EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000010948 (Gene tree)
Gene ID: 104847711
Gene Symbol: -
Alias: -
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 69925 bases
Position: chrKN123669.1:2560405-2630329
Accession: 104847711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000000794	MMR_HSR1	PF01926.23	4.1e-05	1	1
ENSFDAP00000000795	MMR_HSR1	PF01926.23	4.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000014863	-	3473	XM_019204401	ENSFDAP00000000795	208 (aa)	XP_019059946	UPI0003339DDF
ENSFDAT00000014864	-	3473	XM_010603258	ENSFDAP00000000794	208 (aa)	XP_010601560	A0A091CWD3

Gene Model

Click here to download ENSFDAG00000010948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000010948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000010948	-	75	36.250	ENSFDAG00000020602	RHEB	85	36.250
ENSFDAG00000010948	-	82	32.000	ENSFDAG00000007662	RERG	86	32.000
ENSFDAG00000010948	-	80	45.181	ENSFDAG00000008326	RAB5B	77	45.181
ENSFDAG00000010948	-	90	33.333	ENSFDAG00000006897	RAB25	89	33.333
ENSFDAG00000010948	-	94	36.000	ENSFDAG00000008524	RAB7A	96	36.000
ENSFDAG00000010948	-	76	43.038	ENSFDAG00000017456	RAB2B	79	43.421
ENSFDAG00000010948	-	76	40.373	ENSFDAG00000016178	RAB34	62	40.373
ENSFDAG00000010948	-	95	38.049	ENSFDAG00000008571	RAB33A	86	38.049
ENSFDAG00000010948	-	94	38.384	ENSFDAG00000019505	-	96	37.755
ENSFDAG00000010948	-	75	32.278	ENSFDAG00000000107	KRAS	83	32.278
ENSFDAG00000010948	-	93	37.879	ENSFDAG00000010180	-	96	37.879
ENSFDAG00000010948	-	94	35.323	ENSFDAG00000016833	RAB33B	86	35.323
ENSFDAG00000010948	-	84	35.955	ENSFDAG00000021495	RAB11A	82	35.955
ENSFDAG00000010948	-	93	33.824	ENSFDAG00000006951	RAB9A	96	33.824
ENSFDAG00000010948	-	98	41.546	ENSFDAG00000005631	-	95	41.546
ENSFDAG00000010948	-	59	43.902	ENSFDAG00000014469	-	93	43.902
ENSFDAG00000010948	-	76	39.241	ENSFDAG00000014834	RAB23	66	39.241
ENSFDAG00000010948	-	98	39.320	ENSFDAG00000021541	RAB5C	94	39.320
ENSFDAG00000010948	-	94	35.211	ENSFDAG00000013013	RAB36	80	35.211
ENSFDAG00000010948	-	94	36.232	ENSFDAG00000007443	RAB14	95	36.232
ENSFDAG00000010948	-	100	90.865	ENSFDAG00000005525	RAB6B	100	90.865
ENSFDAG00000010948	-	79	33.140	ENSFDAG00000014776	RAB9B	84	33.140
ENSFDAG00000010948	-	92	34.500	ENSFDAG00000019872	RAB11B	89	34.500
ENSFDAG00000010948	-	81	31.176	ENSFDAG00000019759	MRAS	76	32.500
ENSFDAG00000010948	-	75	32.278	ENSFDAG00000006760	HRAS	83	32.278
ENSFDAG00000010948	-	75	32.911	ENSFDAG00000021405	NRAS	83	32.911
ENSFDAG00000010948	-	75	39.623	ENSFDAG00000014725	RAB39B	75	39.623
