EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000010852 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 1751 bases
Position: chrKN121508.1:286863-288613
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000000667	zf-C2H2	PF00096.26	2e-16	1	2
ENSFDAP00000000667	zf-C2H2	PF00096.26	2e-16	2	2
ENSFDAP00000000667	zf-met	PF12874.7	2.2e-06	1	2
ENSFDAP00000000667	zf-met	PF12874.7	2.2e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000014756	-	516	-	ENSFDAP00000000667	171 (aa)	-	-
ENSFDAT00000014758	-	240	-	ENSFDAP00000000663	79 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000010852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000010852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000010852	-	54	40.698	ENSFDAG00000006075	-	100	40.698
ENSFDAG00000010852	-	54	36.047	ENSFDAG00000008733	SCRT1	59	36.047
ENSFDAG00000010852	-	91	38.372	ENSFDAG00000010005	ZFP64	54	37.500
ENSFDAG00000010852	-	91	39.535	ENSFDAG00000005609	-	52	39.535
ENSFDAG00000010852	-	90	35.354	ENSFDAG00000008687	-	92	35.354
ENSFDAG00000010852	-	91	43.529	ENSFDAG00000015590	ZNF235	56	43.529
ENSFDAG00000010852	-	90	39.394	ENSFDAG00000009594	-	76	39.394
ENSFDAG00000010852	-	90	38.776	ENSFDAG00000020159	ZNF319	63	38.776
ENSFDAG00000010852	-	92	41.304	ENSFDAG00000010369	-	77	41.304
ENSFDAG00000010852	-	94	41.860	ENSFDAG00000021361	PRDM5	73	41.860
ENSFDAG00000010852	-	72	36.585	ENSFDAG00000019296	-	79	36.585
ENSFDAG00000010852	-	90	39.604	ENSFDAG00000015190	-	71	39.604
ENSFDAG00000010852	-	92	40.000	ENSFDAG00000020138	-	56	40.000
ENSFDAG00000010852	-	68	41.176	ENSFDAG00000008549	ZNF2	56	41.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000010852	-	100	74.408	ENSG00000103495	MAZ	71	98.507	Homo_sapiens
ENSFDAG00000010852	-	80	62.500	ENSANAG00000037536	-	100	60.326	Aotus_nancymaae
ENSFDAG00000010852	-	100	74.408	ENSCAFG00000016964	MAZ	50	52.679	Canis_familiaris
ENSFDAG00000010852	-	100	73.934	ENSCSAG00000006110	MAZ	78	73.934	Chlorocebus_sabaeus
ENSFDAG00000010852	-	100	73.934	ENSCANG00000035162	MAZ	80	73.934	Colobus_angolensis_palliatus
ENSFDAG00000010852	-	100	73.934	ENSCGRG00000014850	-	100	73.934	Cricetulus_griseus_crigri
ENSFDAG00000010852	-	94	53.234	ENSDARG00000063555	si:ch211-166g5.4	76	53.234	Danio_rerio
ENSFDAG00000010852	-	99	49.327	ENSELUG00000022514	si:ch211-166g5.4	79	54.967	Esox_lucius
ENSFDAG00000010852	-	93	52.764	ENSFHEG00000000918	MAZ	84	52.764	Fundulus_heteroclitus
ENSFDAG00000010852	-	88	57.616	ENSGACG00000014840	maza	84	50.704	Gasterosteus_aculeatus
ENSFDAG00000010852	-	91	63.871	ENSGAGG00000008124	MAZ	79	64.251	Gopherus_agassizii
ENSFDAG00000010852	-	100	63.333	ENSHGLG00000011024	-	77	62.857	Heterocephalus_glaber_female
ENSFDAG00000010852	-	100	74.882	ENSHGLG00000018743	-	80	59.821	Heterocephalus_glaber_female
ENSFDAG00000010852	-	100	55.607	ENSHGLG00100017872	-	87	55.607	Heterocephalus_glaber_male
ENSFDAG00000010852	-	100	73.934	ENSSTOG00000027842	MAZ	80	73.934	Ictidomys_tridecemlineatus
ENSFDAG00000010852	-	100	74.408	ENSJJAG00000020922	-	80	74.408	Jaculus_jaculus
ENSFDAG00000010852	-	99	58.962	ENSLACG00000010161	MAZ	51	61.929	Latimeria_chalumnae
ENSFDAG00000010852	-	100	73.934	ENSMFAG00000040127	MAZ	80	73.934	Macaca_fascicularis
ENSFDAG00000010852	-	100	74.882	ENSMNEG00000037329	MAZ	80	73.934	Macaca_nemestrina
ENSFDAG00000010852	-	91	64.516	ENSMLEG00000036147	-	71	97.015	Mandrillus_leucophaeus
ENSFDAG00000010852	-	99	52.133	ENSMAMG00000018743	-	72	52.133	Mastacembelus_armatus
ENSFDAG00000010852	-	100	74.408	ENSODEG00000014451	MAZ	80	74.408	Octodon_degus
ENSFDAG00000010852	-	91	63.871	ENSOANG00000004112	-	66	63.871	Ornithorhynchus_anatinus
ENSFDAG00000010852	-	100	73.460	ENSOARG00000005520	MAZ	65	58.929	Ovis_aries
ENSFDAG00000010852	-	89	72.021	ENSPPAG00000041571	-	76	56.422	Pan_paniscus
ENSFDAG00000010852	-	100	79.592	ENSPPRG00000011596	-	79	80.612	Panthera_pardus
ENSFDAG00000010852	-	100	73.934	ENSPANG00000016381	-	80	73.934	Papio_anubis
ENSFDAG00000010852	-	99	51.675	ENSPKIG00000018202	-	76	49.763	Paramormyrops_kingsleyae
ENSFDAG00000010852	-	100	67.476	ENSPEMG00000008318	-	100	66.505	Peromyscus_maniculatus_bairdii
ENSFDAG00000010852	-	99	45.000	ENSPLAG00000017219	si:ch211-166g5.4	81	48.869	Poecilia_latipinna
ENSFDAG00000010852	-	99	45.000	ENSPMEG00000017552	si:ch211-166g5.4	81	48.869	Poecilia_mexicana
ENSFDAG00000010852	-	99	49.550	ENSPNAG00000004042	si:ch211-166g5.4	82	50.000	Pygocentrus_nattereri
ENSFDAG00000010852	-	100	73.934	ENSRBIG00000001823	MAZ	80	73.934	Rhinopithecus_bieti
ENSFDAG00000010852	-	100	73.934	ENSRROG00000026952	MAZ	80	73.934	Rhinopithecus_roxellana
ENSFDAG00000010852	-	100	73.934	ENSSBOG00000020791	-	80	73.934	Saimiri_boliviensis_boliviensis
ENSFDAG00000010852	-	88	54.450	ENSSFOG00015021699	si:ch211-166g5.4	57	52.604	Scleropages_formosus
ENSFDAG00000010852	-	100	74.408	ENSTTRG00000005420	MAZ	54	58.482	Tursiops_truncatus
ENSFDAG00000010852	-	100	74.408	ENSUAMG00000004622	MAZ	80	74.408	Ursus_americanus
ENSFDAG00000010852	-	100	74.408	ENSVVUG00000026097	MAZ	80	74.408	Vulpes_vulpes