EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000009903 (Gene tree)
Gene ID: 104868764
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 30560 bases
Position: chrKN120745.1:4019597-4050156
Accession: 104868764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000018378	PWI	PF01480.17	5.2e-30	1	1
ENSFDAP00000018375	PWI	PF01480.17	5.2e-30	1	1
ENSFDAP00000018371	PWI	PF01480.17	5.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000013678	SRRM1-203	3679	XM_010633677	ENSFDAP00000018371	915 (aa)	XP_010631979	UPI00053FB713
ENSFDAT00000013633	SRRM1-201	2697	-	ENSFDAP00000018378	898 (aa)	-	-
ENSFDAT00000013653	SRRM1-202	3636	XM_010633708	ENSFDAP00000018375	901 (aa)	XP_010632010	UPI000540343E

Gene Model

Click here to download ENSFDAG00000009903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000009903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000009903	SRRM1	100	97.345	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSFDAG00000009903	SRRM1	100	96.732	ENSAMEG00000010075	SRRM1	100	96.732	Ailuropoda_melanoleuca
ENSFDAG00000009903	SRRM1	60	63.973	ENSAPLG00000002066	SRRM1	59	76.335	Anas_platyrhynchos
ENSFDAG00000009903	SRRM1	100	96.841	ENSANAG00000035606	SRRM1	100	96.841	Aotus_nancymaae
ENSFDAG00000009903	SRRM1	100	96.892	ENSBTAG00000013772	SRRM1	100	96.892	Bos_taurus
ENSFDAG00000009903	SRRM1	100	96.078	ENSCJAG00000020822	SRRM1	100	96.102	Callithrix_jacchus
ENSFDAG00000009903	SRRM1	100	96.903	ENSCAFG00020020948	SRRM1	99	98.000	Canis_lupus_dingo
ENSFDAG00000009903	SRRM1	100	95.619	ENSCHIG00000014656	SRRM1	100	95.619	Capra_hircus
ENSFDAG00000009903	SRRM1	100	96.903	ENSTSYG00000006782	SRRM1	100	96.903	Carlito_syrichta
ENSFDAG00000009903	SRRM1	99	95.705	ENSCAPG00000011473	SRRM1	100	95.705	Cavia_aperea
ENSFDAG00000009903	SRRM1	100	96.612	ENSCPOG00000015594	SRRM1	100	96.612	Cavia_porcellus
ENSFDAG00000009903	SRRM1	100	96.681	ENSCCAG00000029474	SRRM1	100	96.681	Cebus_capucinus
ENSFDAG00000009903	SRRM1	100	97.705	ENSCLAG00000014592	SRRM1	100	97.705	Chinchilla_lanigera
ENSFDAG00000009903	SRRM1	74	96.944	ENSCHOG00000000027	SRRM1	71	96.944	Choloepus_hoffmanni
ENSFDAG00000009903	SRRM1	98	91.444	ENSDNOG00000049141	SRRM1	99	91.444	Dasypus_novemcinctus
ENSFDAG00000009903	SRRM1	100	94.656	ENSEASG00005004270	SRRM1	100	94.656	Equus_asinus_asinus
ENSFDAG00000009903	SRRM1	100	96.235	ENSECAG00000026981	SRRM1	100	96.235	Equus_caballus
ENSFDAG00000009903	SRRM1	100	97.124	ENSFCAG00000000678	-	100	97.124	Felis_catus
ENSFDAG00000009903	SRRM1	100	97.345	ENSGGOG00000005209	SRRM1	100	97.345	Gorilla_gorilla
ENSFDAG00000009903	SRRM1	100	98.907	ENSHGLG00000017105	SRRM1	100	98.907	Heterocephalus_glaber_female
ENSFDAG00000009903	SRRM1	99	98.653	ENSHGLG00100016772	SRRM1	99	98.653	Heterocephalus_glaber_male
ENSFDAG00000009903	SRRM1	100	97.821	ENSSTOG00000014640	SRRM1	100	97.821	Ictidomys_tridecemlineatus
ENSFDAG00000009903	SRRM1	100	94.155	ENSLAFG00000013830	SRRM1	100	94.155	Loxodonta_africana
ENSFDAG00000009903	SRRM1	60	76.852	ENSMFAG00000038841	-	61	74.849	Macaca_fascicularis
ENSFDAG00000009903	SRRM1	55	78.068	ENSMMUG00000039269	-	59	74.648	Macaca_mulatta
ENSFDAG00000009903	SRRM1	59	67.910	ENSMLEG00000032221	-	58	69.960	Mandrillus_leucophaeus
ENSFDAG00000009903	SRRM1	100	97.059	ENSMICG00000006553	SRRM1	100	97.059	Microcebus_murinus
ENSFDAG00000009903	SRRM1	56	98.206	ENSMUSG00000028809	Srrm1	100	85.965	Mus_musculus
ENSFDAG00000009903	SRRM1	51	98.324	MGP_PahariEiJ_G0028969	Srrm1	100	85.965	Mus_pahari
ENSFDAG00000009903	SRRM1	100	94.035	ENSNGAG00000014562	Srrm1	100	95.553	Nannospalax_galili
ENSFDAG00000009903	SRRM1	100	97.345	ENSNLEG00000008966	SRRM1	100	97.345	Nomascus_leucogenys
ENSFDAG00000009903	SRRM1	54	87.541	ENSMEUG00000014704	SRRM1	53	82.623	Notamacropus_eugenii
ENSFDAG00000009903	SRRM1	100	96.300	ENSOCUG00000008438	SRRM1	100	96.300	Oryctolagus_cuniculus
ENSFDAG00000009903	SRRM1	92	97.396	ENSOARG00000006453	SRRM1	99	97.396	Ovis_aries
ENSFDAG00000009903	SRRM1	100	97.235	ENSPPAG00000043918	SRRM1	100	97.235	Pan_paniscus
ENSFDAG00000009903	SRRM1	100	97.124	ENSPPRG00000002509	SRRM1	100	97.124	Panthera_pardus
ENSFDAG00000009903	SRRM1	100	97.386	ENSPTRG00000000349	SRRM1	100	97.386	Pan_troglodytes
ENSFDAG00000009903	SRRM1	55	76.613	ENSPANG00000035568	-	59	70.968	Papio_anubis
ENSFDAG00000009903	SRRM1	100	96.732	ENSPPYG00000001716	SRRM1	100	96.732	Pongo_abelii
ENSFDAG00000009903	SRRM1	100	96.844	ENSPCOG00000021311	SRRM1	100	96.844	Propithecus_coquereli
ENSFDAG00000009903	SRRM1	100	96.623	ENSPVAG00000005836	SRRM1	100	96.623	Pteropus_vampyrus
ENSFDAG00000009903	SRRM1	100	95.098	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSFDAG00000009903	SRRM1	61	92.131	ENSSARG00000013718	SRRM1	60	92.131	Sorex_araneus
ENSFDAG00000009903	SRRM1	99	96.817	ENSSSCG00000032947	SRRM1	100	96.701	Sus_scrofa
ENSFDAG00000009903	SRRM1	100	96.725	ENSTBEG00000000100	SRRM1	100	96.725	Tupaia_belangeri
ENSFDAG00000009903	SRRM1	99	96.158	ENSTTRG00000009365	SRRM1	100	96.158	Tursiops_truncatus
ENSFDAG00000009903	SRRM1	88	97.995	ENSUMAG00000013121	SRRM1	95	97.995	Ursus_maritimus
ENSFDAG00000009903	SRRM1	99	94.413	ENSVVUG00000026966	SRRM1	97	94.413	Vulpes_vulpes