EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000010581 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 1687 bases
Position: chrKN120636.1:9100680-9102366
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000000272	RRM_1	PF00076.22	3.8e-19	1	1
ENSFDAP00000000276	RRM_1	PF00076.22	4.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000028402	-	1470	-	ENSFDAP00000000276	490 (aa)	-	-
ENSFDAT00000014421	-	1419	-	ENSFDAP00000000272	473 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000010581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000010581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000010581	-	100	46.484	ENSFDAG00000005583	PABPC1	99	47.468
ENSFDAG00000010581	-	97	38.028	ENSFDAG00000008291	PABPC1L	88	39.785
ENSFDAG00000010581	-	100	42.024	ENSFDAG00000018480	PABPC3	89	42.227
ENSFDAG00000010581	-	100	63.866	ENSFDAG00000020016	-	90	68.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000010581	-	100	63.361	ENSG00000090621	PABPC4	96	72.093	Homo_sapiens
ENSFDAG00000010581	-	99	48.547	ENSAPOG00000001161	pabpc4	89	51.674	Acanthochromis_polyacanthus
ENSFDAG00000010581	-	100	62.857	ENSAMEG00000011535	-	90	66.872	Ailuropoda_melanoleuca
ENSFDAG00000010581	-	99	37.319	ENSAMEG00000015083	-	89	38.359	Ailuropoda_melanoleuca
ENSFDAG00000010581	-	99	50.345	ENSACIG00000023343	pabpc4	88	52.654	Amphilophus_citrinellus
ENSFDAG00000010581	-	99	48.889	ENSAOCG00000021529	pabpc4	89	52.092	Amphiprion_ocellaris
ENSFDAG00000010581	-	99	48.889	ENSAPEG00000019196	pabpc4	89	52.092	Amphiprion_percula
ENSFDAG00000010581	-	99	49.655	ENSATEG00000007402	pabpc4	88	51.695	Anabas_testudineus
ENSFDAG00000010581	-	100	55.536	ENSAPLG00000009729	-	90	58.422	Anas_platyrhynchos
ENSFDAG00000010581	-	99	54.991	ENSACAG00000002544	PABPC4	99	57.569	Anolis_carolinensis
ENSFDAG00000010581	-	100	63.361	ENSANAG00000025079	PABPC4	95	66.935	Aotus_nancymaae
ENSFDAG00000010581	-	99	50.000	ENSACLG00000019558	pabpc4	88	52.229	Astatotilapia_calliptera
ENSFDAG00000010581	-	99	48.545	ENSAMXG00000018779	pabpc4	88	48.983	Astyanax_mexicanus
ENSFDAG00000010581	-	100	61.897	ENSBTAG00000017125	PABPC4	90	66.454	Bos_taurus
ENSFDAG00000010581	-	71	73.034	ENSCJAG00000045953	-	95	73.034	Callithrix_jacchus
ENSFDAG00000010581	-	100	63.193	ENSCJAG00000002512	-	90	66.872	Callithrix_jacchus
ENSFDAG00000010581	-	100	62.857	ENSCAFG00000003081	PABPC4	90	63.326	Canis_familiaris
ENSFDAG00000010581	-	100	62.857	ENSCAFG00020004161	PABPC4	90	66.872	Canis_lupus_dingo
ENSFDAG00000010581	-	99	52.459	ENSCHIG00000023385	-	89	52.459	Capra_hircus
ENSFDAG00000010581	-	100	62.857	ENSCHIG00000019398	-	90	66.872	Capra_hircus
ENSFDAG00000010581	-	100	63.193	ENSTSYG00000006532	PABPC4	90	67.284	Carlito_syrichta
ENSFDAG00000010581	-	100	63.529	ENSCAPG00000015984	PABPC4	90	67.695	Cavia_aperea
