EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000010899 (Gene tree)
Gene ID: 104870762
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 25928 bases
Position: chrKN122816.1:4430882-4456809
Accession: 104870762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000000726	Nop52	PF05997.12	1.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000014813	RRP1B-201	5148	XM_010636521	ENSFDAP00000000726	720 (aa)	XP_010634823	-

Gene Model

Click here to download ENSFDAG00000010899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000010899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000010899	RRP1B	54	42.424	ENSFDAG00000013728	RRP1	67	45.886

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000010899	RRP1B	96	62.927	ENSG00000160208	RRP1B	96	62.791	Homo_sapiens
ENSFDAG00000010899	RRP1B	69	76.984	ENSAMEG00000011401	RRP1B	69	76.984	Ailuropoda_melanoleuca
ENSFDAG00000010899	RRP1B	57	48.611	ENSAOCG00000017894	-	89	51.351	Amphiprion_ocellaris
ENSFDAG00000010899	RRP1B	67	46.218	ENSATEG00000005045	-	53	47.059	Anabas_testudineus
ENSFDAG00000010899	RRP1B	94	42.041	ENSAPLG00000004310	RRP1B	100	42.276	Anas_platyrhynchos
ENSFDAG00000010899	RRP1B	96	62.517	ENSANAG00000034889	RRP1B	96	62.517	Aotus_nancymaae
ENSFDAG00000010899	RRP1B	96	56.250	ENSBTAG00000017418	RRP1B	96	56.944	Bos_taurus
ENSFDAG00000010899	RRP1B	96	60.739	ENSCJAG00000017077	RRP1B	96	60.739	Callithrix_jacchus
ENSFDAG00000010899	RRP1B	94	61.441	ENSCAFG00000010621	RRP1B	99	61.582	Canis_familiaris
ENSFDAG00000010899	RRP1B	96	60.674	ENSCAFG00020018901	RRP1B	96	60.815	Canis_lupus_dingo
ENSFDAG00000010899	RRP1B	96	58.357	ENSCHIG00000021519	RRP1B	96	58.357	Capra_hircus
ENSFDAG00000010899	RRP1B	96	70.000	ENSCPOG00000002396	RRP1B	100	70.404	Cavia_porcellus
ENSFDAG00000010899	RRP1B	96	61.612	ENSCCAG00000029384	RRP1B	96	61.612	Cebus_capucinus
ENSFDAG00000010899	RRP1B	53	44.089	ENSCCAG00000029828	RRP1	67	47.112	Cebus_capucinus
ENSFDAG00000010899	RRP1B	96	62.466	ENSCATG00000017423	RRP1B	96	62.192	Cercocebus_atys
ENSFDAG00000010899	RRP1B	96	72.517	ENSCLAG00000005622	RRP1B	96	72.517	Chinchilla_lanigera
ENSFDAG00000010899	RRP1B	96	62.603	ENSCSAG00000007961	RRP1B	96	62.329	Chlorocebus_sabaeus
ENSFDAG00000010899	RRP1B	96	46.477	ENSCPBG00000010310	RRP1B	99	46.566	Chrysemys_picta_bellii
ENSFDAG00000010899	RRP1B	96	62.466	ENSCANG00000040952	RRP1B	96	62.192	Colobus_angolensis_palliatus
ENSFDAG00000010899	RRP1B	53	43.112	ENSCGRG00001011920	Rrp1	69	46.795	Cricetulus_griseus_chok1gshd
ENSFDAG00000010899	RRP1B	96	59.141	ENSCGRG00001023882	-	96	58.807	Cricetulus_griseus_chok1gshd
ENSFDAG00000010899	RRP1B	96	59.254	ENSCGRG00001010889	-	96	58.978	Cricetulus_griseus_chok1gshd
ENSFDAG00000010899	RRP1B	94	60.056	ENSCGRG00000001553	Rrp1b	97	59.775	Cricetulus_griseus_crigri
