EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000010169 (Gene tree)
Gene ID: 104868597
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 34813 bases
Position: chrKN122609.1:2358308-2393120
Accession: 104868597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000018002	RRM_1	PF00076.22	1.2e-54	1	3
ENSFDAP00000018002	RRM_1	PF00076.22	1.2e-54	2	3
ENSFDAP00000018002	RRM_1	PF00076.22	1.2e-54	3	3
ENSFDAP00000017991	RRM_1	PF00076.22	1.5e-54	1	3
ENSFDAP00000017991	RRM_1	PF00076.22	1.5e-54	2	3
ENSFDAP00000017991	RRM_1	PF00076.22	1.5e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000013959	RBM28-201	2238	-	ENSFDAP00000018002	745 (aa)	-	-
ENSFDAT00000013968	RBM28-202	2535	XM_010633443	ENSFDAP00000017991	757 (aa)	XP_010631745	A0A091DE24

Gene Model

Click here to download ENSFDAG00000010169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000010169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000010169	RBM28	57	30.811	ENSFDAG00000008291	PABPC1L	61	30.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000010169	RBM28	100	85.677	ENSG00000106344	RBM28	100	92.500	Homo_sapiens
ENSFDAG00000010169	RBM28	58	54.751	ENSAPOG00000015512	rbm28	100	51.279	Acanthochromis_polyacanthus
ENSFDAG00000010169	RBM28	100	86.458	ENSAMEG00000004776	RBM28	92	86.458	Ailuropoda_melanoleuca
ENSFDAG00000010169	RBM28	56	55.213	ENSACIG00000023153	rbm28	99	51.592	Amphilophus_citrinellus
ENSFDAG00000010169	RBM28	58	54.751	ENSAOCG00000000462	rbm28	100	51.733	Amphiprion_ocellaris
ENSFDAG00000010169	RBM28	58	54.318	ENSAPEG00000012996	rbm28	100	51.094	Amphiprion_percula
ENSFDAG00000010169	RBM28	59	51.477	ENSATEG00000001672	rbm28	100	47.880	Anabas_testudineus
ENSFDAG00000010169	RBM28	100	85.639	ENSANAG00000033922	RBM28	100	84.901	Aotus_nancymaae
ENSFDAG00000010169	RBM28	100	50.000	ENSACLG00000025024	rbm28	100	50.960	Astatotilapia_calliptera
ENSFDAG00000010169	RBM28	59	56.726	ENSAMXG00000000763	rbm28	99	57.859	Astyanax_mexicanus
ENSFDAG00000010169	RBM28	100	82.157	ENSBTAG00000017001	RBM28	100	92.500	Bos_taurus
ENSFDAG00000010169	RBM28	100	84.121	ENSCJAG00000017731	RBM28	100	83.990	Callithrix_jacchus
ENSFDAG00000010169	RBM28	100	83.888	ENSCAFG00000001667	RBM28	100	84.554	Canis_familiaris
ENSFDAG00000010169	RBM28	100	83.888	ENSCAFG00020021648	RBM28	100	84.554	Canis_lupus_dingo
ENSFDAG00000010169	RBM28	100	81.806	ENSCHIG00000014146	RBM28	100	82.470	Capra_hircus
ENSFDAG00000010169	RBM28	100	82.962	ENSTSYG00000002892	RBM28	100	87.500	Carlito_syrichta
ENSFDAG00000010169	RBM28	83	68.650	ENSCAPG00000013218	RBM28	100	68.650	Cavia_aperea