ENSFDAG00000010581	-	100	63.361	ENSCPOG00000009552	PABPC4	90	67.490	Cavia_porcellus
ENSFDAG00000010581	-	100	63.131	ENSCCAG00000037306	PABPC4	90	67.010	Cebus_capucinus
ENSFDAG00000010581	-	100	63.361	ENSCATG00000042164	PABPC4	95	66.935	Cercocebus_atys
ENSFDAG00000010581	-	100	63.529	ENSCLAG00000011899	PABPC4	90	67.695	Chinchilla_lanigera
ENSFDAG00000010581	-	100	63.361	ENSCSAG00000001135	PABPC4	90	67.490	Chlorocebus_sabaeus
ENSFDAG00000010581	-	81	62.169	ENSCHOG00000005327	PABPC4	81	68.773	Choloepus_hoffmanni
ENSFDAG00000010581	-	100	55.190	ENSCPBG00000001038	PABPC4	90	57.996	Chrysemys_picta_bellii
ENSFDAG00000010581	-	100	63.361	ENSCANG00000034177	PABPC4	91	67.490	Colobus_angolensis_palliatus
ENSFDAG00000010581	-	98	61.670	ENSCGRG00001018166	Pabpc4	90	65.510	Cricetulus_griseus_chok1gshd
ENSFDAG00000010581	-	98	61.121	ENSCGRG00000009777	Pabpc4	91	64.979	Cricetulus_griseus_crigri
ENSFDAG00000010581	-	99	50.344	ENSCSEG00000000130	pabpc4	89	52.431	Cynoglossus_semilaevis
ENSFDAG00000010581	-	99	50.775	ENSCVAG00000019246	pabpc4	90	53.178	Cyprinodon_variegatus
ENSFDAG00000010581	-	99	51.127	ENSDARG00000059259	pabpc4	89	53.390	Danio_rerio
ENSFDAG00000010581	-	97	62.931	ENSDNOG00000018444	-	99	66.946	Dasypus_novemcinctus
ENSFDAG00000010581	-	100	63.040	ENSDORG00000011581	Pabpc4	90	67.234	Dipodomys_ordii
ENSFDAG00000010581	-	93	65.298	ENSETEG00000018453	-	74	65.914	Echinops_telfairi
ENSFDAG00000010581	-	91	50.000	ENSETEG00000009172	-	81	50.989	Echinops_telfairi
ENSFDAG00000010581	-	99	44.905	ENSEBUG00000000992	pabpc4	90	45.319	Eptatretus_burgeri
ENSFDAG00000010581	-	96	45.826	ENSEBUG00000013782	pabpc4	96	46.795	Eptatretus_burgeri
ENSFDAG00000010581	-	100	63.361	ENSEASG00005014119	PABPC4	90	67.490	Equus_asinus_asinus
ENSFDAG00000010581	-	100	63.361	ENSECAG00000009396	PABPC4	90	67.490	Equus_caballus
ENSFDAG00000010581	-	98	60.206	ENSEEUG00000002962	PABPC4	90	64.815	Erinaceus_europaeus
ENSFDAG00000010581	-	99	51.127	ENSELUG00000003195	pabpc4	89	53.814	Esox_lucius
ENSFDAG00000010581	-	100	63.025	ENSFCAG00000015254	-	90	67.078	Felis_catus
ENSFDAG00000010581	-	100	54.498	ENSFALG00000000543	PABPC4	90	56.930	Ficedula_albicollis
ENSFDAG00000010581	-	100	50.767	ENSFHEG00000007548	pabpc4	89	52.621	Fundulus_heteroclitus
ENSFDAG00000010581	-	99	49.914	ENSGMOG00000019025	pabpc4	89	51.695	Gadus_morhua
ENSFDAG00000010581	-	100	55.536	ENSGALG00000003800	PABPC4	90	58.422	Gallus_gallus
ENSFDAG00000010581	-	99	50.862	ENSGAFG00000018195	pabpc4	91	61.957	Gambusia_affinis
ENSFDAG00000010581	-	100	49.744	ENSGACG00000007179	pabpc4	90	50.936	Gasterosteus_aculeatus
ENSFDAG00000010581	-	100	54.844	ENSGAGG00000001888	PABPC4	90	57.569	Gopherus_agassizii
ENSFDAG00000010581	-	100	63.361	ENSGGOG00000004002	PABPC4	90	67.284	Gorilla_gorilla
ENSFDAG00000010581	-	99	50.000	ENSHBUG00000020206	pabpc4	88	52.229	Haplochromis_burtoni
