EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000011085 (Gene tree)
Gene ID: 104860490
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 8825 bases
Position: chrKN121968.1:3639054-3647878
Accession: 104860490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000000978	MBD	PF01429.19	4.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000015017	MBD1-201	1686	XM_010621698	ENSFDAP00000000978	561 (aa)	XP_010620000	-

Gene Model

Click here to download ENSFDAG00000011085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000011085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000011085	MBD1	96	80.182	ENSG00000141644	MBD1	99	81.462	Homo_sapiens
ENSFDAG00000011085	MBD1	96	70.813	ENSAMEG00000000238	MBD1	95	71.132	Ailuropoda_melanoleuca
ENSFDAG00000011085	MBD1	95	79.717	ENSANAG00000036253	MBD1	91	79.545	Aotus_nancymaae
ENSFDAG00000011085	MBD1	86	81.579	ENSBTAG00000003801	MBD1	99	69.745	Bos_taurus
ENSFDAG00000011085	MBD1	97	78.078	ENSCJAG00000004959	MBD1	91	78.082	Callithrix_jacchus
ENSFDAG00000011085	MBD1	96	69.649	ENSCAFG00000018928	MBD1	95	70.288	Canis_familiaris
ENSFDAG00000011085	MBD1	97	69.097	ENSCAFG00020024272	MBD1	98	69.731	Canis_lupus_dingo
ENSFDAG00000011085	MBD1	96	69.856	ENSCHIG00000021134	MBD1	99	69.856	Capra_hircus
ENSFDAG00000011085	MBD1	96	77.540	ENSTSYG00000000509	MBD1	99	79.144	Carlito_syrichta
ENSFDAG00000011085	MBD1	97	75.177	ENSCAPG00000015782	MBD1	98	75.758	Cavia_aperea
ENSFDAG00000011085	MBD1	97	69.552	ENSCPOG00000001671	MBD1	90	90.868	Cavia_porcellus
ENSFDAG00000011085	MBD1	96	76.712	ENSCCAG00000034600	MBD1	99	78.207	Cebus_capucinus
ENSFDAG00000011085	MBD1	96	80.480	ENSCATG00000029959	MBD1	99	80.492	Cercocebus_atys
ENSFDAG00000011085	MBD1	96	90.411	ENSCLAG00000007457	MBD1	81	90.411	Chinchilla_lanigera
ENSFDAG00000011085	MBD1	96	80.480	ENSCSAG00000018070	MBD1	90	80.180	Chlorocebus_sabaeus
ENSFDAG00000011085	MBD1	96	80.180	ENSCANG00000033425	MBD1	99	79.818	Colobus_angolensis_palliatus
ENSFDAG00000011085	MBD1	97	51.364	ENSCGRG00001014843	Mbd1	98	50.977	Cricetulus_griseus_chok1gshd
ENSFDAG00000011085	MBD1	97	66.486	ENSCGRG00000014135	Mbd1	98	65.523	Cricetulus_griseus_crigri
ENSFDAG00000011085	MBD1	97	77.841	ENSDNOG00000015998	MBD1	90	77.841	Dasypus_novemcinctus
ENSFDAG00000011085	MBD1	97	73.466	ENSDORG00000013917	Mbd1	98	73.466	Dipodomys_ordii
ENSFDAG00000011085	MBD1	94	78.598	ENSEASG00005003857	MBD1	89	78.967	Equus_asinus_asinus
ENSFDAG00000011085	MBD1	80	86.782	ENSECAG00000011497	MBD1	73	80.453	Equus_caballus
ENSFDAG00000011085	MBD1	96	79.396	ENSFCAG00000015730	MBD1	99	79.751	Felis_catus
ENSFDAG00000011085	MBD1	96	80.180	ENSGGOG00000016966	MBD1	99	79.818	Gorilla_gorilla
ENSFDAG00000011085	MBD1	95	78.317	ENSHGLG00000008740	MBD1	90	93.868	Heterocephalus_glaber_female
ENSFDAG00000011085	MBD1	95	85.587	ENSHGLG00100005198	MBD1	98	86.477	Heterocephalus_glaber_male
ENSFDAG00000011085	MBD1	97	67.576	ENSSTOG00000007780	MBD1	99	66.190	Ictidomys_tridecemlineatus
ENSFDAG00000011085	MBD1	97	74.864	ENSJJAG00000022859	Mbd1	98	75.000	Jaculus_jaculus
ENSFDAG00000011085	MBD1	97	61.759	ENSLAFG00000031328	MBD1	98	61.759	Loxodonta_africana
ENSFDAG00000011085	MBD1	96	80.480	ENSMFAG00000026335	MBD1	99	80.492	Macaca_fascicularis