ENSFDAG00000010899	RRP1B	53	43.112	ENSCGRG00000008915	Rrp1	69	46.795	Cricetulus_griseus_crigri
ENSFDAG00000010899	RRP1B	56	48.913	ENSCSEG00000020711	-	70	48.913	Cynoglossus_semilaevis
ENSFDAG00000010899	RRP1B	96	57.084	ENSDNOG00000032774	RRP1B	96	57.280	Dasypus_novemcinctus
ENSFDAG00000010899	RRP1B	58	43.095	ENSDNOG00000019880	RRP1	72	48.936	Dasypus_novemcinctus
ENSFDAG00000010899	RRP1B	93	55.745	ENSDORG00000005496	Rrp1b	100	57.082	Dipodomys_ordii
ENSFDAG00000010899	RRP1B	87	81.176	ENSETEG00000019489	RRP1B	87	81.176	Echinops_telfairi
ENSFDAG00000010899	RRP1B	52	43.832	ENSEASG00005001673	RRP1	70	46.341	Equus_asinus_asinus
ENSFDAG00000010899	RRP1B	96	61.801	ENSEASG00005001687	RRP1B	96	61.898	Equus_asinus_asinus
ENSFDAG00000010899	RRP1B	55	41.205	ENSECAG00000015703	RRP1	69	47.419	Equus_caballus
ENSFDAG00000010899	RRP1B	96	61.918	ENSECAG00000018018	RRP1B	96	61.937	Equus_caballus
ENSFDAG00000010899	RRP1B	63	50.806	ENSELUG00000015885	-	80	41.667	Esox_lucius
ENSFDAG00000010899	RRP1B	96	59.059	ENSFCAG00000010272	RRP1B	96	60.364	Felis_catus
ENSFDAG00000010899	RRP1B	92	41.370	ENSFALG00000002024	RRP1B	100	42.441	Ficedula_albicollis
ENSFDAG00000010899	RRP1B	68	48.421	ENSFHEG00000016314	-	68	38.217	Fundulus_heteroclitus
ENSFDAG00000010899	RRP1B	60	47.273	ENSGMOG00000001953	-	63	47.273	Gadus_morhua
ENSFDAG00000010899	RRP1B	96	41.848	ENSGALG00000035696	RRP1B	95	41.901	Gallus_gallus
ENSFDAG00000010899	RRP1B	94	31.837	ENSGACG00000001438	rrp1	94	31.293	Gasterosteus_aculeatus
ENSFDAG00000010899	RRP1B	96	62.740	ENSGGOG00000012069	RRP1B	96	62.603	Gorilla_gorilla
ENSFDAG00000010899	RRP1B	96	78.501	ENSHGLG00000004968	RRP1B	96	78.501	Heterocephalus_glaber_female
ENSFDAG00000010899	RRP1B	93	82.102	ENSHGLG00100002232	RRP1B	99	73.140	Heterocephalus_glaber_male
ENSFDAG00000010899	RRP1B	65	43.448	ENSHCOG00000018388	-	58	43.056	Hippocampus_comes
ENSFDAG00000010899	RRP1B	56	45.545	ENSIPUG00000000673	-	61	40.810	Ictalurus_punctatus
ENSFDAG00000010899	RRP1B	52	43.979	ENSSTOG00000011116	RRP1	85	44.241	Ictidomys_tridecemlineatus
ENSFDAG00000010899	RRP1B	96	63.928	ENSSTOG00000011790	RRP1B	92	63.776	Ictidomys_tridecemlineatus
ENSFDAG00000010899	RRP1B	96	55.632	ENSJJAG00000021279	Rrp1b	96	55.220	Jaculus_jaculus
ENSFDAG00000010899	RRP1B	59	47.656	ENSKMAG00000005539	rrp1	68	46.774	Kryptolebias_marmoratus
ENSFDAG00000010899	RRP1B	95	38.017	ENSLACG00000017332	-	99	36.531	Latimeria_chalumnae
ENSFDAG00000010899	RRP1B	88	56.932	ENSLAFG00000000766	RRP1B	99	56.399	Loxodonta_africana
ENSFDAG00000010899	RRP1B	96	62.380	ENSMFAG00000039152	RRP1B	96	62.107	Macaca_fascicularis
ENSFDAG00000010899	RRP1B	96	60.055	ENSMMUG00000000104	RRP1B	96	59.781	Macaca_mulatta
ENSFDAG00000010899	RRP1B	96	62.244	ENSMNEG00000034269	RRP1B	96	61.970	Macaca_nemestrina
