000002868	SMARCA1	93	97.578	Callithrix_jacchus
ENSFDAG00000009818	SMARCA1	97	87.425	ENSCAFG00000018673	SMARCA1	97	86.532	Canis_familiaris
ENSFDAG00000009818	SMARCA1	97	96.771	ENSCAFG00020001751	SMARCA1	93	96.771	Canis_lupus_dingo
ENSFDAG00000009818	SMARCA1	98	97.896	ENSCHIG00000009837	SMARCA1	94	97.896	Capra_hircus
ENSFDAG00000009818	SMARCA1	97	97.674	ENSTSYG00000004240	SMARCA1	99	96.000	Carlito_syrichta
ENSFDAG00000009818	SMARCA1	98	98.597	ENSCPOG00000013601	SMARCA1	95	98.597	Cavia_porcellus
ENSFDAG00000009818	SMARCA1	97	94.534	ENSCCAG00000030817	SMARCA1	92	94.450	Cebus_capucinus
ENSFDAG00000009818	SMARCA1	97	97.982	ENSCATG00000015921	SMARCA1	95	96.894	Cercocebus_atys
ENSFDAG00000009818	SMARCA1	98	98.697	ENSCLAG00000002171	SMARCA1	95	98.697	Chinchilla_lanigera
ENSFDAG00000009818	SMARCA1	97	96.973	ENSCSAG00000008460	SMARCA1	93	96.973	Chlorocebus_sabaeus
ENSFDAG00000009818	SMARCA1	97	91.296	ENSCPBG00000001146	SMARCA1	92	91.296	Chrysemys_picta_bellii
ENSFDAG00000009818	SMARCA1	95	73.717	ENSCING00000004110	swi/snf	95	73.717	Ciona_intestinalis
ENSFDAG00000009818	SMARCA1	95	72.912	ENSCSAVG00000004620	-	100	73.516	Ciona_savignyi
ENSFDAG00000009818	SMARCA1	97	97.881	ENSCANG00000007183	SMARCA1	93	97.881	Colobus_angolensis_palliatus
ENSFDAG00000009818	SMARCA1	98	95.980	ENSCGRG00001010776	Smarca1	95	95.892	Cricetulus_griseus_chok1gshd
ENSFDAG00000009818	SMARCA1	98	95.783	ENSCGRG00000015301	Smarca1	99	95.783	Cricetulus_griseus_crigri
ENSFDAG00000009818	SMARCA1	95	82.834	ENSCSEG00000000328	smarca5	93	82.209	Cynoglossus_semilaevis
ENSFDAG00000009818	SMARCA1	94	82.618	ENSCVAG00000008668	smarca5	97	83.154	Cyprinodon_variegatus
ENSFDAG00000009818	SMARCA1	96	84.394	ENSDARG00000012776	smarca1	96	84.394	Danio_rerio
ENSFDAG00000009818	SMARCA1	94	82.432	ENSDARG00000052348	smarca5	93	82.293	Danio_rerio
ENSFDAG00000009818	SMARCA1	97	94.960	ENSDNOG00000004315	SMARCA1	95	94.960	Dasypus_novemcinctus
ENSFDAG00000009818	SMARCA1	98	95.992	ENSDORG00000009270	Smarca1	95	95.992	Dipodomys_ordii
ENSFDAG00000009818	SMARCA1	94	73.029	FBgn0011604	Iswi	94	73.061	Drosophila_melanogaster
ENSFDAG00000009818	SMARCA1	82	92.857	ENSETEG00000017426	SMARCA1	86	92.857	Echinops_telfairi
ENSFDAG00000009818	SMARCA1	93	81.144	ENSEBUG00000001239	smarca5	95	80.473	Eptatretus_burgeri
ENSFDAG00000009818	SMARCA1	97	93.110	ENSEASG00005008218	SMARCA1	97	93.313	Equus_asinus_asinus
ENSFDAG00000009818	SMARCA1	98	96.482	ENSECAG00000012106	SMARCA1	92	96.771	Equus_caballus
ENSFDAG00000009818	SMARCA1	80	96.358	ENSEEUG00000014927	SMARCA1	84	96.358	Erinaceus_europaeus
ENSFDAG00000009818	SMARCA1	96	85.423	ENSELUG00000010515	smarca1	97	85.085	Esox_lucius
ENSFDAG00000009818	SMARCA1	97	98.083	ENSFCAG00000018496	SMARCA1	93	98.083	Felis_catus
ENSFDAG00000009818	SMARCA1	91	91.459	ENSFALG00000000209	SMARCA1	98	91.558	Ficedula_albicollis
ENSFDAG00000009818	SMARCA1	94	83.246	ENSFHEG00000007687	smarca5	91	83.968	Fundulus_heteroclitus