ENSFDAG00000010948	-	77	42.857	ENSFDAG00000014521	RAB30	79	42.857
ENSFDAG00000010948	-	95	38.693	ENSFDAG00000015285	RAB37	92	38.693

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000010948	-	100	99.038	ENSG00000175582	RAB6A	100	99.429	Homo_sapiens
ENSFDAG00000010948	-	99	89.372	ENSAPOG00000005731	rab6a	98	89.372	Acanthochromis_polyacanthus
ENSFDAG00000010948	-	100	99.519	ENSAMEG00000017285	RAB6A	82	99.519	Ailuropoda_melanoleuca
ENSFDAG00000010948	-	100	96.635	ENSACIG00000014605	rab6a	100	96.635	Amphilophus_citrinellus
ENSFDAG00000010948	-	100	95.192	ENSAOCG00000012277	-	100	95.192	Amphiprion_ocellaris
ENSFDAG00000010948	-	100	96.154	ENSATEG00000012459	-	100	96.154	Anabas_testudineus
ENSFDAG00000010948	-	99	89.372	ENSATEG00000015992	rab41	98	89.372	Anabas_testudineus
ENSFDAG00000010948	-	98	89.163	ENSACAG00000015304	-	96	88.835	Anolis_carolinensis
ENSFDAG00000010948	-	100	99.519	ENSANAG00000036364	RAB6A	100	99.519	Aotus_nancymaae
ENSFDAG00000010948	-	99	89.372	ENSACLG00000019423	rab41	98	89.372	Astatotilapia_calliptera
ENSFDAG00000010948	-	99	82.126	ENSAMXG00000033216	rab41	98	82.126	Astyanax_mexicanus
ENSFDAG00000010948	-	100	97.596	ENSAMXG00000032547	rab6a	100	97.596	Astyanax_mexicanus
ENSFDAG00000010948	-	100	99.519	ENSBTAG00000000025	RAB6A	100	99.519	Bos_taurus
ENSFDAG00000010948	-	98	76.214	WBGene00004269	rab-6.1	99	76.214	Caenorhabditis_elegans
ENSFDAG00000010948	-	100	99.519	ENSCJAG00000039039	RAB6A	100	99.519	Callithrix_jacchus
ENSFDAG00000010948	-	100	99.038	ENSCAFG00000028870	RAB6A	100	99.038	Canis_familiaris
ENSFDAG00000010948	-	100	99.519	ENSCAFG00020002206	RAB6A	100	99.519	Canis_lupus_dingo
ENSFDAG00000010948	-	100	99.519	ENSCHIG00000023957	RAB6A	100	99.519	Capra_hircus
ENSFDAG00000010948	-	100	99.038	ENSTSYG00000013951	RAB6A	100	99.038	Carlito_syrichta
ENSFDAG00000010948	-	100	99.519	ENSCATG00000012428	RAB6A	100	99.519	Cercocebus_atys
ENSFDAG00000010948	-	100	100.000	ENSCLAG00000015536	RAB6A	100	100.000	Chinchilla_lanigera
ENSFDAG00000010948	-	100	99.519	ENSCSAG00000004062	RAB6A	100	99.519	Chlorocebus_sabaeus
ENSFDAG00000010948	-	100	88.462	ENSCHOG00000000992	RAB6A	100	88.462	Choloepus_hoffmanni
ENSFDAG00000010948	-	100	98.558	ENSCPBG00000000041	RAB6A	100	98.558	Chrysemys_picta_bellii
ENSFDAG00000010948	-	98	86.957	ENSCING00000002960	-	99	86.957	Ciona_intestinalis
ENSFDAG00000010948	-	98	86.957	ENSCSAVG00000009128	-	99	86.957	Ciona_savignyi
ENSFDAG00000010948	-	100	99.519	ENSCANG00000029094	RAB6A	100	99.519	Colobus_angolensis_palliatus
