EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000011133 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 1937 bases
Position: chrKN123428.1:1814805-1816741
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000001045	ResIII	PF04851.15	5.5e-05	1	1
ENSFDAP00000001045	DEAD	PF00270.29	2.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000015078	-	1716	-	ENSFDAP00000001045	571 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000011133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000011133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000011133	-	63	30.287	ENSFDAG00000010141	DDX59	60	30.287
ENSFDAG00000011133	-	100	90.285	ENSFDAG00000008340	-	100	90.285

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000011133	-	100	81.364	ENSG00000278053	DDX52	100	81.364	Homo_sapiens
ENSFDAG00000011133	-	99	54.106	ENSAPOG00000008759	ddx52	88	54.589	Acanthochromis_polyacanthus
ENSFDAG00000011133	-	100	81.167	ENSAMEG00000013159	DDX52	100	81.531	Ailuropoda_melanoleuca
ENSFDAG00000011133	-	91	56.607	ENSACIG00000002843	ddx52	99	58.036	Amphilophus_citrinellus
ENSFDAG00000011133	-	99	53.457	ENSAOCG00000007983	ddx52	91	53.626	Amphiprion_ocellaris
ENSFDAG00000011133	-	99	52.857	ENSAOCG00000000356	-	88	54.180	Amphiprion_ocellaris
ENSFDAG00000011133	-	99	52.951	ENSAPEG00000023456	ddx52	88	53.920	Amphiprion_percula
ENSFDAG00000011133	-	99	54.677	ENSATEG00000021525	ddx52	90	54.839	Anabas_testudineus
ENSFDAG00000011133	-	81	67.629	ENSACAG00000006395	DDX52	93	67.629	Anolis_carolinensis
ENSFDAG00000011133	-	100	81.032	ENSANAG00000028587	DDX52	100	81.032	Aotus_nancymaae
ENSFDAG00000011133	-	99	52.836	ENSACLG00000021447	ddx52	97	54.472	Astatotilapia_calliptera
ENSFDAG00000011133	-	95	57.240	ENSAMXG00000024377	ddx52	97	56.623	Astyanax_mexicanus
ENSFDAG00000011133	-	100	79.466	ENSBTAG00000010313	DDX52	100	79.466	Bos_taurus
ENSFDAG00000011133	-	75	37.234	WBGene00011032	R05D11.4	78	37.006	Caenorhabditis_elegans
ENSFDAG00000011133	-	100	80.532	ENSCJAG00000015190	DDX52	100	80.532	Callithrix_jacchus
ENSFDAG00000011133	-	100	81.864	ENSCAFG00000013554	-	100	81.864	Canis_familiaris
ENSFDAG00000011133	-	100	81.623	ENSCAFG00000018145	-	100	81.623	Canis_familiaris
ENSFDAG00000011133	-	96	82.639	ENSCAFG00020003753	DDX52	97	82.639	Canis_lupus_dingo
ENSFDAG00000011133	-	100	79.867	ENSCHIG00000006275	DDX52	100	80.895	Capra_hircus
ENSFDAG00000011133	-	100	81.531	ENSTSYG00000002996	DDX52	100	81.531	Carlito_syrichta
ENSFDAG00000011133	-	92	68.488	ENSCAPG00000010436	DDX52	100	68.488	Cavia_aperea
ENSFDAG00000011133	-	100	84.422	ENSCPOG00000001232	DDX52	100	84.422	Cavia_porcellus