ENSFDAG00000011085	MBD1	95	80.660	ENSMMUG00000009050	MBD1	91	80.682	Macaca_mulatta
ENSFDAG00000011085	MBD1	96	80.480	ENSMNEG00000038822	MBD1	99	80.492	Macaca_nemestrina
ENSFDAG00000011085	MBD1	96	80.480	ENSMLEG00000043121	MBD1	99	80.492	Mandrillus_leucophaeus
ENSFDAG00000011085	MBD1	96	79.545	ENSMICG00000006414	MBD1	99	73.611	Microcebus_murinus
ENSFDAG00000011085	MBD1	50	68.531	ENSMOCG00000011976	-	94	72.180	Microtus_ochrogaster
ENSFDAG00000011085	MBD1	98	62.098	ENSMUSG00000024561	Mbd1	98	61.591	Mus_musculus
ENSFDAG00000011085	MBD1	98	62.329	MGP_PahariEiJ_G0019128	Mbd1	96	63.732	Mus_pahari
ENSFDAG00000011085	MBD1	98	59.643	MGP_SPRETEiJ_G0023304	Mbd1	98	59.314	Mus_spretus
ENSFDAG00000011085	MBD1	96	70.016	ENSMPUG00000008843	MBD1	95	70.335	Mustela_putorius_furo
ENSFDAG00000011085	MBD1	96	79.261	ENSMLUG00000008286	MBD1	95	69.391	Myotis_lucifugus
ENSFDAG00000011085	MBD1	97	72.840	ENSNGAG00000011412	Mbd1	98	69.665	Nannospalax_galili
ENSFDAG00000011085	MBD1	96	80.480	ENSNLEG00000011661	-	99	79.636	Nomascus_leucogenys
ENSFDAG00000011085	MBD1	94	72.089	ENSNLEG00000032711	-	89	71.062	Nomascus_leucogenys
ENSFDAG00000011085	MBD1	96	73.795	ENSOPRG00000007647	MBD1	90	73.795	Ochotona_princeps
ENSFDAG00000011085	MBD1	97	88.022	ENSODEG00000018451	MBD1	98	87.545	Octodon_degus
ENSFDAG00000011085	MBD1	96	66.720	ENSOCUG00000006554	MBD1	91	80.455	Oryctolagus_cuniculus
ENSFDAG00000011085	MBD1	96	68.760	ENSOGAG00000003784	MBD1	96	69.388	Otolemur_garnettii
ENSFDAG00000011085	MBD1	96	69.316	ENSOARG00000004218	MBD1	94	69.316	Ovis_aries
ENSFDAG00000011085	MBD1	96	80.480	ENSPPAG00000038886	MBD1	99	80.492	Pan_paniscus
ENSFDAG00000011085	MBD1	96	79.574	ENSPPRG00000021387	MBD1	99	79.929	Panthera_pardus
ENSFDAG00000011085	MBD1	96	79.751	ENSPTIG00000021231	MBD1	99	80.107	Panthera_tigris_altaica
ENSFDAG00000011085	MBD1	96	80.480	ENSPTRG00000010021	MBD1	99	80.492	Pan_troglodytes
ENSFDAG00000011085	MBD1	95	80.660	ENSPANG00000010867	MBD1	91	80.398	Papio_anubis
ENSFDAG00000011085	MBD1	97	64.174	ENSPEMG00000022630	Mbd1	98	63.763	Peromyscus_maniculatus_bairdii
ENSFDAG00000011085	MBD1	67	59.160	ENSPCIG00000027937	-	62	57.252	Phascolarctos_cinereus
ENSFDAG00000011085	MBD1	96	80.781	ENSPPYG00000009158	MBD1	82	80.480	Pongo_abelii
ENSFDAG00000011085	MBD1	95	67.606	ENSPCAG00000001648	MBD1	98	60.601	Procavia_capensis
ENSFDAG00000011085	MBD1	95	83.178	ENSPCOG00000012450	MBD1	99	80.762	Propithecus_coquereli
ENSFDAG00000011085	MBD1	97	52.249	ENSRNOG00000024104	Mbd1	98	57.293	Rattus_norvegicus
ENSFDAG00000011085	MBD1	95	79.717	ENSRBIG00000041294	MBD1	99	74.153	Rhinopithecus_bieti
ENSFDAG00000011085	MBD1	96	80.180	ENSRROG00000032517	MBD1	99	79.636	Rhinopithecus_roxellana
ENSFDAG00000011085	MBD1	95	80.660	ENSSBOG00000027169	MBD1	99	79.965	Saimiri_boliviensis_boliviensis
ENSFDAG00000011085	MBD1	73	36.306	ENSSHAG00000003661	-	56	49.242	Sarcophilus_harrisii
ENSFDAG00000011085	MBD1	96	77.177	ENSSSCG00000004516	MBD1	86	83.013	Sus_scrofa
ENSFDAG00000011085	MBD1	67	78.774	ENSTBEG00000012651	-	63	78.774	Tupaia_belangeri
ENSFDAG00000011085	MBD1	96	76.577	ENSTTRG00000015523	MBD1	90	78.679	Tursiops_truncatus
ENSFDAG00000011085	MBD1	89	82.792	ENSUAMG00000004752	MBD1	86	82.792	Ursus_americanus
ENSFDAG00000011085	MBD1	98	69.375	ENSUMAG00000002947	MBD1	99	70.181	Ursus_maritimus