EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000010370 (Gene tree)
Gene ID: 104851868
Gene Symbol: PAPOLA
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 46588 bases
Position: chrKN124392.1:3993214-4039801
Accession: 104851868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000017764	PAP_RNA-bind	PF04926.15	4.4e-25	1	1
ENSFDAP00000017757	PAP_RNA-bind	PF04926.15	4.6e-25	1	1
ENSFDAP00000017768	PAP_RNA-bind	PF04926.15	4.6e-25	1	1
ENSFDAP00000017760	PAP_RNA-bind	PF04926.15	2.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000014162	PAPOLA-204	2220	-	ENSFDAP00000017757	739 (aa)	-	-
ENSFDAT00000014155	PAPOLA-203	2187	XM_010609238	ENSFDAP00000017760	728 (aa)	XP_010607540	-
ENSFDAT00000014148	PAPOLA-202	2124	-	ENSFDAP00000017764	707 (aa)	-	-
ENSFDAT00000014142	PAPOLA-201	2049	-	ENSFDAP00000017768	682 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000010370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000010370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000010370	PAPOLA	99	61.781	ENSFDAG00000010662	PAPOLG	96	61.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000010370	PAPOLA	100	95.973	ENSG00000090060	PAPOLA	97	99.275	Homo_sapiens
ENSFDAG00000010370	PAPOLA	100	96.211	ENSAMEG00000014142	PAPOLA	99	96.211	Ailuropoda_melanoleuca
ENSFDAG00000010370	PAPOLA	100	89.973	ENSAPLG00000006645	PAPOLA	99	89.973	Anas_platyrhynchos
ENSFDAG00000010370	PAPOLA	100	90.909	ENSACAG00000013474	PAPOLA	99	94.777	Anolis_carolinensis
ENSFDAG00000010370	PAPOLA	78	91.337	ENSANAG00000027941	-	98	91.337	Aotus_nancymaae
ENSFDAG00000010370	PAPOLA	100	96.522	ENSANAG00000018274	PAPOLA	99	99.081	Aotus_nancymaae
ENSFDAG00000010370	PAPOLA	100	73.420	ENSAMXG00000018141	papola	98	85.507	Astyanax_mexicanus
ENSFDAG00000010370	PAPOLA	100	96.232	ENSBTAG00000004054	PAPOLA	99	96.232	Bos_taurus
ENSFDAG00000010370	PAPOLA	100	95.833	ENSCJAG00000006512	PAPOLA	99	99.081	Callithrix_jacchus
ENSFDAG00000010370	PAPOLA	100	96.076	ENSCAFG00000017783	PAPOLA	99	96.076	Canis_familiaris
ENSFDAG00000010370	PAPOLA	99	96.070	ENSCAFG00020011550	PAPOLA	99	95.938	Canis_lupus_dingo
ENSFDAG00000010370	PAPOLA	99	95.794	ENSCHIG00000025004	-	99	95.794	Capra_hircus
ENSFDAG00000010370	PAPOLA	100	95.797	ENSTSYG00000012384	PAPOLA	99	95.797	Carlito_syrichta
ENSFDAG00000010370	PAPOLA	100	93.623	ENSCPOG00000002648	PAPOLA	99	93.623	Cavia_porcellus
ENSFDAG00000010370	PAPOLA	100	95.705	ENSCCAG00000025120	PAPOLA	98	98.887	Cebus_capucinus
ENSFDAG00000010370	PAPOLA	100	95.977	ENSCATG00000018815	PAPOLA	99	99.441	Cercocebus_atys
ENSFDAG00000010370	PAPOLA	100	97.681	ENSCLAG00000016342	PAPOLA	99	97.681	Chinchilla_lanigera