ENSFDAG00000010169	RBM28	100	89.592	ENSCPOG00000006253	RBM28	100	89.460	Cavia_porcellus
ENSFDAG00000010169	RBM28	100	84.717	ENSCCAG00000035105	RBM28	100	84.585	Cebus_capucinus
ENSFDAG00000010169	RBM28	100	84.383	ENSCATG00000040497	RBM28	100	90.000	Cercocebus_atys
ENSFDAG00000010169	RBM28	100	86.303	ENSCLAG00000003707	RBM28	100	86.968	Chinchilla_lanigera
ENSFDAG00000010169	RBM28	100	85.375	ENSCSAG00000010161	RBM28	100	84.717	Chlorocebus_sabaeus
ENSFDAG00000010169	RBM28	57	84.677	ENSCHOG00000001994	-	63	84.677	Choloepus_hoffmanni
ENSFDAG00000010169	RBM28	50	61.628	ENSCPBG00000018088	RBM28	80	62.326	Chrysemys_picta_bellii
ENSFDAG00000010169	RBM28	90	86.503	ENSCANG00000038397	RBM28	100	92.500	Colobus_angolensis_palliatus
ENSFDAG00000010169	RBM28	67	84.073	ENSCGRG00001021278	Rbm28	100	79.770	Cricetulus_griseus_chok1gshd
ENSFDAG00000010169	RBM28	100	81.234	ENSCGRG00000005098	Rbm28	100	81.234	Cricetulus_griseus_crigri
ENSFDAG00000010169	RBM28	100	51.220	ENSCSEG00000004212	rbm28	100	50.515	Cynoglossus_semilaevis
ENSFDAG00000010169	RBM28	59	55.531	ENSCVAG00000010493	rbm28	99	49.310	Cyprinodon_variegatus
ENSFDAG00000010169	RBM28	100	47.442	ENSDARG00000025332	rbm28	100	46.977	Danio_rerio
ENSFDAG00000010169	RBM28	100	82.345	ENSDNOG00000001124	RBM28	100	82.982	Dasypus_novemcinctus
ENSFDAG00000010169	RBM28	66	82.863	ENSDORG00000004184	Rbm28	97	82.863	Dipodomys_ordii
ENSFDAG00000010169	RBM28	69	39.272	FBgn0260456	CG4806	68	39.148	Drosophila_melanogaster
ENSFDAG00000010169	RBM28	100	72.800	ENSETEG00000007130	RBM28	99	72.933	Echinops_telfairi
ENSFDAG00000010169	RBM28	99	42.133	ENSEBUG00000004419	rbm28	98	41.036	Eptatretus_burgeri
ENSFDAG00000010169	RBM28	100	83.181	ENSEASG00005008528	RBM28	100	83.703	Equus_asinus_asinus
ENSFDAG00000010169	RBM28	100	82.422	ENSECAG00000007745	RBM28	100	83.203	Equus_caballus
ENSFDAG00000010169	RBM28	100	74.050	ENSEEUG00000002389	RBM28	100	74.050	Erinaceus_europaeus
ENSFDAG00000010169	RBM28	100	51.584	ENSELUG00000020602	rbm28	100	51.527	Esox_lucius
ENSFDAG00000010169	RBM28	100	83.512	ENSFCAG00000000946	RBM28	100	92.500	Felis_catus
ENSFDAG00000010169	RBM28	59	56.152	ENSGAFG00000004802	rbm28	96	56.404	Gambusia_affinis
ENSFDAG00000010169	RBM28	58	55.479	ENSGACG00000012612	rbm28	100	51.592	Gasterosteus_aculeatus
ENSFDAG00000010169	RBM28	83	71.000	ENSGAGG00000008873	RBM28	89	79.121	Gopherus_agassizii
ENSFDAG00000010169	RBM28	95	84.882	ENSGGOG00000004644	RBM28	97	84.743	Gorilla_gorilla
ENSFDAG00000010169	RBM28	91	50.000	ENSHBUG00000009611	rbm28	94	51.847	Haplochromis_burtoni
