EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000011199 (Gene tree)
Gene ID: 104864148
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 94096 bases
Position: chrKN122211.1:1744233-1838328
Accession: 104864148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000001113	ResIII	PF04851.15	1.7e-05	1	1
ENSFDAP00000001113	rRNA_proc-arch	PF13234.6	1.3e-87	1	1
ENSFDAP00000001113	DEAD	PF00270.29	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000015135	MTREX-201	3111	XM_010626944	ENSFDAP00000001113	1036 (aa)	XP_010625246	-

Gene Model

Click here to download ENSFDAG00000011199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000011199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000011199	MTREX	88	35.959	ENSFDAG00000009438	SKIV2L	76	35.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000011199	MTREX	100	97.889	ENSG00000039123	MTREX	100	97.889	Homo_sapiens
ENSFDAG00000011199	MTREX	100	82.857	ENSAPOG00000007814	mtrex	100	82.857	Acanthochromis_polyacanthus
ENSFDAG00000011199	MTREX	100	97.124	ENSAMEG00000013856	MTREX	100	97.124	Ailuropoda_melanoleuca
ENSFDAG00000011199	MTREX	100	81.801	ENSACIG00000015117	mtrex	100	81.801	Amphilophus_citrinellus
ENSFDAG00000011199	MTREX	100	83.015	ENSAOCG00000011884	mtrex	100	83.015	Amphiprion_ocellaris
ENSFDAG00000011199	MTREX	100	82.920	ENSAPEG00000019384	mtrex	100	82.920	Amphiprion_percula
ENSFDAG00000011199	MTREX	100	83.508	ENSATEG00000015117	mtrex	100	83.508	Anabas_testudineus
ENSFDAG00000011199	MTREX	95	92.401	ENSAPLG00000009694	MTREX	99	92.401	Anas_platyrhynchos
ENSFDAG00000011199	MTREX	100	90.865	ENSACAG00000015200	MTREX	96	90.865	Anolis_carolinensis
ENSFDAG00000011199	MTREX	100	97.793	ENSANAG00000023095	MTREX	100	97.793	Aotus_nancymaae
ENSFDAG00000011199	MTREX	100	82.218	ENSACLG00000001921	mtrex	100	82.314	Astatotilapia_calliptera
ENSFDAG00000011199	MTREX	95	83.400	ENSAMXG00000018751	mtrex	99	83.501	Astyanax_mexicanus
ENSFDAG00000011199	MTREX	100	97.404	ENSBTAG00000010518	MTREX	100	97.404	Bos_taurus
ENSFDAG00000011199	MTREX	91	53.312	WBGene00012342	mtr-4	94	52.887	Caenorhabditis_elegans
ENSFDAG00000011199	MTREX	100	96.660	ENSCJAG00000001773	MTREX	100	96.660	Callithrix_jacchus
ENSFDAG00000011199	MTREX	100	97.313	ENSCAFG00000006818	MTREX	100	97.313	Canis_familiaris
ENSFDAG00000011199	MTREX	100	97.313	ENSCAFG00020024352	MTREX	100	97.313	Canis_lupus_dingo
ENSFDAG00000011199	MTREX	100	97.121	ENSCHIG00000024413	MTREX	100	97.121	Capra_hircus
ENSFDAG00000011199	MTREX	94	97.846	ENSTSYG00000007389	MTREX	100	97.846	Carlito_syrichta
ENSFDAG00000011199	MTREX	96	73.647	ENSCAPG00000008696	MTREX	100	73.647	Cavia_aperea
ENSFDAG00000011199	MTREX	100	97.793	ENSCPOG00000009797	MTREX	100	97.793	Cavia_porcellus
ENSFDAG00000011199	MTREX	100	97.697	ENSCCAG00000014177	MTREX	100	97.697	Cebus_capucinus
ENSFDAG00000011199	MTREX	100	98.081	ENSCATG00000042153	MTREX	100	98.081	Cercocebus_atys
ENSFDAG00000011199	MTREX	100	97.793	ENSCLAG00000006622	MTREX	100	97.793	Chinchilla_lanigera
ENSFDAG00000011199	MTREX	100	93.206	ENSCSAG00000016445	MTREX	100	93.493	Chlorocebus_sabaeus