ENSFDAG00000010370	PAPOLA	100	95.839	ENSCSAG00000010516	PAPOLA	99	95.839	Chlorocebus_sabaeus
ENSFDAG00000010370	PAPOLA	72	80.864	ENSCHOG00000001115	PAPOLA	71	80.864	Choloepus_hoffmanni
ENSFDAG00000010370	PAPOLA	100	91.486	ENSCPBG00000024125	PAPOLA	99	91.486	Chrysemys_picta_bellii
ENSFDAG00000010370	PAPOLA	100	90.738	ENSCANG00000000159	PAPOLA	99	90.738	Colobus_angolensis_palliatus
ENSFDAG00000010370	PAPOLA	100	95.942	ENSCGRG00001022693	-	99	95.942	Cricetulus_griseus_chok1gshd
ENSFDAG00000010370	PAPOLA	100	86.604	ENSCGRG00001000229	-	99	89.015	Cricetulus_griseus_chok1gshd
ENSFDAG00000010370	PAPOLA	99	82.791	ENSCGRG00001002732	-	99	82.791	Cricetulus_griseus_chok1gshd
ENSFDAG00000010370	PAPOLA	100	83.168	ENSCGRG00000000257	-	99	83.168	Cricetulus_griseus_crigri
ENSFDAG00000010370	PAPOLA	100	95.942	ENSCGRG00000003664	-	100	95.942	Cricetulus_griseus_crigri
ENSFDAG00000010370	PAPOLA	98	80.165	ENSCGRG00000001888	-	96	79.698	Cricetulus_griseus_crigri
ENSFDAG00000010370	PAPOLA	71	53.734	ENSCSEG00000001841	-	71	53.958	Cynoglossus_semilaevis
ENSFDAG00000010370	PAPOLA	100	71.544	ENSDARG00000009585	papola	99	71.508	Danio_rerio
ENSFDAG00000010370	PAPOLA	65	87.924	ENSDORG00000013415	-	100	89.195	Dipodomys_ordii
ENSFDAG00000010370	PAPOLA	100	82.838	ENSETEG00000004889	PAPOLA	100	82.838	Echinops_telfairi
ENSFDAG00000010370	PAPOLA	98	69.742	ENSELUG00000018972	papola	98	69.755	Esox_lucius
ENSFDAG00000010370	PAPOLA	100	96.812	ENSFCAG00000006784	PAPOLA	99	96.812	Felis_catus
ENSFDAG00000010370	PAPOLA	100	96.774	ENSFALG00000002547	PAPOLA	98	86.877	Ficedula_albicollis
ENSFDAG00000010370	PAPOLA	71	70.968	ENSGMOG00000010209	papola	100	66.179	Gadus_morhua
ENSFDAG00000010370	PAPOLA	100	89.281	ENSGALG00000033099	PAPOLA	99	89.281	Gallus_gallus
ENSFDAG00000010370	PAPOLA	70	54.375	ENSGACG00000006142	-	100	53.958	Gasterosteus_aculeatus
ENSFDAG00000010370	PAPOLA	93	95.290	ENSGAGG00000020500	PAPOLA	99	94.529	Gopherus_agassizii
ENSFDAG00000010370	PAPOLA	100	95.973	ENSGGOG00000006287	PAPOLA	99	95.973	Gorilla_gorilla
ENSFDAG00000010370	PAPOLA	99	85.695	ENSHGLG00000017457	-	100	84.741	Heterocephalus_glaber_female
ENSFDAG00000010370	PAPOLA	100	80.247	ENSHGLG00000007467	-	99	80.384	Heterocephalus_glaber_female
ENSFDAG00000010370	PAPOLA	100	97.681	ENSHGLG00000007909	-	99	97.681	Heterocephalus_glaber_female
ENSFDAG00000010370	PAPOLA	100	97.536	ENSHGLG00100017273	PAPOLA	99	97.536	Heterocephalus_glaber_male
ENSFDAG00000010370	PAPOLA	99	68.462	ENSIPUG00000005919	papola	93	82.540	Ictalurus_punctatus
ENSFDAG00000010370	PAPOLA	100	96.957	ENSSTOG00000011471	PAPOLA	99	96.957	Ictidomys_tridecemlineatus
ENSFDAG00000010370	PAPOLA	100	95.652	ENSJJAG00000024340	Papola	100	95.652	Jaculus_jaculus