ENSFDAG00000010581	-	100	63.697	ENSHGLG00000011162	PABPC4	90	67.901	Heterocephalus_glaber_female
ENSFDAG00000010581	-	100	63.212	ENSHGLG00100001580	PABPC4	90	67.447	Heterocephalus_glaber_male
ENSFDAG00000010581	-	99	49.135	ENSHCOG00000012694	pabpc4	88	50.746	Hippocampus_comes
ENSFDAG00000010581	-	98	48.810	ENSIPUG00000016620	pabpc4	89	51.271	Ictalurus_punctatus
ENSFDAG00000010581	-	100	63.040	ENSSTOG00000010416	PABPC4	90	67.660	Ictidomys_tridecemlineatus
ENSFDAG00000010581	-	100	63.462	ENSJJAG00000007781	Pabpc4	90	66.667	Jaculus_jaculus
ENSFDAG00000010581	-	99	48.810	ENSKMAG00000013597	pabpc4	89	51.688	Kryptolebias_marmoratus
ENSFDAG00000010581	-	99	50.000	ENSLBEG00000013654	pabpc4	88	52.017	Labrus_bergylta
ENSFDAG00000010581	-	100	53.608	ENSLACG00000011907	PABPC4	90	55.814	Latimeria_chalumnae
ENSFDAG00000010581	-	99	51.618	ENSLOCG00000001877	pabpc4	89	54.184	Lepisosteus_oculatus
ENSFDAG00000010581	-	100	63.025	ENSLAFG00000000151	PABPC4	90	67.078	Loxodonta_africana
ENSFDAG00000010581	-	100	63.361	ENSMFAG00000041481	PABPC4	90	67.490	Macaca_fascicularis
ENSFDAG00000010581	-	100	63.361	ENSMMUG00000007497	PABPC4	90	67.490	Macaca_mulatta
ENSFDAG00000010581	-	100	63.361	ENSMNEG00000043054	PABPC4	90	67.490	Macaca_nemestrina
ENSFDAG00000010581	-	100	63.361	ENSMLEG00000040716	PABPC4	95	66.935	Mandrillus_leucophaeus
ENSFDAG00000010581	-	99	49.396	ENSMAMG00000010025	pabpc4	89	51.695	Mastacembelus_armatus
ENSFDAG00000010581	-	99	49.828	ENSMZEG00005006141	pabpc4	88	52.017	Maylandia_zebra
ENSFDAG00000010581	-	100	54.855	ENSMGAG00000005408	PABPC4	99	57.531	Meleagris_gallopavo
ENSFDAG00000010581	-	87	64.800	ENSMICG00000016633	-	96	81.624	Microcebus_murinus
ENSFDAG00000010581	-	100	53.541	ENSMICG00000036729	-	98	70.645	Microcebus_murinus
ENSFDAG00000010581	-	99	62.309	ENSMOCG00000006763	Pabpc4	89	66.667	Microtus_ochrogaster
ENSFDAG00000010581	-	99	48.951	ENSMMOG00000002363	pabpc4	67	49.574	Mola_mola
ENSFDAG00000010581	-	98	55.651	ENSMODG00000017657	-	90	58.932	Monodelphis_domestica
ENSFDAG00000010581	-	99	49.570	ENSMALG00000011017	pabpc4	89	51.368	Monopterus_albus
ENSFDAG00000010581	-	99	53.310	MGP_CAROLIEiJ_G0024864	-	99	55.085	Mus_caroli
ENSFDAG00000010581	-	100	62.353	MGP_CAROLIEiJ_G0026435	-	90	66.255	Mus_caroli
ENSFDAG00000010581	-	100	62.353	ENSMUSG00000011257	Pabpc4	90	66.461	Mus_musculus
ENSFDAG00000010581	-	100	62.185	MGP_PahariEiJ_G0028765	Pabpc4	91	66.049	Mus_pahari
ENSFDAG00000010581	-	100	66.667	MGP_SPRETEiJ_G0027415	Pabpc4	92	66.667	Mus_spretus
ENSFDAG00000010581	-	100	63.025	ENSMPUG00000014414	-	90	67.078	Mustela_putorius_furo
ENSFDAG00000010581	-	94	37.313	ENSMPUG00000006836	-	88	36.916	Mustela_putorius_furo
ENSFDAG00000010581	-	100	59.170	ENSMLUG00000012068	PABPC4	89	62.260	Myotis_lucifugus
ENSFDAG00000010581	-	100	62.349	ENSNGAG00000018292	Pabpc4	90	66.383	Nannospalax_galili
