EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000010368 (Gene tree)
Gene ID: 104858347
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 78339 bases
Position: chrKN121670.1:1930512-2008850
Accession: 104858347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000017726	Ago_hook	PF10427.9	4.3e-22	1	1
ENSFDAP00000017726	RRM_1	PF00076.22	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000014188	TNRC6C-201	6180	XM_010618484	ENSFDAP00000017726	1733 (aa)	XP_010616786	-

Gene Model

Click here to download ENSFDAG00000010368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000010368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000010368	TNRC6C	99	34.863	ENSFDAG00000021368	TNRC6B	88	35.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000010368	TNRC6C	100	89.630	ENSG00000078687	TNRC6C	100	91.361	Homo_sapiens
ENSFDAG00000010368	TNRC6C	78	55.460	ENSAPOG00000019749	tnrc6c1	96	50.963	Acanthochromis_polyacanthus
ENSFDAG00000010368	TNRC6C	99	86.247	ENSAMEG00000013756	TNRC6C	99	86.414	Ailuropoda_melanoleuca
ENSFDAG00000010368	TNRC6C	99	47.386	ENSACIG00000008075	tnrc6c1	96	52.820	Amphilophus_citrinellus
ENSFDAG00000010368	TNRC6C	75	68.640	ENSAOCG00000023968	tnrc6c1	97	49.784	Amphiprion_ocellaris
ENSFDAG00000010368	TNRC6C	78	54.597	ENSAPEG00000009020	tnrc6c1	97	50.272	Amphiprion_percula
ENSFDAG00000010368	TNRC6C	100	84.225	ENSAPLG00000005456	TNRC6C	93	83.630	Anas_platyrhynchos
ENSFDAG00000010368	TNRC6C	100	84.918	ENSACAG00000016198	TNRC6C	91	84.299	Anolis_carolinensis
ENSFDAG00000010368	TNRC6C	100	89.119	ENSANAG00000021554	TNRC6C	100	91.060	Aotus_nancymaae
ENSFDAG00000010368	TNRC6C	99	47.283	ENSACLG00000000424	tnrc6c1	97	48.146	Astatotilapia_calliptera
ENSFDAG00000010368	TNRC6C	100	85.827	ENSBTAG00000018658	TNRC6C	100	88.396	Bos_taurus
ENSFDAG00000010368	TNRC6C	100	89.288	ENSCJAG00000019431	TNRC6C	100	90.941	Callithrix_jacchus
ENSFDAG00000010368	TNRC6C	99	88.113	ENSCAFG00000005224	TNRC6C	92	88.282	Canis_familiaris
ENSFDAG00000010368	TNRC6C	99	89.794	ENSCAFG00020006661	TNRC6C	100	89.389	Canis_lupus_dingo
ENSFDAG00000010368	TNRC6C	100	87.730	ENSCHIG00000026004	TNRC6C	100	86.733	Capra_hircus
ENSFDAG00000010368	TNRC6C	97	91.183	ENSTSYG00000005403	TNRC6C	100	90.893	Carlito_syrichta
ENSFDAG00000010368	TNRC6C	100	87.945	ENSCAPG00000007307	TNRC6C	92	87.830	Cavia_aperea
ENSFDAG00000010368	TNRC6C	100	93.368	ENSCPOG00000000467	TNRC6C	100	93.368	Cavia_porcellus
ENSFDAG00000010368	TNRC6C	100	89.736	ENSCCAG00000030524	TNRC6C	100	91.474	Cebus_capucinus