ENSFDAG00000011133	-	100	80.865	ENSCCAG00000023213	DDX52	100	80.865	Cebus_capucinus
ENSFDAG00000011133	-	100	81.531	ENSCATG00000041437	DDX52	100	81.531	Cercocebus_atys
ENSFDAG00000011133	-	100	84.859	ENSCLAG00000016292	DDX52	100	84.859	Chinchilla_lanigera
ENSFDAG00000011133	-	100	81.531	ENSCSAG00000006122	DDX52	100	81.531	Chlorocebus_sabaeus
ENSFDAG00000011133	-	72	76.042	ENSCHOG00000007413	DDX52	73	76.042	Choloepus_hoffmanni
ENSFDAG00000011133	-	95	66.887	ENSCPBG00000009806	DDX52	98	65.760	Chrysemys_picta_bellii
ENSFDAG00000011133	-	77	46.377	ENSCING00000016218	-	100	46.377	Ciona_intestinalis
ENSFDAG00000011133	-	63	50.129	ENSCSAVG00000003835	-	98	49.749	Ciona_savignyi
ENSFDAG00000011133	-	100	81.333	ENSCANG00000035140	DDX52	100	81.333	Colobus_angolensis_palliatus
ENSFDAG00000011133	-	100	78.939	ENSCGRG00001020695	Ddx52	100	79.768	Cricetulus_griseus_chok1gshd
ENSFDAG00000011133	-	100	78.773	ENSCGRG00000008830	Ddx52	100	79.602	Cricetulus_griseus_crigri
ENSFDAG00000011133	-	98	53.008	ENSCSEG00000010008	ddx52	91	53.722	Cynoglossus_semilaevis
ENSFDAG00000011133	-	95	57.019	ENSCVAG00000005302	ddx52	99	57.022	Cyprinodon_variegatus
ENSFDAG00000011133	-	95	56.326	ENSDARG00000100505	ddx52	98	56.833	Danio_rerio
ENSFDAG00000011133	-	100	80.399	ENSDNOG00000047454	DDX52	100	80.399	Dasypus_novemcinctus
ENSFDAG00000011133	-	100	81.333	ENSDORG00000004276	Ddx52	100	81.333	Dipodomys_ordii
ENSFDAG00000011133	-	99	72.203	ENSETEG00000016042	DDX52	99	72.203	Echinops_telfairi
ENSFDAG00000011133	-	62	37.056	ENSEBUG00000010838	-	91	37.626	Eptatretus_burgeri
ENSFDAG00000011133	-	99	80.737	ENSEASG00005011275	DDX52	92	80.737	Equus_asinus_asinus
ENSFDAG00000011133	-	100	81.333	ENSECAG00000012286	DDX52	100	81.333	Equus_caballus
ENSFDAG00000011133	-	70	80.929	ENSEEUG00000001153	DDX52	68	82.396	Erinaceus_europaeus
ENSFDAG00000011133	-	91	55.851	ENSELUG00000018002	ddx52	99	56.584	Esox_lucius
ENSFDAG00000011133	-	100	82.137	ENSFCAG00000010573	DDX52	100	82.137	Felis_catus
ENSFDAG00000011133	-	98	65.093	ENSFALG00000005155	DDX52	98	65.289	Ficedula_albicollis
ENSFDAG00000011133	-	98	54.682	ENSFHEG00000017239	ddx52	91	55.092	Fundulus_heteroclitus
ENSFDAG00000011133	-	96	55.226	ENSGMOG00000014879	ddx52	100	55.923	Gadus_morhua
ENSFDAG00000011133	-	97	64.966	ENSGALG00000005489	DDX52	99	63.756	Gallus_gallus
ENSFDAG00000011133	-	99	54.575	ENSGAFG00000000702	ddx52	94	55.116	Gambusia_affinis
ENSFDAG00000011133	-	96	56.207	ENSGACG00000020624	ddx52	99	61.359	Gasterosteus_aculeatus
ENSFDAG00000011133	-	95	65.174	ENSGAGG00000007234	DDX52	96	64.600	Gopherus_agassizii
ENSFDAG00000011133	-	100	81.697	ENSGGOG00000028224	DDX52	100	81.697	Gorilla_gorilla