ENSFDAG00000010948	-	100	99.519	ENSCGRG00001018153	Rab6a	100	99.519	Cricetulus_griseus_chok1gshd
ENSFDAG00000010948	-	99	89.855	ENSCSEG00000004941	rab41	98	89.855	Cynoglossus_semilaevis
ENSFDAG00000010948	-	99	88.889	ENSCVAG00000001618	rab41	98	88.889	Cyprinodon_variegatus
ENSFDAG00000010948	-	100	96.635	ENSCVAG00000022249	rab6a	100	96.635	Cyprinodon_variegatus
ENSFDAG00000010948	-	99	89.372	ENSDARG00000029885	rab41	98	89.372	Danio_rerio
ENSFDAG00000010948	-	100	98.077	ENSDARG00000103714	rab6a	100	98.077	Danio_rerio
ENSFDAG00000010948	-	100	99.038	ENSDNOG00000042746	RAB6A	100	99.038	Dasypus_novemcinctus
ENSFDAG00000010948	-	100	100.000	ENSDORG00000027784	Rab6a	100	100.000	Dipodomys_ordii
ENSFDAG00000010948	-	99	87.440	FBgn0015797	Rab6	99	87.440	Drosophila_melanogaster
ENSFDAG00000010948	-	100	72.596	ENSETEG00000009412	-	100	72.596	Echinops_telfairi
ENSFDAG00000010948	-	100	99.519	ENSEASG00005017944	RAB6A	100	99.519	Equus_asinus_asinus
ENSFDAG00000010948	-	100	99.519	ENSECAG00000022694	-	100	99.519	Equus_caballus
ENSFDAG00000010948	-	100	97.596	ENSELUG00000008876	rab6a	100	97.596	Esox_lucius
ENSFDAG00000010948	-	100	99.519	ENSFCAG00000023834	RAB6A	100	99.519	Felis_catus
ENSFDAG00000010948	-	100	98.558	ENSFALG00000008011	RAB6A	100	98.558	Ficedula_albicollis
ENSFDAG00000010948	-	99	89.372	ENSGMOG00000004095	rab41	98	89.372	Gadus_morhua
ENSFDAG00000010948	-	99	92.718	ENSGALG00000026278	-	98	92.718	Gallus_gallus
ENSFDAG00000010948	-	100	99.038	ENSGALG00000017320	RAB6A	100	99.038	Gallus_gallus
ENSFDAG00000010948	-	100	96.635	ENSGAFG00000006356	rab6a	100	96.635	Gambusia_affinis
ENSFDAG00000010948	-	99	88.406	ENSGAFG00000019872	rab41	98	88.406	Gambusia_affinis
ENSFDAG00000010948	-	100	96.154	ENSGACG00000020356	rab6a	100	96.154	Gasterosteus_aculeatus
ENSFDAG00000010948	-	99	89.372	ENSGACG00000017153	rab41	98	89.372	Gasterosteus_aculeatus
ENSFDAG00000010948	-	100	98.558	ENSGAGG00000021701	RAB6A	100	98.558	Gopherus_agassizii
ENSFDAG00000010948	-	100	99.038	ENSGGOG00000010610	RAB6A	100	99.038	Gorilla_gorilla
ENSFDAG00000010948	-	100	96.154	ENSHBUG00000000890	rab6a	100	96.154	Haplochromis_burtoni
ENSFDAG00000010948	-	100	100.000	ENSHGLG00000008829	-	100	100.000	Heterocephalus_glaber_female
ENSFDAG00000010948	-	100	99.038	ENSHGLG00100014550	-	100	99.038	Heterocephalus_glaber_male
ENSFDAG00000010948	-	100	94.712	ENSHCOG00000006550	-	100	94.712	Hippocampus_comes
ENSFDAG00000010948	-	99	89.372	ENSHCOG00000004404	rab41	98	89.372	Hippocampus_comes