ENSFDAG00000010368	TNRC6C	100	89.624	ENSCATG00000033135	TNRC6C	100	91.297	Cercocebus_atys
ENSFDAG00000010368	TNRC6C	100	95.965	ENSCLAG00000011139	TNRC6C	92	95.504	Chinchilla_lanigera
ENSFDAG00000010368	TNRC6C	99	90.023	ENSCSAG00000005167	TNRC6C	92	89.628	Chlorocebus_sabaeus
ENSFDAG00000010368	TNRC6C	76	90.446	ENSCHOG00000000088	TNRC6C	75	89.228	Choloepus_hoffmanni
ENSFDAG00000010368	TNRC6C	100	87.119	ENSCPBG00000027960	TNRC6C	100	86.856	Chrysemys_picta_bellii
ENSFDAG00000010368	TNRC6C	100	89.400	ENSCANG00000041771	TNRC6C	100	91.060	Colobus_angolensis_palliatus
ENSFDAG00000010368	TNRC6C	100	89.851	ENSCGRG00001022686	Tnrc6c	100	89.020	Cricetulus_griseus_chok1gshd
ENSFDAG00000010368	TNRC6C	100	90.265	ENSCGRG00000018041	Tnrc6c	100	89.020	Cricetulus_griseus_crigri
ENSFDAG00000010368	TNRC6C	78	53.911	ENSCSEG00000012744	tnrc6c1	93	49.676	Cynoglossus_semilaevis
ENSFDAG00000010368	TNRC6C	99	52.769	ENSDARG00000076847	tnrc6c1	99	53.596	Danio_rerio
ENSFDAG00000010368	TNRC6C	100	88.076	ENSDNOG00000003247	TNRC6C	94	87.852	Dasypus_novemcinctus
ENSFDAG00000010368	TNRC6C	100	86.705	ENSDORG00000004558	Tnrc6c	100	87.198	Dipodomys_ordii
ENSFDAG00000010368	TNRC6C	90	82.855	ENSETEG00000005527	TNRC6C	90	82.942	Echinops_telfairi
ENSFDAG00000010368	TNRC6C	97	91.044	ENSEASG00005004799	TNRC6C	100	91.163	Equus_asinus_asinus
ENSFDAG00000010368	TNRC6C	100	90.726	ENSECAG00000012486	TNRC6C	92	90.841	Equus_caballus
ENSFDAG00000010368	TNRC6C	96	89.171	ENSEEUG00000010008	TNRC6C	96	89.002	Erinaceus_europaeus
ENSFDAG00000010368	TNRC6C	100	85.890	ENSFCAG00000028358	TNRC6C	100	88.948	Felis_catus
ENSFDAG00000010368	TNRC6C	97	83.712	ENSFALG00000000848	TNRC6C	100	83.314	Ficedula_albicollis
ENSFDAG00000010368	TNRC6C	78	51.801	ENSFHEG00000002936	tnrc6c1	97	48.068	Fundulus_heteroclitus
ENSFDAG00000010368	TNRC6C	100	86.141	ENSGALG00000001725	TNRC6C	100	87.663	Gallus_gallus
ENSFDAG00000010368	TNRC6C	99	49.189	ENSGAFG00000019019	tnrc6c1	100	49.750	Gambusia_affinis
ENSFDAG00000010368	TNRC6C	78	54.259	ENSGACG00000012320	tnrc6c1	90	48.874	Gasterosteus_aculeatus
ENSFDAG00000010368	TNRC6C	100	86.609	ENSGAGG00000022043	TNRC6C	98	86.149	Gopherus_agassizii
ENSFDAG00000010368	TNRC6C	100	89.182	ENSGGOG00000011304	TNRC6C	100	91.124	Gorilla_gorilla
ENSFDAG00000010368	TNRC6C	95	51.401	ENSHBUG00000010846	tnrc6c1	100	49.030	Haplochromis_burtoni
ENSFDAG00000010368	TNRC6C	100	96.254	ENSHGLG00000004809	TNRC6C	92	96.254	Heterocephalus_glaber_female