ENSFDAG00000009818	SMARCA1	95	91.358	ENSGALG00000008431	SMARCA1	97	90.909	Gallus_gallus
ENSFDAG00000009818	SMARCA1	94	83.037	ENSGAFG00000017731	smarca5	93	82.311	Gambusia_affinis
ENSFDAG00000009818	SMARCA1	94	91.771	ENSGAGG00000023575	SMARCA1	98	91.771	Gopherus_agassizii
ENSFDAG00000009818	SMARCA1	73	96.000	ENSGGOG00000012841	-	97	96.000	Gorilla_gorilla
ENSFDAG00000009818	SMARCA1	98	98.397	ENSHGLG00000003080	SMARCA1	95	98.397	Heterocephalus_glaber_female
ENSFDAG00000009818	SMARCA1	97	98.174	ENSHGLG00100001102	SMARCA1	98	98.174	Heterocephalus_glaber_male
ENSFDAG00000009818	SMARCA1	93	83.281	ENSHCOG00000005458	smarca5	94	81.534	Hippocampus_comes
ENSFDAG00000009818	SMARCA1	94	82.586	ENSIPUG00000005229	SMARCA5	95	82.341	Ictalurus_punctatus
ENSFDAG00000009818	SMARCA1	96	85.584	ENSIPUG00000016905	Smarca1	98	86.111	Ictalurus_punctatus
ENSFDAG00000009818	SMARCA1	98	97.495	ENSSTOG00000014524	SMARCA1	95	97.495	Ictidomys_tridecemlineatus
ENSFDAG00000009818	SMARCA1	99	95.319	ENSJJAG00000002593	Smarca1	95	95.319	Jaculus_jaculus
ENSFDAG00000009818	SMARCA1	93	83.281	ENSKMAG00000003777	smarca5	93	82.515	Kryptolebias_marmoratus
ENSFDAG00000009818	SMARCA1	94	82.347	ENSLBEG00000018112	smarca5	93	82.311	Labrus_bergylta
ENSFDAG00000009818	SMARCA1	92	82.397	ENSLBEG00000013295	SMARCA1	100	83.313	Labrus_bergylta
ENSFDAG00000009818	SMARCA1	97	89.102	ENSLACG00000016697	SMARCA1	96	89.102	Latimeria_chalumnae
ENSFDAG00000009818	SMARCA1	95	88.751	ENSLOCG00000014591	smarca1	95	88.618	Lepisosteus_oculatus
ENSFDAG00000009818	SMARCA1	98	94.616	ENSLAFG00000000896	SMARCA1	100	94.616	Loxodonta_africana
ENSFDAG00000009818	SMARCA1	97	97.982	ENSMFAG00000002117	SMARCA1	98	96.503	Macaca_fascicularis
ENSFDAG00000009818	SMARCA1	97	97.982	ENSMMUG00000008818	SMARCA1	99	96.197	Macaca_mulatta
ENSFDAG00000009818	SMARCA1	97	97.982	ENSMNEG00000041768	SMARCA1	98	96.503	Macaca_nemestrina
ENSFDAG00000009818	SMARCA1	97	98.083	ENSMLEG00000043198	SMARCA1	93	98.083	Mandrillus_leucophaeus
ENSFDAG00000009818	SMARCA1	94	83.246	ENSMAMG00000014294	smarca5	93	82.618	Mastacembelus_armatus
ENSFDAG00000009818	SMARCA1	94	83.246	ENSMZEG00005009369	smarca5	93	82.755	Maylandia_zebra
ENSFDAG00000009818	SMARCA1	95	91.461	ENSMGAG00000007042	SMARCA1	97	91.185	Meleagris_gallopavo
ENSFDAG00000009818	SMARCA1	98	96.493	ENSMAUG00000008133	Smarca1	95	96.493	Mesocricetus_auratus
ENSFDAG00000009818	SMARCA1	97	98.184	ENSMICG00000015768	SMARCA1	93	98.184	Microcebus_murinus
ENSFDAG00000009818	SMARCA1	98	96.393	ENSMOCG00000009464	Smarca1	95	96.393	Microtus_ochrogaster
ENSFDAG00000009818	SMARCA1	94	80.582	ENSMMOG00000005547	smarca5	97	80.573	Mola_mola
ENSFDAG00000009818	SMARCA1	96	90.900	ENSMODG00000013187	-	95	89.960	Monodelphis_domestica
ENSFDAG00000009818	SMARCA1	95	81.781	ENSMALG00000002081	smarca5	99	80.139	Monopterus_albus