ENSFDAG00000010169	RBM28	100	93.298	ENSHGLG00000005409	RBM28	100	93.298	Heterocephalus_glaber_female
ENSFDAG00000010169	RBM28	100	93.298	ENSHGLG00100016458	RBM28	100	93.298	Heterocephalus_glaber_male
ENSFDAG00000010169	RBM28	83	49.479	ENSHCOG00000010597	rbm28	99	42.085	Hippocampus_comes
ENSFDAG00000010169	RBM28	57	50.472	ENSIPUG00000007103	rbm28	95	46.985	Ictalurus_punctatus
ENSFDAG00000010169	RBM28	100	84.987	ENSSTOG00000002169	RBM28	100	85.509	Ictidomys_tridecemlineatus
ENSFDAG00000010169	RBM28	100	77.267	ENSJJAG00000022400	Rbm28	100	77.075	Jaculus_jaculus
ENSFDAG00000010169	RBM28	59	55.506	ENSKMAG00000013348	rbm28	99	51.688	Kryptolebias_marmoratus
ENSFDAG00000010169	RBM28	58	55.580	ENSLBEG00000012998	rbm28	100	50.000	Labrus_bergylta
ENSFDAG00000010169	RBM28	74	56.491	ENSLACG00000010485	-	99	57.829	Latimeria_chalumnae
ENSFDAG00000010169	RBM28	100	61.340	ENSLOCG00000015541	rbm28	79	61.856	Lepisosteus_oculatus
ENSFDAG00000010169	RBM28	100	81.184	ENSLAFG00000010717	RBM28	100	81.110	Loxodonta_africana
ENSFDAG00000010169	RBM28	100	84.908	ENSMFAG00000031036	RBM28	100	90.000	Macaca_fascicularis
ENSFDAG00000010169	RBM28	100	84.797	ENSMMUG00000007250	RBM28	100	90.000	Macaca_mulatta
ENSFDAG00000010169	RBM28	100	84.224	ENSMNEG00000036970	RBM28	100	90.000	Macaca_nemestrina
ENSFDAG00000010169	RBM28	84	84.431	ENSMLEG00000037717	RBM28	100	84.431	Mandrillus_leucophaeus
ENSFDAG00000010169	RBM28	100	51.362	ENSMAMG00000008525	rbm28	100	51.355	Mastacembelus_armatus
ENSFDAG00000010169	RBM28	93	49.319	ENSMZEG00005019625	rbm28	100	50.617	Maylandia_zebra
ENSFDAG00000010169	RBM28	100	77.735	ENSMAUG00000002263	Rbm28	100	78.250	Mesocricetus_auratus
ENSFDAG00000010169	RBM28	93	81.163	ENSMICG00000000107	RBM28	100	81.994	Microcebus_murinus
ENSFDAG00000010169	RBM28	100	81.491	ENSMOCG00000014615	Rbm28	100	81.891	Microtus_ochrogaster
ENSFDAG00000010169	RBM28	58	54.483	ENSMMOG00000008600	rbm28	95	52.288	Mola_mola
ENSFDAG00000010169	RBM28	100	71.279	ENSMODG00000015151	RBM28	100	72.178	Monodelphis_domestica
ENSFDAG00000010169	RBM28	59	53.659	ENSMALG00000006419	rbm28	100	48.293	Monopterus_albus
ENSFDAG00000010169	RBM28	100	82.626	MGP_CAROLIEiJ_G0028162	Rbm28	100	82.626	Mus_caroli
ENSFDAG00000010169	RBM28	100	81.649	ENSMUSG00000029701	Rbm28	100	82.314	Mus_musculus
ENSFDAG00000010169	RBM28	100	82.517	MGP_PahariEiJ_G0021920	Rbm28	100	82.914	Mus_pahari
ENSFDAG00000010169	RBM28	100	82.048	MGP_SPRETEiJ_G0029162	Rbm28	100	82.713	Mus_spretus
ENSFDAG00000010169	RBM28	100	81.926	ENSMPUG00000006511	RBM28	100	81.794	Mustela_putorius_furo