ENSFDAG00000010368	TNRC6C	100	95.525	ENSHGLG00100012597	TNRC6C	92	95.181	Heterocephalus_glaber_male
ENSFDAG00000010368	TNRC6C	99	53.246	ENSIPUG00000000818	tnrc6c1	92	53.191	Ictalurus_punctatus
ENSFDAG00000010368	TNRC6C	100	91.427	ENSSTOG00000009101	TNRC6C	100	90.967	Ictidomys_tridecemlineatus
ENSFDAG00000010368	TNRC6C	100	89.622	ENSJJAG00000017055	Tnrc6c	91	88.819	Jaculus_jaculus
ENSFDAG00000010368	TNRC6C	78	54.212	ENSKMAG00000021023	tnrc6c1	100	50.288	Kryptolebias_marmoratus
ENSFDAG00000010368	TNRC6C	100	74.857	ENSLACG00000015283	TNRC6C	100	74.914	Latimeria_chalumnae
ENSFDAG00000010368	TNRC6C	100	56.562	ENSLOCG00000013377	tnrc6c1	92	56.982	Lepisosteus_oculatus
ENSFDAG00000010368	TNRC6C	100	90.361	ENSLAFG00000011122	TNRC6C	93	89.558	Loxodonta_africana
ENSFDAG00000010368	TNRC6C	100	89.680	ENSMFAG00000043943	TNRC6C	100	91.356	Macaca_fascicularis
ENSFDAG00000010368	TNRC6C	100	90.085	ENSMMUG00000011924	TNRC6C	100	91.356	Macaca_mulatta
ENSFDAG00000010368	TNRC6C	100	89.624	ENSMNEG00000030405	TNRC6C	100	91.297	Macaca_nemestrina
ENSFDAG00000010368	TNRC6C	100	89.680	ENSMLEG00000033436	TNRC6C	100	91.356	Mandrillus_leucophaeus
ENSFDAG00000010368	TNRC6C	92	53.343	ENSMAMG00000023613	tnrc6c1	100	50.000	Mastacembelus_armatus
ENSFDAG00000010368	TNRC6C	97	51.265	ENSMZEG00005010920	tnrc6c1	97	48.146	Maylandia_zebra
ENSFDAG00000010368	TNRC6C	100	78.499	ENSMGAG00000003906	TNRC6C	93	78.331	Meleagris_gallopavo
ENSFDAG00000010368	TNRC6C	97	89.847	ENSMAUG00000021618	Tnrc6c	100	89.315	Mesocricetus_auratus
ENSFDAG00000010368	TNRC6C	100	89.736	ENSMICG00000003952	TNRC6C	100	92.007	Microcebus_murinus
ENSFDAG00000010368	TNRC6C	100	91.244	ENSMOCG00000015879	Tnrc6c	100	91.244	Microtus_ochrogaster
ENSFDAG00000010368	TNRC6C	76	56.453	ENSMMOG00000005203	tnrc6c1	100	51.272	Mola_mola
ENSFDAG00000010368	TNRC6C	100	85.567	ENSMODG00000001785	TNRC6C	92	84.937	Monodelphis_domestica
ENSFDAG00000010368	TNRC6C	100	91.417	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	90.899	Mus_caroli
ENSFDAG00000010368	TNRC6C	100	91.187	ENSMUSG00000025571	Tnrc6c	100	90.668	Mus_musculus
ENSFDAG00000010368	TNRC6C	100	91.590	MGP_PahariEiJ_G0018593	Tnrc6c	100	91.071	Mus_pahari
ENSFDAG00000010368	TNRC6C	100	91.244	MGP_SPRETEiJ_G0018309	Tnrc6c	100	90.726	Mus_spretus
ENSFDAG00000010368	TNRC6C	99	85.175	ENSMPUG00000013348	TNRC6C	91	85.577	Mustela_putorius_furo
ENSFDAG00000010368	TNRC6C	100	81.620	ENSMLUG00000014431	TNRC6C	91	82.245	Myotis_lucifugus