ENSFDAG00000011199	MTREX	69	93.056	ENSCHOG00000010936	-	70	93.056	Choloepus_hoffmanni
ENSFDAG00000011199	MTREX	100	91.739	ENSCPBG00000026551	MTREX	94	91.931	Chrysemys_picta_bellii
ENSFDAG00000011199	MTREX	99	66.379	ENSCING00000003239	-	99	66.475	Ciona_intestinalis
ENSFDAG00000011199	MTREX	99	65.201	ENSCSAVG00000009304	-	100	69.785	Ciona_savignyi
ENSFDAG00000011199	MTREX	100	97.985	ENSCANG00000035770	MTREX	100	97.985	Colobus_angolensis_palliatus
ENSFDAG00000011199	MTREX	100	96.641	ENSCGRG00001024680	Mtrex	100	96.641	Cricetulus_griseus_chok1gshd
ENSFDAG00000011199	MTREX	100	96.641	ENSCGRG00000000307	Mtrex	100	96.641	Cricetulus_griseus_crigri
ENSFDAG00000011199	MTREX	100	81.853	ENSCSEG00000018621	mtrex	98	81.853	Cynoglossus_semilaevis
ENSFDAG00000011199	MTREX	100	83.541	ENSCVAG00000004556	mtrex	100	83.413	Cyprinodon_variegatus
ENSFDAG00000011199	MTREX	100	84.785	ENSDARG00000013457	mtrex	100	84.785	Danio_rerio
ENSFDAG00000011199	MTREX	100	95.889	ENSDNOG00000015375	MTREX	100	95.889	Dasypus_novemcinctus
ENSFDAG00000011199	MTREX	100	97.025	ENSDORG00000006782	Mtrex	100	97.025	Dipodomys_ordii
ENSFDAG00000011199	MTREX	99	62.216	FBgn0001986	Mtr4	99	62.311	Drosophila_melanogaster
ENSFDAG00000011199	MTREX	90	79.724	ENSETEG00000000727	MTREX	90	79.724	Echinops_telfairi
ENSFDAG00000011199	MTREX	99	74.206	ENSEBUG00000012869	mtrex	99	74.206	Eptatretus_burgeri
ENSFDAG00000011199	MTREX	100	96.833	ENSEASG00005013270	MTREX	100	96.833	Equus_asinus_asinus
ENSFDAG00000011199	MTREX	100	96.929	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSFDAG00000011199	MTREX	98	87.707	ENSEEUG00000000527	MTREX	100	87.707	Erinaceus_europaeus
ENSFDAG00000011199	MTREX	98	84.399	ENSELUG00000004898	mtrex	100	89.076	Esox_lucius
ENSFDAG00000011199	MTREX	100	97.217	ENSFCAG00000010575	MTREX	100	97.217	Felis_catus
ENSFDAG00000011199	MTREX	100	89.519	ENSFALG00000010850	MTREX	100	89.625	Ficedula_albicollis
ENSFDAG00000011199	MTREX	100	83.508	ENSFHEG00000023014	mtrex	100	82.775	Fundulus_heteroclitus
ENSFDAG00000011199	MTREX	100	79.159	ENSGMOG00000014702	mtrex	100	79.541	Gadus_morhua
ENSFDAG00000011199	MTREX	100	90.481	ENSGALG00000014709	MTREX	86	90.481	Gallus_gallus
ENSFDAG00000011199	MTREX	100	83.429	ENSGAFG00000012425	mtrex	100	83.429	Gambusia_affinis
ENSFDAG00000011199	MTREX	100	79.274	ENSGACG00000016260	mtrex	96	84.891	Gasterosteus_aculeatus
ENSFDAG00000011199	MTREX	100	91.547	ENSGAGG00000020036	MTREX	100	91.739	Gopherus_agassizii
ENSFDAG00000011199	MTREX	100	97.985	ENSGGOG00000001867	MTREX	100	97.985	Gorilla_gorilla
ENSFDAG00000011199	MTREX	100	82.218	ENSHBUG00000006229	mtrex	100	82.314	Haplochromis_burtoni
ENSFDAG00000011199	MTREX	100	97.981	ENSHGLG00000019445	SKIV2L2	100	97.981	Heterocephalus_glaber_female
ENSFDAG00000011199	MTREX	100	97.981	ENSHGLG00100011833	SKIV2L2	100	97.981	Heterocephalus_glaber_male
ENSFDAG00000011199	MTREX	91	84.420	ENSHCOG00000019995	mtrex	100	84.420	Hippocampus_comes
ENSFDAG00000011199	MTREX	100	84.483	ENSIPUG00000024348	skiv2l2	100	84.623	Ictalurus_punctatus
ENSFDAG00000011199	MTREX	100	97.409	ENSSTOG00000010802	MTREX	100	97.409	Ictidomys_tridecemlineatus