ENSFDAG00000010899	RRP1B	97	62.399	ENSMLEG00000040044	RRP1B	99	63.459	Mandrillus_leucophaeus
ENSFDAG00000010899	RRP1B	96	58.078	ENSMAUG00000021508	Rrp1b	96	57.741	Mesocricetus_auratus
ENSFDAG00000010899	RRP1B	51	34.646	ENSMAUG00000017653	Rrp1	66	37.217	Mesocricetus_auratus
ENSFDAG00000010899	RRP1B	96	65.084	ENSMICG00000004686	RRP1B	96	65.503	Microcebus_murinus
ENSFDAG00000010899	RRP1B	96	56.944	ENSMOCG00000001117	Rrp1b	96	57.004	Microtus_ochrogaster
ENSFDAG00000010899	RRP1B	51	37.204	ENSMOCG00000015687	Rrp1	72	41.667	Microtus_ochrogaster
ENSFDAG00000010899	RRP1B	96	54.843	ENSMODG00000021033	RRP1B	96	55.450	Monodelphis_domestica
ENSFDAG00000010899	RRP1B	96	57.024	MGP_CAROLIEiJ_G0021376	Rrp1b	96	55.633	Mus_caroli
ENSFDAG00000010899	RRP1B	96	55.494	ENSMUSG00000058392	Rrp1b	96	55.972	Mus_musculus
ENSFDAG00000010899	RRP1B	96	57.799	MGP_PahariEiJ_G0023695	Rrp1b	96	56.685	Mus_pahari
ENSFDAG00000010899	RRP1B	96	56.727	MGP_SPRETEiJ_G0022290	Rrp1b	96	55.479	Mus_spretus
ENSFDAG00000010899	RRP1B	83	56.230	ENSMPUG00000009810	RRP1B	99	56.709	Mustela_putorius_furo
ENSFDAG00000010899	RRP1B	96	60.027	ENSMLUG00000007738	RRP1B	96	59.560	Myotis_lucifugus
ENSFDAG00000010899	RRP1B	96	59.078	ENSNGAG00000021073	Rrp1b	96	58.799	Nannospalax_galili
ENSFDAG00000010899	RRP1B	96	61.219	ENSNLEG00000001490	RRP1B	96	61.080	Nomascus_leucogenys
ENSFDAG00000010899	RRP1B	60	74.444	ENSMEUG00000003226	-	59	75.556	Notamacropus_eugenii
ENSFDAG00000010899	RRP1B	96	67.719	ENSODEG00000013177	RRP1B	96	67.192	Octodon_degus
ENSFDAG00000010899	RRP1B	95	47.778	ENSOANG00000006470	RRP1B	95	48.061	Ornithorhynchus_anatinus
ENSFDAG00000010899	RRP1B	94	54.468	ENSOCUG00000025931	RRP1B	100	54.610	Oryctolagus_cuniculus
ENSFDAG00000010899	RRP1B	66	44.056	ENSORLG00020007199	-	53	48.387	Oryzias_latipes_hni
ENSFDAG00000010899	RRP1B	65	42.566	ENSORLG00015004425	-	55	44.056	Oryzias_latipes_hsok
ENSFDAG00000010899	RRP1B	55	53.086	ENSOMEG00000016910	-	51	51.111	Oryzias_melastigma
ENSFDAG00000010899	RRP1B	50	44.262	ENSOGAG00000006105	RRP1	92	41.109	Otolemur_garnettii
ENSFDAG00000010899	RRP1B	76	76.033	ENSOGAG00000009872	RRP1B	83	76.033	Otolemur_garnettii
ENSFDAG00000010899	RRP1B	94	57.932	ENSOARG00000011314	RRP1B	100	57.932	Ovis_aries
ENSFDAG00000010899	RRP1B	95	63.573	ENSPPAG00000035319	RRP1B	99	63.435	Pan_paniscus
ENSFDAG00000010899	RRP1B	96	58.149	ENSPPRG00000010356	RRP1B	96	59.580	Panthera_pardus
ENSFDAG00000010899	RRP1B	69	72.263	ENSPTIG00000016894	RRP1B	89	72.993	Panthera_tigris_altaica
ENSFDAG00000010899	RRP1B	96	62.654	ENSPTRG00000013958	RRP1B	96	62.517	Pan_troglodytes
ENSFDAG00000010899	RRP1B	96	62.877	ENSPANG00000011090	RRP1B	96	62.603	Papio_anubis
ENSFDAG00000010899	RRP1B	64	51.261	ENSPKIG00000003422	-	54	51.261	Paramormyrops_kingsleyae