ENSFDAG00000009818	SMARCA1	98	95.015	MGP_CAROLIEiJ_G0033034	Smarca1	95	95.015	Mus_caroli
ENSFDAG00000009818	SMARCA1	98	95.115	ENSMUSG00000031099	Smarca1	95	95.115	Mus_musculus
ENSFDAG00000009818	SMARCA1	98	94.915	MGP_PahariEiJ_G0031579	Smarca1	95	94.915	Mus_pahari
ENSFDAG00000009818	SMARCA1	98	95.115	MGP_SPRETEiJ_G0034192	Smarca1	95	95.115	Mus_spretus
ENSFDAG00000009818	SMARCA1	97	97.881	ENSMPUG00000017423	SMARCA1	88	97.881	Mustela_putorius_furo
ENSFDAG00000009818	SMARCA1	98	94.478	ENSMLUG00000029614	SMARCA1	93	94.076	Myotis_lucifugus
ENSFDAG00000009818	SMARCA1	98	97.695	ENSNGAG00000006492	Smarca1	95	97.695	Nannospalax_galili
ENSFDAG00000009818	SMARCA1	94	83.351	ENSNBRG00000004463	smarca5	97	82.720	Neolamprologus_brichardi
ENSFDAG00000009818	SMARCA1	99	95.238	ENSNLEG00000015179	SMARCA1	99	95.238	Nomascus_leucogenys
ENSFDAG00000009818	SMARCA1	93	81.828	ENSMEUG00000008819	SMARCA1	100	81.828	Notamacropus_eugenii
ENSFDAG00000009818	SMARCA1	98	98.096	ENSODEG00000012163	SMARCA1	95	98.096	Octodon_degus
ENSFDAG00000009818	SMARCA1	94	83.351	ENSONIG00000009993	smarca5	93	82.857	Oreochromis_niloticus
ENSFDAG00000009818	SMARCA1	94	92.300	ENSOANG00000002862	SMARCA1	98	92.300	Ornithorhynchus_anatinus
ENSFDAG00000009818	SMARCA1	97	95.863	ENSOCUG00000001047	SMARCA1	93	95.863	Oryctolagus_cuniculus
ENSFDAG00000009818	SMARCA1	93	83.070	ENSORLG00000021998	smarca5	95	81.263	Oryzias_latipes
ENSFDAG00000009818	SMARCA1	93	83.176	ENSORLG00020017679	smarca5	95	81.263	Oryzias_latipes_hni
ENSFDAG00000009818	SMARCA1	93	83.070	ENSORLG00015017210	smarca5	95	81.162	Oryzias_latipes_hsok
ENSFDAG00000009818	SMARCA1	93	83.070	ENSOMEG00000000086	smarca5	95	81.162	Oryzias_melastigma
ENSFDAG00000009818	SMARCA1	98	97.796	ENSOGAG00000004399	SMARCA1	95	97.796	Otolemur_garnettii
ENSFDAG00000009818	SMARCA1	97	96.667	ENSOARG00000014638	SMARCA1	98	96.904	Ovis_aries
ENSFDAG00000009818	SMARCA1	97	97.982	ENSPPAG00000034647	SMARCA1	93	97.982	Pan_paniscus
ENSFDAG00000009818	SMARCA1	97	98.083	ENSPPRG00000008929	SMARCA1	93	98.083	Panthera_pardus
ENSFDAG00000009818	SMARCA1	97	96.181	ENSPTIG00000000915	SMARCA1	96	96.181	Panthera_tigris_altaica
ENSFDAG00000009818	SMARCA1	97	97.982	ENSPTRG00000049876	SMARCA1	95	96.894	Pan_troglodytes
ENSFDAG00000009818	SMARCA1	97	97.982	ENSPANG00000003871	SMARCA1	93	97.982	Papio_anubis
ENSFDAG00000009818	SMARCA1	96	85.321	ENSPKIG00000013411	smarca1	98	85.321	Paramormyrops_kingsleyae
ENSFDAG00000009818	SMARCA1	97	91.599	ENSPSIG00000010101	SMARCA1	98	91.599	Pelodiscus_sinensis
ENSFDAG00000009818	SMARCA1	98	97.194	ENSPEMG00000017503	Smarca1	95	97.194	Peromyscus_maniculatus_bairdii
ENSFDAG00000009818	SMARCA1	97	90.827	ENSPCIG00000015460	SMARCA1	97	90.827	Phascolarctos_cinereus
ENSFDAG00000009818	SMARCA1	93	83.281	ENSPFOG00000007649	smarca5	93	82.311	Poecilia_formosa
ENSFDAG00000009818	SMARCA1	93	83.281	ENSPLAG00000003363	smarca5	93	82.311	Poecilia_latipinna