ENSFDAG00000010368	TNRC6C	100	91.509	ENSNGAG00000012203	Tnrc6c	92	90.993	Nannospalax_galili
ENSFDAG00000010368	TNRC6C	99	47.967	ENSNBRG00000005344	tnrc6c1	97	48.728	Neolamprologus_brichardi
ENSFDAG00000010368	TNRC6C	99	87.374	ENSNLEG00000000047	TNRC6C	92	86.813	Nomascus_leucogenys
ENSFDAG00000010368	TNRC6C	98	80.400	ENSMEUG00000005104	TNRC6C	100	80.283	Notamacropus_eugenii
ENSFDAG00000010368	TNRC6C	97	95.309	ENSODEG00000012499	TNRC6C	100	95.309	Octodon_degus
ENSFDAG00000010368	TNRC6C	95	54.141	ENSONIG00000002210	tnrc6c1	96	51.907	Oreochromis_niloticus
ENSFDAG00000010368	TNRC6C	100	76.596	ENSOANG00000009758	-	91	76.596	Ornithorhynchus_anatinus
ENSFDAG00000010368	TNRC6C	99	47.786	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSFDAG00000010368	TNRC6C	99	46.999	ENSORLG00020016510	tnrc6c1	100	48.554	Oryzias_latipes_hni
ENSFDAG00000010368	TNRC6C	81	43.298	ENSORLG00015000171	tnrc6c1	98	43.698	Oryzias_latipes_hsok
ENSFDAG00000010368	TNRC6C	99	48.455	ENSOMEG00000000357	tnrc6c1	97	49.109	Oryzias_melastigma
ENSFDAG00000010368	TNRC6C	97	89.507	ENSOGAG00000007197	TNRC6C	100	89.153	Otolemur_garnettii
ENSFDAG00000010368	TNRC6C	96	83.186	ENSOARG00000006041	TNRC6C	89	83.462	Ovis_aries
ENSFDAG00000010368	TNRC6C	100	89.680	ENSPPAG00000027160	TNRC6C	100	91.356	Pan_paniscus
ENSFDAG00000010368	TNRC6C	100	86.058	ENSPPRG00000018881	TNRC6C	100	89.066	Panthera_pardus
ENSFDAG00000010368	TNRC6C	91	84.946	ENSPTIG00000008791	TNRC6C	86	84.946	Panthera_tigris_altaica
ENSFDAG00000010368	TNRC6C	100	89.680	ENSPTRG00000009699	TNRC6C	100	91.356	Pan_troglodytes
ENSFDAG00000010368	TNRC6C	100	89.680	ENSPANG00000019994	TNRC6C	100	91.874	Papio_anubis
ENSFDAG00000010368	TNRC6C	90	61.443	ENSPKIG00000005428	tnrc6c1	100	50.278	Paramormyrops_kingsleyae
ENSFDAG00000010368	TNRC6C	100	85.000	ENSPSIG00000018069	TNRC6C	100	84.598	Pelodiscus_sinensis
ENSFDAG00000010368	TNRC6C	63	54.839	ENSPMGG00000022911	tnrc6c1	97	63.158	Periophthalmus_magnuspinnatus
ENSFDAG00000010368	TNRC6C	100	91.107	ENSPEMG00000009785	Tnrc6c	100	88.659	Peromyscus_maniculatus_bairdii
ENSFDAG00000010368	TNRC6C	56	84.259	ENSPCIG00000017421	-	99	84.156	Phascolarctos_cinereus
ENSFDAG00000010368	TNRC6C	99	49.110	ENSPFOG00000012560	tnrc6c1	97	55.824	Poecilia_formosa
ENSFDAG00000010368	TNRC6C	97	49.582	ENSPLAG00000021055	tnrc6c1	100	50.000	Poecilia_latipinna
ENSFDAG00000010368	TNRC6C	100	90.197	ENSPPYG00000008679	TNRC6C	91	89.803	Pongo_abelii
ENSFDAG00000010368	TNRC6C	93	92.180	ENSPCAG00000012510	TNRC6C	94	92.180	Procavia_capensis