ENSFDAG00000010169	RBM28	100	82.415	ENSMLUG00000002186	RBM28	100	83.224	Myotis_lucifugus
ENSFDAG00000010169	RBM28	100	80.533	ENSNGAG00000017946	-	100	79.733	Nannospalax_galili
ENSFDAG00000010169	RBM28	100	81.926	ENSNGAG00000006480	-	100	81.649	Nannospalax_galili
ENSFDAG00000010169	RBM28	100	84.444	ENSNLEG00000012307	RBM28	100	92.500	Nomascus_leucogenys
ENSFDAG00000010169	RBM28	82	82.500	ENSMEUG00000009611	RBM28	87	82.500	Notamacropus_eugenii
ENSFDAG00000010169	RBM28	90	73.814	ENSOPRG00000015140	RBM28	90	74.808	Ochotona_princeps
ENSFDAG00000010169	RBM28	100	85.356	ENSODEG00000003213	-	100	86.037	Octodon_degus
ENSFDAG00000010169	RBM28	81	88.498	ENSODEG00000013217	-	84	92.965	Octodon_degus
ENSFDAG00000010169	RBM28	59	54.267	ENSONIG00000014924	rbm28	100	49.290	Oreochromis_niloticus
ENSFDAG00000010169	RBM28	100	62.827	ENSOANG00000000815	-	100	63.613	Ornithorhynchus_anatinus
ENSFDAG00000010169	RBM28	100	81.486	ENSOCUG00000003009	RBM28	100	81.877	Oryctolagus_cuniculus
ENSFDAG00000010169	RBM28	99	50.000	ENSORLG00000009636	rbm28	99	51.232	Oryzias_latipes
ENSFDAG00000010169	RBM28	59	56.081	ENSORLG00020002123	rbm28	99	51.102	Oryzias_latipes_hni
ENSFDAG00000010169	RBM28	86	58.852	ENSORLG00015015030	rbm28	97	57.971	Oryzias_latipes_hsok
ENSFDAG00000010169	RBM28	59	55.724	ENSOMEG00000007801	rbm28	100	51.069	Oryzias_melastigma
ENSFDAG00000010169	RBM28	93	87.500	ENSOGAG00000006011	RBM28	100	87.500	Otolemur_garnettii
ENSFDAG00000010169	RBM28	100	82.048	ENSOARG00000002547	RBM28	100	82.470	Ovis_aries
ENSFDAG00000010169	RBM28	100	85.059	ENSPPAG00000041730	RBM28	100	92.500	Pan_paniscus
ENSFDAG00000010169	RBM28	100	83.266	ENSPPRG00000004420	RBM28	100	92.500	Panthera_pardus
ENSFDAG00000010169	RBM28	100	83.646	ENSPTIG00000008550	RBM28	100	92.500	Panthera_tigris_altaica
ENSFDAG00000010169	RBM28	100	85.321	ENSPTRG00000019659	RBM28	100	92.500	Pan_troglodytes
ENSFDAG00000010169	RBM28	100	84.535	ENSPANG00000022295	RBM28	100	90.000	Papio_anubis
ENSFDAG00000010169	RBM28	99	51.195	ENSPKIG00000023453	rbm28	99	50.868	Paramormyrops_kingsleyae
ENSFDAG00000010169	RBM28	61	51.209	ENSPMGG00000012840	rbm28	100	49.128	Periophthalmus_magnuspinnatus
ENSFDAG00000010169	RBM28	100	80.079	ENSPEMG00000020673	Rbm28	100	80.452	Peromyscus_maniculatus_bairdii
ENSFDAG00000010169	RBM28	100	71.921	ENSPCIG00000012810	RBM28	100	72.185	Phascolarctos_cinereus
ENSFDAG00000010169	RBM28	59	55.310	ENSPFOG00000018209	rbm28	100	49.305	Poecilia_formosa
ENSFDAG00000010169	RBM28	58	54.545	ENSPLAG00000016078	rbm28	96	50.000	Poecilia_latipinna
ENSFDAG00000010169	RBM28	59	55.702	ENSPMEG00000004292	rbm28	100	49.560	Poecilia_mexicana