ENSFDAG00000010581	-	55	66.837	ENSNBRG00000010047	-	84	66.837	Neolamprologus_brichardi
ENSFDAG00000010581	-	100	62.867	ENSNLEG00000011928	PABPC4	90	67.021	Nomascus_leucogenys
ENSFDAG00000010581	-	69	62.745	ENSOPRG00000011984	PABPC4	66	69.231	Ochotona_princeps
ENSFDAG00000010581	-	100	63.300	ENSODEG00000006592	-	90	67.423	Octodon_degus
ENSFDAG00000010581	-	93	60.960	ENSODEG00000017434	-	88	78.723	Octodon_degus
ENSFDAG00000010581	-	99	50.172	ENSONIG00000008176	pabpc4	88	52.442	Oreochromis_niloticus
ENSFDAG00000010581	-	100	55.190	ENSOANG00000010001	PABPC4	90	58.209	Ornithorhynchus_anatinus
ENSFDAG00000010581	-	95	63.233	ENSOCUG00000000562	PABPC4	79	67.841	Oryctolagus_cuniculus
ENSFDAG00000010581	-	99	49.914	ENSORLG00000017479	pabpc4	89	51.477	Oryzias_latipes
ENSFDAG00000010581	-	99	49.914	ENSORLG00020018644	pabpc4	81	61.538	Oryzias_latipes_hni
ENSFDAG00000010581	-	99	49.914	ENSORLG00015015042	pabpc4	89	51.477	Oryzias_latipes_hsok
ENSFDAG00000010581	-	99	50.432	ENSOMEG00000014410	pabpc4	89	52.321	Oryzias_melastigma
ENSFDAG00000010581	-	100	62.371	ENSOGAG00000004067	PABPC4	90	67.019	Otolemur_garnettii
ENSFDAG00000010581	-	100	62.857	ENSOARG00000020060	PABPC4	90	66.872	Ovis_aries
ENSFDAG00000010581	-	100	63.361	ENSPPAG00000043625	PABPC4	90	67.284	Pan_paniscus
ENSFDAG00000010581	-	100	63.025	ENSPPRG00000024727	PABPC4	90	67.078	Panthera_pardus
ENSFDAG00000010581	-	100	63.025	ENSPTIG00000005829	PABPC4	90	67.078	Panthera_tigris_altaica
ENSFDAG00000010581	-	100	63.361	ENSPTRG00000000573	PABPC4	90	67.284	Pan_troglodytes
ENSFDAG00000010581	-	100	63.193	ENSPANG00000009484	PABPC4	97	65.613	Papio_anubis
ENSFDAG00000010581	-	99	51.546	ENSPKIG00000025356	pabpc4	89	53.700	Paramormyrops_kingsleyae
ENSFDAG00000010581	-	100	55.363	ENSPSIG00000016892	PABPC4	90	58.209	Pelodiscus_sinensis
ENSFDAG00000010581	-	99	49.310	ENSPMGG00000009073	pabpc4	66	50.851	Periophthalmus_magnuspinnatus
ENSFDAG00000010581	-	99	61.616	ENSPEMG00000023569	-	90	65.361	Peromyscus_maniculatus_bairdii
ENSFDAG00000010581	-	99	61.239	ENSPEMG00000024193	-	89	61.239	Peromyscus_maniculatus_bairdii
ENSFDAG00000010581	-	87	43.715	ENSPMAG00000002836	pabpc4	87	46.287	Petromyzon_marinus
ENSFDAG00000010581	-	89	45.182	ENSPMAG00000007885	pabpc4	99	45.756	Petromyzon_marinus
ENSFDAG00000010581	-	98	54.889	ENSPCIG00000020674	PABPC4	92	65.556	Phascolarctos_cinereus
ENSFDAG00000010581	-	100	50.512	ENSPFOG00000002682	pabpc4	89	52.830	Poecilia_formosa
ENSFDAG00000010581	-	100	50.767	ENSPLAG00000010112	pabpc4	89	53.138	Poecilia_latipinna
ENSFDAG00000010581	-	99	50.607	ENSPMEG00000019739	pabpc4	89	53.040	Poecilia_mexicana
ENSFDAG00000010581	-	99	50.775	ENSPREG00000001589	pabpc4	95	52.654	Poecilia_reticulata
ENSFDAG00000010581	-	100	63.361	ENSPPYG00000001506	PABPC4	90	67.284	Pongo_abelii