ENSFDAG00000011199	MTREX	100	90.769	ENSJJAG00000020975	Mtrex	100	90.769	Jaculus_jaculus
ENSFDAG00000011199	MTREX	100	82.555	ENSKMAG00000012642	mtrex	100	82.555	Kryptolebias_marmoratus
ENSFDAG00000011199	MTREX	100	82.887	ENSLBEG00000019367	mtrex	99	85.610	Labrus_bergylta
ENSFDAG00000011199	MTREX	100	87.896	ENSLACG00000009075	MTREX	100	87.896	Latimeria_chalumnae
ENSFDAG00000011199	MTREX	100	87.428	ENSLOCG00000010186	mtrex	100	87.428	Lepisosteus_oculatus
ENSFDAG00000011199	MTREX	99	94.818	ENSLAFG00000010497	MTREX	100	94.818	Loxodonta_africana
ENSFDAG00000011199	MTREX	100	98.081	ENSMFAG00000031610	MTREX	100	98.081	Macaca_fascicularis
ENSFDAG00000011199	MTREX	100	96.839	ENSMMUG00000010379	MTREX	100	96.839	Macaca_mulatta
ENSFDAG00000011199	MTREX	100	98.081	ENSMNEG00000032746	MTREX	100	98.081	Macaca_nemestrina
ENSFDAG00000011199	MTREX	100	98.081	ENSMLEG00000041051	MTREX	100	98.081	Mandrillus_leucophaeus
ENSFDAG00000011199	MTREX	100	82.584	ENSMAMG00000016753	mtrex	98	85.772	Mastacembelus_armatus
ENSFDAG00000011199	MTREX	100	82.218	ENSMZEG00005000414	mtrex	100	82.314	Maylandia_zebra
ENSFDAG00000011199	MTREX	94	67.004	ENSMGAG00000003980	MTREX	99	67.004	Meleagris_gallopavo
ENSFDAG00000011199	MTREX	100	96.350	ENSMAUG00000010727	Mtrex	100	96.350	Mesocricetus_auratus
ENSFDAG00000011199	MTREX	100	97.985	ENSMICG00000012779	MTREX	100	97.985	Microcebus_murinus
ENSFDAG00000011199	MTREX	100	96.257	ENSMOCG00000019886	Mtrex	100	96.353	Microtus_ochrogaster
ENSFDAG00000011199	MTREX	100	81.358	ENSMMOG00000002476	mtrex	100	81.358	Mola_mola
ENSFDAG00000011199	MTREX	100	92.885	ENSMODG00000019494	MTREX	100	93.173	Monodelphis_domestica
ENSFDAG00000011199	MTREX	92	82.172	ENSMALG00000002917	mtrex	99	82.172	Monopterus_albus
ENSFDAG00000011199	MTREX	100	96.346	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.346	Mus_caroli
ENSFDAG00000011199	MTREX	100	96.538	ENSMUSG00000016018	Mtrex	100	96.538	Mus_musculus
ENSFDAG00000011199	MTREX	100	96.538	MGP_PahariEiJ_G0015967	Mtrex	100	96.538	Mus_pahari
ENSFDAG00000011199	MTREX	100	96.538	MGP_SPRETEiJ_G0019775	Mtrex	100	96.538	Mus_spretus
ENSFDAG00000011199	MTREX	100	97.409	ENSMPUG00000007619	MTREX	100	97.409	Mustela_putorius_furo
ENSFDAG00000011199	MTREX	100	95.686	ENSMLUG00000001152	MTREX	100	95.686	Myotis_lucifugus
ENSFDAG00000011199	MTREX	100	97.217	ENSNGAG00000011938	Mtrex	100	97.217	Nannospalax_galili
ENSFDAG00000011199	MTREX	100	82.314	ENSNBRG00000011293	mtrex	100	82.409	Neolamprologus_brichardi
ENSFDAG00000011199	MTREX	100	93.678	ENSNLEG00000001494	MTREX	100	93.966	Nomascus_leucogenys
ENSFDAG00000011199	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSFDAG00000011199	MTREX	100	82.404	ENSOPRG00000008009	MTREX	100	82.404	Ochotona_princeps
ENSFDAG00000011199	MTREX	100	97.121	ENSODEG00000017234	MTREX	100	97.121	Octodon_degus
ENSFDAG00000011199	MTREX	100	82.505	ENSONIG00000007587	mtrex	100	82.600	Oreochromis_niloticus
ENSFDAG00000011199	MTREX	100	97.981	ENSOCUG00000004463	MTREX	100	97.981	Oryctolagus_cuniculus
ENSFDAG00000011199	MTREX	100	82.235	ENSORLG00000005443	mtrex	100	82.235	Oryzias_latipes