ENSFDAG00000010368	TNRC6C	97	92.066	ENSPCOG00000021451	TNRC6C	100	92.422	Propithecus_coquereli
ENSFDAG00000010368	TNRC6C	96	87.589	ENSPVAG00000002008	TNRC6C	95	88.529	Pteropus_vampyrus
ENSFDAG00000010368	TNRC6C	95	51.158	ENSPNYG00000014477	tnrc6c1	100	48.701	Pundamilia_nyererei
ENSFDAG00000010368	TNRC6C	97	90.521	ENSRNOG00000022395	Tnrc6c	100	90.640	Rattus_norvegicus
ENSFDAG00000010368	TNRC6C	100	89.568	ENSRBIG00000027777	TNRC6C	100	91.237	Rhinopithecus_bieti
ENSFDAG00000010368	TNRC6C	100	89.624	ENSRROG00000042912	TNRC6C	100	91.297	Rhinopithecus_roxellana
ENSFDAG00000010368	TNRC6C	100	89.477	ENSSBOG00000023981	TNRC6C	100	89.275	Saimiri_boliviensis_boliviensis
ENSFDAG00000010368	TNRC6C	51	86.580	ENSSHAG00000018330	-	100	85.823	Sarcophilus_harrisii
ENSFDAG00000010368	TNRC6C	91	58.685	ENSSFOG00015006475	tnrc6c1	94	52.577	Scleropages_formosus
ENSFDAG00000010368	TNRC6C	86	56.531	ENSSFOG00015004735	-	99	60.836	Scleropages_formosus
ENSFDAG00000010368	TNRC6C	99	48.846	ENSSMAG00000012761	tnrc6c1	99	51.034	Scophthalmus_maximus
ENSFDAG00000010368	TNRC6C	99	50.527	ENSSDUG00000002366	tnrc6c1	96	51.722	Seriola_dumerili
ENSFDAG00000010368	TNRC6C	97	49.472	ENSSLDG00000025613	tnrc6c1	100	50.610	Seriola_lalandi_dorsalis
ENSFDAG00000010368	TNRC6C	91	89.224	ENSSARG00000006816	TNRC6C	91	89.076	Sorex_araneus
ENSFDAG00000010368	TNRC6C	80	83.461	ENSSPUG00000007341	TNRC6C	91	82.835	Sphenodon_punctatus
ENSFDAG00000010368	TNRC6C	76	54.048	ENSSPAG00000014977	tnrc6c1	96	49.347	Stegastes_partitus
ENSFDAG00000010368	TNRC6C	97	85.460	ENSSSCG00000034373	TNRC6C	100	87.480	Sus_scrofa
ENSFDAG00000010368	TNRC6C	100	87.471	ENSTGUG00000007733	TNRC6C	100	87.011	Taeniopygia_guttata
ENSFDAG00000010368	TNRC6C	93	54.193	ENSTRUG00000011685	tnrc6c1	100	49.310	Takifugu_rubripes
ENSFDAG00000010368	TNRC6C	95	54.993	ENSTNIG00000005273	tnrc6c1	100	59.470	Tetraodon_nigroviridis
ENSFDAG00000010368	TNRC6C	61	90.234	ENSTBEG00000005046	TNRC6C	93	90.234	Tupaia_belangeri
ENSFDAG00000010368	TNRC6C	100	89.885	ENSTTRG00000010828	TNRC6C	99	89.885	Tursiops_truncatus
ENSFDAG00000010368	TNRC6C	99	87.457	ENSUMAG00000013614	TNRC6C	92	87.572	Ursus_maritimus
ENSFDAG00000010368	TNRC6C	50	81.072	ENSVPAG00000006765	-	99	81.078	Vicugna_pacos
ENSFDAG00000010368	TNRC6C	97	90.694	ENSVVUG00000015268	TNRC6C	100	90.812	Vulpes_vulpes
ENSFDAG00000010368	TNRC6C	97	74.824	ENSXETG00000019470	tnrc6c	100	74.412	Xenopus_tropicalis
ENSFDAG00000010368	TNRC6C	99	49.972	ENSXMAG00000025971	tnrc6c1	100	49.443	Xiphophorus_maculatus