ENSFDAG00000010169	RBM28	57	54.751	ENSPREG00000014287	rbm28	98	50.065	Poecilia_reticulata
ENSFDAG00000010169	RBM28	100	86.034	ENSPPYG00000017975	RBM28	100	85.771	Pongo_abelii
ENSFDAG00000010169	RBM28	75	75.211	ENSPCAG00000008223	RBM28	82	75.211	Procavia_capensis
ENSFDAG00000010169	RBM28	100	82.682	ENSPCOG00000016797	RBM28	100	92.500	Propithecus_coquereli
ENSFDAG00000010169	RBM28	78	91.628	ENSPVAG00000005443	RBM28	77	91.628	Pteropus_vampyrus
ENSFDAG00000010169	RBM28	100	49.618	ENSPNYG00000014003	rbm28	100	50.383	Pundamilia_nyererei
ENSFDAG00000010169	RBM28	100	80.265	ENSRNOG00000005468	Rbm28	100	80.795	Rattus_norvegicus
ENSFDAG00000010169	RBM28	100	84.424	ENSRBIG00000033990	RBM28	100	92.500	Rhinopithecus_bieti
ENSFDAG00000010169	RBM28	100	84.666	ENSRROG00000040747	RBM28	100	92.500	Rhinopithecus_roxellana
ENSFDAG00000010169	RBM28	91	79.058	ENSSBOG00000012308	RBM28	100	78.796	Saimiri_boliviensis_boliviensis
ENSFDAG00000010169	RBM28	96	68.144	ENSSHAG00000017017	RBM28	99	68.144	Sarcophilus_harrisii
ENSFDAG00000010169	RBM28	59	57.399	ENSSFOG00015001231	rbm28	100	54.029	Scleropages_formosus
ENSFDAG00000010169	RBM28	59	53.515	ENSSMAG00000003885	rbm28	95	50.427	Scophthalmus_maximus
ENSFDAG00000010169	RBM28	59	56.195	ENSSLDG00000020099	rbm28	100	50.127	Seriola_lalandi_dorsalis
ENSFDAG00000010169	RBM28	78	84.211	ENSSARG00000008303	RBM28	81	84.211	Sorex_araneus
ENSFDAG00000010169	RBM28	67	70.588	ENSSPUG00000000838	RBM28	78	70.588	Sphenodon_punctatus
ENSFDAG00000010169	RBM28	58	52.876	ENSSPAG00000023305	rbm28	100	48.579	Stegastes_partitus
ENSFDAG00000010169	RBM28	100	82.199	ENSSSCG00000031847	RBM28	100	82.237	Sus_scrofa
ENSFDAG00000010169	RBM28	99	50.837	ENSTNIG00000017962	rbm28	99	50.450	Tetraodon_nigroviridis
ENSFDAG00000010169	RBM28	86	88.757	ENSTBEG00000012749	RBM28	86	88.757	Tupaia_belangeri
ENSFDAG00000010169	RBM28	100	79.737	ENSTTRG00000013647	RBM28	100	80.000	Tursiops_truncatus
ENSFDAG00000010169	RBM28	100	75.885	ENSUAMG00000006949	RBM28	100	76.680	Ursus_americanus
ENSFDAG00000010169	RBM28	100	83.399	ENSUMAG00000005997	RBM28	100	83.862	Ursus_maritimus
ENSFDAG00000010169	RBM28	88	75.151	ENSVPAG00000008304	RBM28	87	75.988	Vicugna_pacos
ENSFDAG00000010169	RBM28	100	83.622	ENSVVUG00000007270	RBM28	100	84.288	Vulpes_vulpes
ENSFDAG00000010169	RBM28	99	55.300	ENSXETG00000009271	rbm28	99	55.355	Xenopus_tropicalis
ENSFDAG00000010169	RBM28	59	53.229	ENSXCOG00000020357	rbm28	98	52.000	Xiphophorus_couchianus
ENSFDAG00000010169	RBM28	58	55.134	ENSXMAG00000004415	rbm28	100	49.747	Xiphophorus_maculatus