ENSFDAG00000011133	-	81	60.489	ENSHBUG00000015638	ddx52	91	53.871	Haplochromis_burtoni
ENSFDAG00000011133	-	96	85.640	ENSHGLG00000006235	-	98	85.640	Heterocephalus_glaber_female
ENSFDAG00000011133	-	92	69.581	ENSHGLG00000019205	-	96	69.581	Heterocephalus_glaber_female
ENSFDAG00000011133	-	73	87.045	ENSHGLG00100013765	-	82	87.045	Heterocephalus_glaber_male
ENSFDAG00000011133	-	92	69.581	ENSHGLG00100018699	-	97	69.581	Heterocephalus_glaber_male
ENSFDAG00000011133	-	99	53.299	ENSHCOG00000007966	ddx52	99	53.299	Hippocampus_comes
ENSFDAG00000011133	-	80	62.708	ENSIPUG00000008623	ddx52	98	56.436	Ictalurus_punctatus
ENSFDAG00000011133	-	58	88.321	ENSSTOG00000002550	DDX52	94	88.321	Ictidomys_tridecemlineatus
ENSFDAG00000011133	-	100	79.436	ENSJJAG00000021877	Ddx52	100	79.436	Jaculus_jaculus
ENSFDAG00000011133	-	99	55.754	ENSKMAG00000022270	ddx52	98	66.584	Kryptolebias_marmoratus
ENSFDAG00000011133	-	99	52.724	ENSLBEG00000015403	ddx52	92	53.365	Labrus_bergylta
ENSFDAG00000011133	-	95	62.457	ENSLACG00000012514	DDX52	96	61.983	Latimeria_chalumnae
ENSFDAG00000011133	-	77	66.667	ENSLOCG00000005928	ddx52	96	64.583	Lepisosteus_oculatus
ENSFDAG00000011133	-	96	73.793	ENSLAFG00000002635	DDX52	99	84.833	Loxodonta_africana
ENSFDAG00000011133	-	100	81.531	ENSMFAG00000000640	DDX52	100	81.531	Macaca_fascicularis
ENSFDAG00000011133	-	100	81.198	ENSMMUG00000002980	DDX52	100	81.198	Macaca_mulatta
ENSFDAG00000011133	-	100	81.364	ENSMNEG00000043658	DDX52	100	81.364	Macaca_nemestrina
ENSFDAG00000011133	-	100	81.198	ENSMLEG00000017518	DDX52	100	81.198	Mandrillus_leucophaeus
ENSFDAG00000011133	-	98	54.770	ENSMAMG00000019719	ddx52	89	54.770	Mastacembelus_armatus
ENSFDAG00000011133	-	82	60.729	ENSMZEG00005019044	ddx52	90	54.093	Maylandia_zebra
ENSFDAG00000011133	-	89	66.667	ENSMGAG00000008091	DDX52	95	66.306	Meleagris_gallopavo
ENSFDAG00000011133	-	100	74.129	ENSMAUG00000021084	Ddx52	100	74.129	Mesocricetus_auratus
ENSFDAG00000011133	-	96	76.736	ENSMICG00000004290	-	99	76.736	Microcebus_murinus
ENSFDAG00000011133	-	100	79.104	ENSMOCG00000009654	Ddx52	100	79.602	Microtus_ochrogaster
ENSFDAG00000011133	-	98	56.261	ENSMMOG00000018825	ddx52	90	56.261	Mola_mola
ENSFDAG00000011133	-	98	71.953	ENSMODG00000002493	DDX52	98	73.000	Monodelphis_domestica
ENSFDAG00000011133	-	93	55.135	ENSMALG00000007621	ddx52	88	55.142	Monopterus_albus
ENSFDAG00000011133	-	100	78.571	MGP_CAROLIEiJ_G0016888	Ddx52	100	78.571	Mus_caroli
ENSFDAG00000011133	-	100	78.275	ENSMUSG00000020677	Ddx52	100	78.405	Mus_musculus
ENSFDAG00000011133	-	100	76.936	MGP_PahariEiJ_G0018018	Ddx52	100	78.441	Mus_pahari