ENSFDAG00000010948	-	99	88.889	ENSIPUG00000019382	rab41	98	88.889	Ictalurus_punctatus
ENSFDAG00000010948	-	100	95.192	ENSIPUG00000021740	rab6a	100	95.192	Ictalurus_punctatus
ENSFDAG00000010948	-	100	99.519	ENSSTOG00000023497	RAB6A	100	99.519	Ictidomys_tridecemlineatus
ENSFDAG00000010948	-	80	99.398	ENSKMAG00000013146	-	86	99.398	Kryptolebias_marmoratus
ENSFDAG00000010948	-	100	94.712	ENSLBEG00000003748	rab6a	100	94.712	Labrus_bergylta
ENSFDAG00000010948	-	100	94.712	ENSLACG00000005168	RAB6A	100	94.712	Latimeria_chalumnae
ENSFDAG00000010948	-	99	92.718	ENSLACG00000013980	rab41	98	92.718	Latimeria_chalumnae
ENSFDAG00000010948	-	99	89.855	ENSLOCG00000015191	rab41	98	89.855	Lepisosteus_oculatus
ENSFDAG00000010948	-	100	99.519	ENSMFAG00000041027	RAB6A	100	99.519	Macaca_fascicularis
ENSFDAG00000010948	-	100	99.519	ENSMNEG00000029216	RAB6A	100	99.519	Macaca_nemestrina
ENSFDAG00000010948	-	100	99.519	ENSMLEG00000038771	RAB6A	100	99.519	Mandrillus_leucophaeus
ENSFDAG00000010948	-	100	96.154	ENSMAMG00000012488	rab6a	100	96.154	Mastacembelus_armatus
ENSFDAG00000010948	-	99	88.406	ENSMAMG00000020859	rab41	98	88.406	Mastacembelus_armatus
ENSFDAG00000010948	-	100	96.154	ENSMZEG00005023181	rab6a	100	96.154	Maylandia_zebra
ENSFDAG00000010948	-	100	99.519	ENSMICG00000031565	RAB6A	100	99.519	Microcebus_murinus
ENSFDAG00000010948	-	100	99.519	ENSMOCG00000014387	Rab6a	100	99.519	Microtus_ochrogaster
ENSFDAG00000010948	-	92	90.052	ENSMMOG00000001992	rab41	87	90.052	Mola_mola
ENSFDAG00000010948	-	100	91.827	ENSMMOG00000016209	rab6a	100	91.827	Mola_mola
ENSFDAG00000010948	-	100	98.558	ENSMODG00000007600	RAB6A	100	98.558	Monodelphis_domestica
ENSFDAG00000010948	-	99	89.372	ENSMALG00000010549	rab41	98	89.372	Monopterus_albus
ENSFDAG00000010948	-	100	95.673	ENSMALG00000020364	-	100	95.673	Monopterus_albus
ENSFDAG00000010948	-	100	99.519	MGP_CAROLIEiJ_G0030051	Rab6a	100	99.519	Mus_caroli
ENSFDAG00000010948	-	100	99.519	ENSMUSG00000030704	Rab6a	100	99.519	Mus_musculus
ENSFDAG00000010948	-	100	99.519	MGP_PahariEiJ_G0013273	Rab6a	100	99.519	Mus_pahari
ENSFDAG00000010948	-	100	99.519	MGP_SPRETEiJ_G0031162	Rab6a	100	99.519	Mus_spretus
ENSFDAG00000010948	-	100	99.519	ENSMPUG00000009724	RAB6A	100	99.519	Mustela_putorius_furo
ENSFDAG00000010948	-	100	99.038	ENSNGAG00000014566	Rab6a	100	99.038	Nannospalax_galili
ENSFDAG00000010948	-	100	96.154	ENSNBRG00000016716	rab6a	100	96.154	Neolamprologus_brichardi
ENSFDAG00000010948	-	99	89.372	ENSNBRG00000022702	rab41	98	89.372	Neolamprologus_brichardi
ENSFDAG00000010948	-	100	99.519	ENSNLEG00000017098	RAB6A	100	99.519	Nomascus_leucogenys