ENSFDAG00000010581	-	100	59.160	ENSPCAG00000003341	PABPC4	90	62.346	Procavia_capensis
ENSFDAG00000010581	-	99	58.541	ENSPCOG00000025882	-	83	76.496	Propithecus_coquereli
ENSFDAG00000010581	-	100	62.919	ENSPCOG00000023725	-	90	67.556	Propithecus_coquereli
ENSFDAG00000010581	-	100	62.963	ENSPVAG00000002187	PABPC4	99	67.010	Pteropus_vampyrus
ENSFDAG00000010581	-	99	50.000	ENSPNYG00000006134	pabpc4	88	52.229	Pundamilia_nyererei
ENSFDAG00000010581	-	99	50.950	ENSPNAG00000024355	pabpc4	88	53.191	Pygocentrus_nattereri
ENSFDAG00000010581	-	100	61.005	ENSRNOG00000028592	AABR07035074.1	90	65.032	Rattus_norvegicus
ENSFDAG00000010581	-	100	62.176	ENSRNOG00000015642	Pabpc4	90	66.170	Rattus_norvegicus
ENSFDAG00000010581	-	100	63.361	ENSRBIG00000039761	PABPC4	90	67.490	Rhinopithecus_bieti
ENSFDAG00000010581	-	100	63.361	ENSRROG00000033355	PABPC4	90	67.490	Rhinopithecus_roxellana
ENSFDAG00000010581	-	100	62.963	ENSSBOG00000026193	PABPC4	90	66.804	Saimiri_boliviensis_boliviensis
ENSFDAG00000010581	-	98	54.717	ENSSHAG00000018139	PABPC4	90	58.422	Sarcophilus_harrisii
ENSFDAG00000010581	-	99	52.234	ENSSFOG00015023514	pabpc4	92	53.911	Scleropages_formosus
ENSFDAG00000010581	-	99	49.063	ENSSMAG00000009007	pabpc4	88	51.168	Scophthalmus_maximus
ENSFDAG00000010581	-	99	49.396	ENSSDUG00000012683	pabpc4	89	51.163	Seriola_dumerili
ENSFDAG00000010581	-	99	49.396	ENSSLDG00000013025	pabpc4	89	51.163	Seriola_lalandi_dorsalis
ENSFDAG00000010581	-	100	63.193	ENSSARG00000000310	PABPC4	94	66.872	Sorex_araneus
ENSFDAG00000010581	-	100	54.844	ENSSPUG00000003204	PABPC4	90	57.783	Sphenodon_punctatus
ENSFDAG00000010581	-	99	50.086	ENSSPAG00000009252	pabpc4	88	62.593	Stegastes_partitus
ENSFDAG00000010581	-	99	40.832	ENSSSCG00000036170	-	87	52.838	Sus_scrofa
ENSFDAG00000010581	-	100	63.361	ENSSSCG00000003660	-	86	80.851	Sus_scrofa
ENSFDAG00000010581	-	100	55.259	ENSTGUG00000001266	PABPC4	90	57.582	Taeniopygia_guttata
ENSFDAG00000010581	-	99	49.060	ENSTRUG00000005907	pabpc4	89	50.840	Takifugu_rubripes
ENSFDAG00000010581	-	99	46.021	ENSTNIG00000016902	pabpc4	79	59.504	Tetraodon_nigroviridis
ENSFDAG00000010581	-	100	57.432	ENSTBEG00000009035	PABPC4	99	57.432	Tupaia_belangeri
ENSFDAG00000010581	-	100	65.045	ENSTTRG00000014340	PABPC4	99	65.045	Tursiops_truncatus
ENSFDAG00000010581	-	100	62.689	ENSUAMG00000000303	PABPC4	90	66.667	Ursus_americanus
ENSFDAG00000010581	-	100	62.689	ENSUMAG00000019585	PABPC4	99	66.667	Ursus_maritimus
ENSFDAG00000010581	-	70	75.000	ENSVPAG00000010041	PABPC4	54	75.000	Vicugna_pacos
ENSFDAG00000010581	-	100	62.857	ENSVVUG00000005215	PABPC4	90	66.872	Vulpes_vulpes
ENSFDAG00000010581	-	96	50.091	ENSXETG00000010946	pabpc4	86	52.361	Xenopus_tropicalis
ENSFDAG00000010581	-	99	51.664	ENSXCOG00000013190	pabpc4	96	58.163	Xiphophorus_couchianus
ENSFDAG00000010581	-	99	50.947	ENSXMAG00000019007	pabpc4	94	52.866	Xiphophorus_maculatus