ENSFDAG00000009818	SMARCA1	93	83.176	ENSPMEG00000019849	smarca5	94	81.911	Poecilia_mexicana
ENSFDAG00000009818	SMARCA1	93	83.176	ENSPREG00000023250	smarca5	94	81.911	Poecilia_reticulata
ENSFDAG00000009818	SMARCA1	97	93.946	ENSPPYG00000020703	SMARCA1	93	93.946	Pongo_abelii
ENSFDAG00000009818	SMARCA1	81	90.909	ENSPCOG00000020722	SMARCA1	94	90.909	Propithecus_coquereli
ENSFDAG00000009818	SMARCA1	93	96.939	ENSPVAG00000003805	SMARCA1	90	96.939	Pteropus_vampyrus
ENSFDAG00000009818	SMARCA1	58	83.562	ENSPNYG00000012299	smarca5	92	82.400	Pundamilia_nyererei
ENSFDAG00000009818	SMARCA1	97	95.257	ENSRNOG00000003762	Smarca1	93	95.257	Rattus_norvegicus
ENSFDAG00000009818	SMARCA1	97	97.881	ENSRROG00000034167	SMARCA1	93	97.881	Rhinopithecus_roxellana
ENSFDAG00000009818	SMARCA1	97	97.677	ENSSBOG00000020641	SMARCA1	98	97.110	Saimiri_boliviensis_boliviensis
ENSFDAG00000009818	SMARCA1	95	85.166	ENSSHAG00000013518	SMARCA1	97	85.166	Sarcophilus_harrisii
ENSFDAG00000009818	SMARCA1	95	87.333	ENSSFOG00015009043	smarca1	96	87.058	Scleropages_formosus
ENSFDAG00000009818	SMARCA1	95	82.195	ENSSFOG00015016794	smarca5	98	83.107	Scleropages_formosus
ENSFDAG00000009818	SMARCA1	94	82.188	ENSSMAG00000004801	smarca5	93	82.154	Scophthalmus_maximus
ENSFDAG00000009818	SMARCA1	94	82.723	ENSSDUG00000020690	smarca5	95	81.407	Seriola_dumerili
ENSFDAG00000009818	SMARCA1	94	82.723	ENSSLDG00000025190	smarca5	95	81.407	Seriola_lalandi_dorsalis
ENSFDAG00000009818	SMARCA1	90	90.217	ENSSARG00000000842	SMARCA1	92	90.217	Sorex_araneus
ENSFDAG00000009818	SMARCA1	98	90.161	ENSSPUG00000000590	SMARCA1	95	90.161	Sphenodon_punctatus
ENSFDAG00000009818	SMARCA1	94	82.932	ENSSPAG00000002894	smarca5	94	83.592	Stegastes_partitus
ENSFDAG00000009818	SMARCA1	97	96.573	ENSSSCG00000012649	SMARCA1	94	96.573	Sus_scrofa
ENSFDAG00000009818	SMARCA1	94	91.719	ENSTGUG00000003899	-	97	91.434	Taeniopygia_guttata
ENSFDAG00000009818	SMARCA1	94	83.037	ENSTRUG00000014094	smarca5	93	82.311	Takifugu_rubripes
ENSFDAG00000009818	SMARCA1	93	82.192	ENSTNIG00000017717	smarca5	92	81.288	Tetraodon_nigroviridis
ENSFDAG00000009818	SMARCA1	98	90.964	ENSTBEG00000014973	SMARCA1	100	90.964	Tupaia_belangeri
ENSFDAG00000009818	SMARCA1	97	94.949	ENSTTRG00000006168	SMARCA1	100	94.949	Tursiops_truncatus
ENSFDAG00000009818	SMARCA1	97	96.367	ENSUAMG00000020201	SMARCA1	93	96.367	Ursus_americanus
ENSFDAG00000009818	SMARCA1	97	93.509	ENSUMAG00000004073	SMARCA1	97	97.810	Ursus_maritimus
ENSFDAG00000009818	SMARCA1	82	99.365	ENSVPAG00000010492	-	86	99.365	Vicugna_pacos
ENSFDAG00000009818	SMARCA1	97	96.967	ENSVVUG00000008878	SMARCA1	100	97.113	Vulpes_vulpes
ENSFDAG00000009818	SMARCA1	95	88.958	ENSXETG00000001526	smarca1	98	88.810	Xenopus_tropicalis
ENSFDAG00000009818	SMARCA1	94	82.932	ENSXCOG00000011170	smarca5	96	82.209	Xiphophorus_couchianus
ENSFDAG00000009818	SMARCA1	94	82.932	ENSXMAG00000009678	smarca5	98	83.011	Xiphophorus_maculatus