ENSFDAG00000010899	RRP1B	96	44.733	ENSPSIG00000008152	RRP1B	91	45.542	Pelodiscus_sinensis
ENSFDAG00000010899	RRP1B	96	59.104	ENSPEMG00000022490	Rrp1b	96	59.580	Peromyscus_maniculatus_bairdii
ENSFDAG00000010899	RRP1B	57	43.632	ENSPCIG00000015523	-	67	52.303	Phascolarctos_cinereus
ENSFDAG00000010899	RRP1B	96	54.980	ENSPCIG00000015513	RRP1B	96	55.935	Phascolarctos_cinereus
ENSFDAG00000010899	RRP1B	71	39.833	ENSPFOG00000007424	-	63	39.634	Poecilia_formosa
ENSFDAG00000010899	RRP1B	68	43.796	ENSPMEG00000007042	-	58	43.796	Poecilia_mexicana
ENSFDAG00000010899	RRP1B	63	44.776	ENSPREG00000015673	-	55	44.776	Poecilia_reticulata
ENSFDAG00000010899	RRP1B	96	62.740	ENSPPYG00000011470	RRP1B	96	62.603	Pongo_abelii
ENSFDAG00000010899	RRP1B	85	81.053	ENSPCAG00000013723	RRP1B	91	81.053	Procavia_capensis
ENSFDAG00000010899	RRP1B	96	64.466	ENSPCOG00000017927	RRP1B	96	65.169	Propithecus_coquereli
ENSFDAG00000010899	RRP1B	96	55.571	ENSPVAG00000001436	RRP1B	96	55.433	Pteropus_vampyrus
ENSFDAG00000010899	RRP1B	94	60.653	ENSRNOG00000001194	Rrp1b	96	59.693	Rattus_norvegicus
ENSFDAG00000010899	RRP1B	96	58.767	ENSRBIG00000041689	RRP1B	96	58.493	Rhinopithecus_bieti
ENSFDAG00000010899	RRP1B	96	62.466	ENSRROG00000031499	RRP1B	96	62.192	Rhinopithecus_roxellana
ENSFDAG00000010899	RRP1B	94	61.911	ENSSBOG00000034727	RRP1B	99	61.911	Saimiri_boliviensis_boliviensis
ENSFDAG00000010899	RRP1B	96	54.980	ENSSHAG00000017789	RRP1B	96	55.722	Sarcophilus_harrisii
ENSFDAG00000010899	RRP1B	67	47.934	ENSSFOG00015003932	-	59	44.928	Scleropages_formosus
ENSFDAG00000010899	RRP1B	63	48.062	ENSSMAG00000016847	-	79	40.950	Scophthalmus_maximus
ENSFDAG00000010899	RRP1B	63	46.970	ENSSDUG00000000551	-	51	45.205	Seriola_dumerili
ENSFDAG00000010899	RRP1B	63	46.970	ENSSLDG00000002538	-	51	45.205	Seriola_lalandi_dorsalis
ENSFDAG00000010899	RRP1B	78	61.620	ENSSARG00000003108	-	79	61.268	Sorex_araneus
ENSFDAG00000010899	RRP1B	76	45.538	ENSSPUG00000002834	RRP1B	95	38.522	Sphenodon_punctatus
ENSFDAG00000010899	RRP1B	96	55.634	ENSSSCG00000021698	RRP1B	99	56.403	Sus_scrofa
ENSFDAG00000010899	RRP1B	59	44.231	ENSTNIG00000005053	rrp1	67	44.231	Tetraodon_nigroviridis
ENSFDAG00000010899	RRP1B	91	63.170	ENSTBEG00000000422	RRP1B	97	75.157	Tupaia_belangeri
ENSFDAG00000010899	RRP1B	96	56.022	ENSTTRG00000000723	RRP1B	96	56.844	Tursiops_truncatus
ENSFDAG00000010899	RRP1B	96	60.740	ENSUAMG00000026765	RRP1B	96	60.740	Ursus_americanus
ENSFDAG00000010899	RRP1B	66	76.515	ENSUMAG00000025510	RRP1B	92	75.000	Ursus_maritimus
ENSFDAG00000010899	RRP1B	94	61.072	ENSVVUG00000024509	RRP1B	99	61.213	Vulpes_vulpes
ENSFDAG00000010899	RRP1B	56	44.444	ENSXETG00000013683	rrp1b	61	44.340	Xenopus_tropicalis
ENSFDAG00000010899	RRP1B	63	50.000	ENSXMAG00000023123	-	61	45.299	Xiphophorus_maculatus