ENSFDAG00000010370	PAPOLA	100	76.248	ENSLACG00000018136	PAPOLA	99	76.248	Latimeria_chalumnae
ENSFDAG00000010370	PAPOLA	100	65.550	ENSLOCG00000008632	papola	99	65.684	Lepisosteus_oculatus
ENSFDAG00000010370	PAPOLA	100	95.805	ENSLAFG00000000946	PAPOLA	99	95.805	Loxodonta_africana
ENSFDAG00000010370	PAPOLA	100	95.839	ENSMFAG00000001792	PAPOLA	99	99.261	Macaca_fascicularis
ENSFDAG00000010370	PAPOLA	100	95.977	ENSMMUG00000018610	PAPOLA	99	95.977	Macaca_mulatta
ENSFDAG00000010370	PAPOLA	100	95.977	ENSMNEG00000043747	PAPOLA	99	98.162	Macaca_nemestrina
ENSFDAG00000010370	PAPOLA	100	95.839	ENSMLEG00000032066	PAPOLA	99	95.839	Mandrillus_leucophaeus
ENSFDAG00000010370	PAPOLA	84	88.462	ENSMGAG00000013228	-	100	88.462	Meleagris_gallopavo
ENSFDAG00000010370	PAPOLA	100	96.377	ENSMAUG00000017178	Papola	99	96.377	Mesocricetus_auratus
ENSFDAG00000010370	PAPOLA	100	96.957	ENSMICG00000010347	PAPOLA	97	99.441	Microcebus_murinus
ENSFDAG00000010370	PAPOLA	100	96.232	ENSMOCG00000021670	Papola	99	96.232	Microtus_ochrogaster
ENSFDAG00000010370	PAPOLA	100	94.587	ENSMODG00000012887	-	99	94.587	Monodelphis_domestica
ENSFDAG00000010370	PAPOLA	99	80.474	ENSMODG00000001969	-	99	80.614	Monodelphis_domestica
ENSFDAG00000010370	PAPOLA	100	94.928	MGP_CAROLIEiJ_G0018093	Papola	99	94.928	Mus_caroli
ENSFDAG00000010370	PAPOLA	100	95.217	ENSMUSG00000021111	Papola	99	95.217	Mus_musculus
ENSFDAG00000010370	PAPOLA	100	95.217	MGP_PahariEiJ_G0029850	Papola	99	95.217	Mus_pahari
ENSFDAG00000010370	PAPOLA	100	95.362	MGP_SPRETEiJ_G0018943	Papola	99	95.362	Mus_spretus
ENSFDAG00000010370	PAPOLA	100	96.211	ENSMPUG00000003054	PAPOLA	99	96.211	Mustela_putorius_furo
ENSFDAG00000010370	PAPOLA	100	94.317	ENSMLUG00000010922	PAPOLA	99	94.317	Myotis_lucifugus
ENSFDAG00000010370	PAPOLA	100	95.362	ENSNGAG00000022172	Papola	100	94.858	Nannospalax_galili
ENSFDAG00000010370	PAPOLA	100	90.849	ENSNLEG00000000625	PAPOLA	99	90.849	Nomascus_leucogenys
ENSFDAG00000010370	PAPOLA	67	82.222	ENSMEUG00000007831	-	74	81.538	Notamacropus_eugenii
ENSFDAG00000010370	PAPOLA	98	90.746	ENSOPRG00000007625	PAPOLA	100	90.746	Ochotona_princeps
ENSFDAG00000010370	PAPOLA	70	54.202	ENSONIG00000001062	-	96	54.202	Oreochromis_niloticus
ENSFDAG00000010370	PAPOLA	100	95.217	ENSOANG00000013812	PAPOLA	99	95.217	Ornithorhynchus_anatinus
ENSFDAG00000010370	PAPOLA	100	93.108	ENSOCUG00000011531	PAPOLA	99	93.108	Oryctolagus_cuniculus
ENSFDAG00000010370	PAPOLA	100	96.081	ENSOGAG00000004611	PAPOLA	99	96.081	Otolemur_garnettii
ENSFDAG00000010370	PAPOLA	100	95.670	ENSOARG00000016579	-	99	95.670	Ovis_aries
ENSFDAG00000010370	PAPOLA	100	95.973	ENSPPAG00000030505	PAPOLA	99	95.973	Pan_paniscus