ENSFDAG00000010948	-	100	98.558	ENSMEUG00000010026	RAB6A	100	98.558	Notamacropus_eugenii
ENSFDAG00000010948	-	91	100.000	ENSOPRG00000010355	RAB6A	100	100.000	Ochotona_princeps
ENSFDAG00000010948	-	100	100.000	ENSODEG00000005942	RAB6A	100	100.000	Octodon_degus
ENSFDAG00000010948	-	100	96.154	ENSONIG00000004394	rab6a	100	96.154	Oreochromis_niloticus
ENSFDAG00000010948	-	100	99.519	ENSOCUG00000009297	RAB6A	100	99.519	Oryctolagus_cuniculus
ENSFDAG00000010948	-	100	87.442	ENSORLG00000000937	-	100	87.442	Oryzias_latipes
ENSFDAG00000010948	-	100	95.192	ENSORLG00000026197	rab6a	100	95.192	Oryzias_latipes
ENSFDAG00000010948	-	100	95.192	ENSORLG00020001816	rab6a	100	95.192	Oryzias_latipes_hni
ENSFDAG00000010948	-	99	88.406	ENSORLG00020000604	rab41	98	88.406	Oryzias_latipes_hni
ENSFDAG00000010948	-	100	95.192	ENSORLG00015006162	rab6a	100	95.192	Oryzias_latipes_hsok
ENSFDAG00000010948	-	100	95.192	ENSOMEG00000004379	-	100	95.192	Oryzias_melastigma
ENSFDAG00000010948	-	100	98.558	ENSOGAG00000027043	RAB6A	100	98.558	Otolemur_garnettii
ENSFDAG00000010948	-	100	99.519	ENSOARG00000007994	RAB6A	100	99.519	Ovis_aries
ENSFDAG00000010948	-	100	99.038	ENSPPAG00000011436	RAB6A	100	99.038	Pan_paniscus
ENSFDAG00000010948	-	100	99.519	ENSPPRG00000009543	RAB6A	100	99.519	Panthera_pardus
ENSFDAG00000010948	-	100	99.038	ENSPTRG00000044137	RAB6A	100	99.038	Pan_troglodytes
ENSFDAG00000010948	-	100	99.519	ENSPANG00000014356	RAB6A	100	99.519	Papio_anubis
ENSFDAG00000010948	-	99	88.835	ENSPKIG00000018584	rab41	98	88.835	Paramormyrops_kingsleyae
ENSFDAG00000010948	-	100	94.712	ENSPMGG00000010067	-	100	94.712	Periophthalmus_magnuspinnatus
ENSFDAG00000010948	-	100	96.635	ENSPFOG00000019509	rab6a	100	96.635	Poecilia_formosa
ENSFDAG00000010948	-	99	89.372	ENSPLAG00000000376	rab41	98	89.372	Poecilia_latipinna
ENSFDAG00000010948	-	100	96.635	ENSPLAG00000019570	rab6a	100	96.635	Poecilia_latipinna
ENSFDAG00000010948	-	100	96.635	ENSPMEG00000003369	rab6a	100	96.635	Poecilia_mexicana
ENSFDAG00000010948	-	99	89.372	ENSPMEG00000014170	rab41	98	89.372	Poecilia_mexicana
ENSFDAG00000010948	-	100	96.635	ENSPREG00000021505	rab6a	100	96.635	Poecilia_reticulata
ENSFDAG00000010948	-	100	99.038	ENSPPYG00000003663	RAB6A	100	99.038	Pongo_abelii
ENSFDAG00000010948	-	90	100.000	ENSPCAG00000006752	RAB6A	100	100.000	Procavia_capensis
ENSFDAG00000010948	-	100	99.519	ENSPCOG00000021991	RAB6A	100	99.519	Propithecus_coquereli
ENSFDAG00000010948	-	100	99.519	ENSPVAG00000017342	RAB6A	100	99.519	Pteropus_vampyrus