ENSFDAG00000011133	-	100	77.243	MGP_SPRETEiJ_G0017733	Ddx52	100	78.405	Mus_spretus
ENSFDAG00000011133	-	100	82.196	ENSMPUG00000015007	DDX52	100	82.196	Mustela_putorius_furo
ENSFDAG00000011133	-	79	84.599	ENSMLUG00000024480	-	97	85.443	Myotis_lucifugus
ENSFDAG00000011133	-	100	79.900	ENSMLUG00000007167	-	100	81.063	Myotis_lucifugus
ENSFDAG00000011133	-	100	80.833	ENSNGAG00000020686	Ddx52	100	80.833	Nannospalax_galili
ENSFDAG00000011133	-	77	62.069	ENSNBRG00000007750	ddx52	92	58.915	Neolamprologus_brichardi
ENSFDAG00000011133	-	100	81.833	ENSNLEG00000002826	DDX52	100	81.833	Nomascus_leucogenys
ENSFDAG00000011133	-	64	79.028	ENSMEUG00000011234	DDX52	98	79.028	Notamacropus_eugenii
ENSFDAG00000011133	-	100	74.833	ENSOPRG00000003899	DDX52	100	75.500	Ochotona_princeps
ENSFDAG00000011133	-	96	79.655	ENSODEG00000012814	-	100	79.655	Octodon_degus
ENSFDAG00000011133	-	99	76.988	ENSODEG00000002857	-	99	76.988	Octodon_degus
ENSFDAG00000011133	-	99	53.485	ENSONIG00000004869	ddx52	98	54.693	Oreochromis_niloticus
ENSFDAG00000011133	-	95	69.100	ENSOANG00000007133	DDX52	98	69.270	Ornithorhynchus_anatinus
ENSFDAG00000011133	-	100	81.063	ENSOCUG00000014532	DDX52	100	81.063	Oryctolagus_cuniculus
ENSFDAG00000011133	-	95	54.762	ENSORLG00000005241	ddx52	92	53.454	Oryzias_latipes
ENSFDAG00000011133	-	95	54.592	ENSORLG00015015546	ddx52	88	55.017	Oryzias_latipes_hsok
ENSFDAG00000011133	-	97	53.613	ENSOMEG00000017602	ddx52	90	54.545	Oryzias_melastigma
ENSFDAG00000011133	-	97	77.196	ENSOGAG00000000868	DDX52	99	79.245	Otolemur_garnettii
ENSFDAG00000011133	-	100	79.373	ENSOARG00000002998	DDX52	100	80.532	Ovis_aries
ENSFDAG00000011133	-	100	81.271	ENSPPAG00000028453	DDX52	100	81.271	Pan_paniscus
ENSFDAG00000011133	-	100	81.040	ENSPPRG00000009742	DDX52	100	81.040	Panthera_pardus
ENSFDAG00000011133	-	100	80.872	ENSPTIG00000013697	DDX52	100	80.872	Panthera_tigris_altaica
ENSFDAG00000011133	-	100	81.198	ENSPTRG00000009058	DDX52	100	81.198	Pan_troglodytes
ENSFDAG00000011133	-	100	81.198	ENSPANG00000022101	DDX52	100	81.198	Papio_anubis
ENSFDAG00000011133	-	97	57.288	ENSPKIG00000013058	ddx52	98	57.288	Paramormyrops_kingsleyae
ENSFDAG00000011133	-	95	66.839	ENSPSIG00000010226	DDX52	99	66.110	Pelodiscus_sinensis
ENSFDAG00000011133	-	77	60.691	ENSPMGG00000005458	ddx52	93	60.043	Periophthalmus_magnuspinnatus
ENSFDAG00000011133	-	100	78.869	ENSPEMG00000003263	Ddx52	100	78.869	Peromyscus_maniculatus_bairdii
ENSFDAG00000011133	-	98	71.849	ENSPCIG00000017730	DDX52	92	72.059	Phascolarctos_cinereus
ENSFDAG00000011133	-	95	55.786	ENSPFOG00000018378	ddx52	91	54.908	Poecilia_formosa