ENSFDAG00000010370	PAPOLA	100	96.503	ENSPPRG00000008616	PAPOLA	99	96.503	Panthera_pardus
ENSFDAG00000010370	PAPOLA	100	96.503	ENSPTIG00000018852	PAPOLA	99	96.503	Panthera_tigris_altaica
ENSFDAG00000010370	PAPOLA	100	95.973	ENSPTRG00000006704	PAPOLA	99	95.973	Pan_troglodytes
ENSFDAG00000010370	PAPOLA	100	95.977	ENSPANG00000025582	PAPOLA	98	99.441	Papio_anubis
ENSFDAG00000010370	PAPOLA	95	75.077	ENSPKIG00000014471	papola	99	72.099	Paramormyrops_kingsleyae
ENSFDAG00000010370	PAPOLA	100	91.892	ENSPSIG00000014157	PAPOLA	86	91.892	Pelodiscus_sinensis
ENSFDAG00000010370	PAPOLA	100	96.087	ENSPEMG00000000043	Papola	99	96.087	Peromyscus_maniculatus_bairdii
ENSFDAG00000010370	PAPOLA	100	94.587	ENSPCIG00000013234	PAPOLA	99	94.606	Phascolarctos_cinereus
ENSFDAG00000010370	PAPOLA	100	93.691	ENSPPYG00000006128	PAPOLA	99	93.691	Pongo_abelii
ENSFDAG00000010370	PAPOLA	89	89.074	ENSPCAG00000004199	PAPOLA	100	89.074	Procavia_capensis
ENSFDAG00000010370	PAPOLA	100	93.566	ENSPCOG00000022117	PAPOLA	99	93.566	Propithecus_coquereli
ENSFDAG00000010370	PAPOLA	100	95.129	ENSPVAG00000013925	PAPOLA	99	95.129	Pteropus_vampyrus
ENSFDAG00000010370	PAPOLA	100	72.482	ENSPNAG00000010467	papola	99	72.057	Pygocentrus_nattereri
ENSFDAG00000010370	PAPOLA	100	93.911	ENSRNOG00000004827	Papola	99	93.911	Rattus_norvegicus
ENSFDAG00000010370	PAPOLA	100	95.259	ENSRBIG00000038490	PAPOLA	98	98.127	Rhinopithecus_bieti
ENSFDAG00000010370	PAPOLA	100	95.839	ENSRROG00000025545	PAPOLA	99	95.839	Rhinopithecus_roxellana
ENSFDAG00000010370	PAPOLA	100	95.833	ENSSBOG00000024061	PAPOLA	99	97.963	Saimiri_boliviensis_boliviensis
ENSFDAG00000010370	PAPOLA	100	94.452	ENSSHAG00000015211	PAPOLA	99	94.452	Sarcophilus_harrisii
ENSFDAG00000010370	PAPOLA	98	71.724	ENSSFOG00015004431	papola	99	84.964	Scleropages_formosus
ENSFDAG00000010370	PAPOLA	98	47.291	ENSSDUG00000018247	-	97	46.589	Seriola_dumerili
ENSFDAG00000010370	PAPOLA	98	91.322	ENSSPUG00000005835	PAPOLA	99	91.216	Sphenodon_punctatus
ENSFDAG00000010370	PAPOLA	100	96.667	ENSSSCG00000002505	-	99	96.667	Sus_scrofa
ENSFDAG00000010370	PAPOLA	100	89.688	ENSTGUG00000012687	PAPOLA	99	89.688	Taeniopygia_guttata
ENSFDAG00000010370	PAPOLA	75	88.043	ENSTBEG00000000194	PAPOLA	75	88.043	Tupaia_belangeri
ENSFDAG00000010370	PAPOLA	80	100.000	ENSTTRG00000005717	PAPOLA	74	100.000	Tursiops_truncatus
ENSFDAG00000010370	PAPOLA	62	98.815	ENSUAMG00000025737	PAPOLA	98	98.815	Ursus_americanus
ENSFDAG00000010370	PAPOLA	100	95.399	ENSVPAG00000006464	PAPOLA	100	95.399	Vicugna_pacos
ENSFDAG00000010370	PAPOLA	100	96.522	ENSVVUG00000028340	PAPOLA	99	96.522	Vulpes_vulpes
ENSFDAG00000010370	PAPOLA	100	82.361	ENSXETG00000013949	papola	99	82.361	Xenopus_tropicalis