ENSFDAG00000010948	-	100	96.154	ENSPNYG00000020556	rab6a	100	96.154	Pundamilia_nyererei
ENSFDAG00000010948	-	99	89.372	ENSPNYG00000013288	rab41	98	89.372	Pundamilia_nyererei
ENSFDAG00000010948	-	99	90.338	ENSPNAG00000021737	rab41	98	90.338	Pygocentrus_nattereri
ENSFDAG00000010948	-	100	99.519	ENSRNOG00000018176	Rab6a	100	99.519	Rattus_norvegicus
ENSFDAG00000010948	-	100	99.519	ENSRBIG00000030390	RAB6A	100	99.519	Rhinopithecus_bieti
ENSFDAG00000010948	-	100	99.519	ENSRROG00000042103	RAB6A	100	99.519	Rhinopithecus_roxellana
ENSFDAG00000010948	-	100	84.135	ENSSBOG00000028389	RAB6A	100	84.135	Saimiri_boliviensis_boliviensis
ENSFDAG00000010948	-	100	97.596	ENSSFOG00015002077	rab6a	100	97.596	Scleropages_formosus
ENSFDAG00000010948	-	98	89.163	ENSSFOG00015004941	rab41	96	88.835	Scleropages_formosus
ENSFDAG00000010948	-	99	89.372	ENSSMAG00000015774	rab41	98	89.372	Scophthalmus_maximus
ENSFDAG00000010948	-	100	91.346	ENSSMAG00000017205	-	100	91.346	Scophthalmus_maximus
ENSFDAG00000010948	-	100	96.635	ENSSDUG00000013496	-	100	96.635	Seriola_dumerili
ENSFDAG00000010948	-	100	96.635	ENSSLDG00000015289	-	100	96.635	Seriola_lalandi_dorsalis
ENSFDAG00000010948	-	99	89.372	ENSSLDG00000022282	rab41	98	89.372	Seriola_lalandi_dorsalis
ENSFDAG00000010948	-	99	92.233	ENSSPUG00000001533	-	98	92.233	Sphenodon_punctatus
ENSFDAG00000010948	-	100	98.077	ENSSPUG00000017301	RAB6A	100	98.077	Sphenodon_punctatus
ENSFDAG00000010948	-	100	93.750	ENSSPAG00000001067	-	100	93.750	Stegastes_partitus
ENSFDAG00000010948	-	99	89.372	ENSSPAG00000006001	rab41	98	89.372	Stegastes_partitus
ENSFDAG00000010948	-	100	99.519	ENSSSCG00000014828	RAB6A	100	99.519	Sus_scrofa
ENSFDAG00000010948	-	100	98.558	ENSTGUG00000013470	RAB6A	100	98.558	Taeniopygia_guttata
ENSFDAG00000010948	-	99	89.372	ENSTRUG00000009223	rab41	98	89.372	Takifugu_rubripes
ENSFDAG00000010948	-	100	95.673	ENSTRUG00000023252	rab6a	100	95.673	Takifugu_rubripes
ENSFDAG00000010948	-	100	99.038	ENSTTRG00000005374	RAB6A	100	99.038	Tursiops_truncatus
ENSFDAG00000010948	-	100	94.712	ENSUMAG00000010248	RAB6A	100	94.712	Ursus_maritimus
ENSFDAG00000010948	-	100	99.519	ENSVVUG00000024550	RAB6A	100	99.519	Vulpes_vulpes
ENSFDAG00000010948	-	91	97.354	ENSXETG00000023200	rab6a	100	97.354	Xenopus_tropicalis
ENSFDAG00000010948	-	100	79.808	ENSXETG00000031363	-	100	79.808	Xenopus_tropicalis
ENSFDAG00000010948	-	100	96.635	ENSXCOG00000006259	rab6a	100	96.635	Xiphophorus_couchianus
ENSFDAG00000010948	-	100	96.635	ENSXMAG00000011903	rab6a	100	96.635	Xiphophorus_maculatus