ENSFDAG00000011133	-	95	55.959	ENSPLAG00000008368	ddx52	91	55.075	Poecilia_latipinna
ENSFDAG00000011133	-	95	55.782	ENSPMEG00000002359	ddx52	91	54.918	Poecilia_mexicana
ENSFDAG00000011133	-	95	56.131	ENSPREG00000016874	ddx52	91	55.075	Poecilia_reticulata
ENSFDAG00000011133	-	100	80.897	ENSPPYG00000008221	DDX52	100	80.897	Pongo_abelii
ENSFDAG00000011133	-	98	70.847	ENSPCAG00000005814	DDX52	99	71.186	Procavia_capensis
ENSFDAG00000011133	-	100	80.333	ENSPVAG00000010462	DDX52	100	80.333	Pteropus_vampyrus
ENSFDAG00000011133	-	100	54.714	ENSPNYG00000020730	ddx52	99	54.714	Pundamilia_nyererei
ENSFDAG00000011133	-	95	56.293	ENSPNAG00000014707	ddx52	96	56.167	Pygocentrus_nattereri
ENSFDAG00000011133	-	100	78.607	ENSRNOG00000002612	Ddx52	100	78.607	Rattus_norvegicus
ENSFDAG00000011133	-	100	74.210	ENSRBIG00000032462	DDX52	100	74.210	Rhinopithecus_bieti
ENSFDAG00000011133	-	100	75.042	ENSRROG00000034760	DDX52	100	75.042	Rhinopithecus_roxellana
ENSFDAG00000011133	-	96	35.085	YGL171W	-	96	34.746	Saccharomyces_cerevisiae
ENSFDAG00000011133	-	100	80.467	ENSSBOG00000035787	DDX52	100	80.467	Saimiri_boliviensis_boliviensis
ENSFDAG00000011133	-	99	73.388	ENSSHAG00000013962	DDX52	97	73.388	Sarcophilus_harrisii
ENSFDAG00000011133	-	93	58.845	ENSSFOG00015005055	ddx52	99	58.131	Scleropages_formosus
ENSFDAG00000011133	-	95	54.622	ENSSMAG00000009788	ddx52	91	55.791	Scophthalmus_maximus
ENSFDAG00000011133	-	95	55.085	ENSSDUG00000004022	ddx52	93	54.295	Seriola_dumerili
ENSFDAG00000011133	-	98	54.333	ENSSLDG00000016999	ddx52	93	55.330	Seriola_lalandi_dorsalis
ENSFDAG00000011133	-	83	61.979	ENSSARG00000000371	-	74	77.206	Sorex_araneus
ENSFDAG00000011133	-	95	65.340	ENSSPUG00000000720	DDX52	98	64.388	Sphenodon_punctatus
ENSFDAG00000011133	-	81	59.325	ENSSPAG00000014211	ddx52	86	55.810	Stegastes_partitus
ENSFDAG00000011133	-	100	80.532	ENSSSCG00000021275	DDX52	100	80.532	Sus_scrofa
ENSFDAG00000011133	-	97	65.136	ENSTGUG00000008303	-	100	65.136	Taeniopygia_guttata
ENSFDAG00000011133	-	96	55.705	ENSTRUG00000017071	ddx52	86	56.303	Takifugu_rubripes
ENSFDAG00000011133	-	96	57.560	ENSTNIG00000009990	ddx52	99	56.951	Tetraodon_nigroviridis
ENSFDAG00000011133	-	84	77.972	ENSTBEG00000005982	DDX52	75	77.972	Tupaia_belangeri
ENSFDAG00000011133	-	100	81.333	ENSTTRG00000008917	DDX52	100	81.333	Tursiops_truncatus
ENSFDAG00000011133	-	100	81.000	ENSVPAG00000001979	DDX52	100	81.000	Vicugna_pacos
ENSFDAG00000011133	-	100	82.363	ENSVVUG00000020209	DDX52	100	82.363	Vulpes_vulpes
ENSFDAG00000011133	-	96	63.682	ENSXETG00000025903	ddx52	100	63.851	Xenopus_tropicalis
ENSFDAG00000011133	-	95	55.877	ENSXMAG00000010805	ddx52	92	55.008	Xiphophorus_maculatus