ENSFDAG00000011199	MTREX	100	82.235	ENSORLG00020006329	mtrex	100	82.235	Oryzias_latipes_hni
ENSFDAG00000011199	MTREX	100	82.330	ENSORLG00015012924	mtrex	100	82.330	Oryzias_latipes_hsok
ENSFDAG00000011199	MTREX	100	81.559	ENSOMEG00000008825	mtrex	100	81.559	Oryzias_melastigma
ENSFDAG00000011199	MTREX	100	97.409	ENSOGAG00000002886	MTREX	100	97.409	Otolemur_garnettii
ENSFDAG00000011199	MTREX	100	96.842	ENSOARG00000007764	MTREX	100	96.842	Ovis_aries
ENSFDAG00000011199	MTREX	100	98.081	ENSPPAG00000039291	MTREX	100	98.081	Pan_paniscus
ENSFDAG00000011199	MTREX	100	97.217	ENSPPRG00000019701	MTREX	100	97.217	Panthera_pardus
ENSFDAG00000011199	MTREX	100	95.681	ENSPTIG00000009313	MTREX	100	95.681	Panthera_tigris_altaica
ENSFDAG00000011199	MTREX	100	98.081	ENSPTRG00000016878	MTREX	100	98.081	Pan_troglodytes
ENSFDAG00000011199	MTREX	100	97.985	ENSPANG00000009697	MTREX	100	97.985	Papio_anubis
ENSFDAG00000011199	MTREX	100	86.699	ENSPKIG00000020833	mtrex	100	86.699	Paramormyrops_kingsleyae
ENSFDAG00000011199	MTREX	100	91.162	ENSPSIG00000012150	MTREX	100	91.931	Pelodiscus_sinensis
ENSFDAG00000011199	MTREX	100	81.358	ENSPMGG00000002582	mtrex	100	81.358	Periophthalmus_magnuspinnatus
ENSFDAG00000011199	MTREX	95	64.990	ENSPMAG00000009668	mtrex	100	64.990	Petromyzon_marinus
ENSFDAG00000011199	MTREX	91	96.410	ENSPCIG00000024730	MTREX	100	96.410	Phascolarctos_cinereus
ENSFDAG00000011199	MTREX	75	87.039	ENSPFOG00000003141	mtrex	99	87.277	Poecilia_formosa
ENSFDAG00000011199	MTREX	100	83.317	ENSPLAG00000021311	mtrex	100	83.413	Poecilia_latipinna
ENSFDAG00000011199	MTREX	92	87.093	ENSPMEG00000010597	mtrex	99	87.408	Poecilia_mexicana
ENSFDAG00000011199	MTREX	100	83.222	ENSPREG00000003089	mtrex	100	83.317	Poecilia_reticulata
ENSFDAG00000011199	MTREX	98	97.951	ENSPPYG00000015469	MTREX	98	97.951	Pongo_abelii
ENSFDAG00000011199	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSFDAG00000011199	MTREX	99	92.308	ENSPCOG00000018092	MTREX	100	92.308	Propithecus_coquereli
ENSFDAG00000011199	MTREX	100	97.217	ENSPVAG00000002445	MTREX	100	97.217	Pteropus_vampyrus
ENSFDAG00000011199	MTREX	100	82.122	ENSPNYG00000006164	mtrex	100	82.218	Pundamilia_nyererei
ENSFDAG00000011199	MTREX	100	85.742	ENSPNAG00000008794	mtrex	100	85.878	Pygocentrus_nattereri
ENSFDAG00000011199	MTREX	99	96.016	ENSRNOG00000010125	Mtrex	97	96.113	Rattus_norvegicus
ENSFDAG00000011199	MTREX	100	96.353	ENSRBIG00000034930	MTREX	100	96.353	Rhinopithecus_bieti
ENSFDAG00000011199	MTREX	100	98.081	ENSRROG00000039895	MTREX	100	98.081	Rhinopithecus_roxellana
ENSFDAG00000011199	MTREX	89	55.136	YJL050W	MTR4	89	55.136	Saccharomyces_cerevisiae
ENSFDAG00000011199	MTREX	100	97.601	ENSSBOG00000026693	MTREX	100	97.601	Saimiri_boliviensis_boliviensis
ENSFDAG00000011199	MTREX	96	94.985	ENSSHAG00000004600	MTREX	100	94.985	Sarcophilus_harrisii
ENSFDAG00000011199	MTREX	100	87.165	ENSSFOG00015014355	skiv2l2	100	87.165	Scleropages_formosus
ENSFDAG00000011199	MTREX	100	82.683	ENSSMAG00000007572	mtrex	100	82.683	Scophthalmus_maximus
ENSFDAG00000011199	MTREX	100	83.365	ENSSDUG00000023789	mtrex	100	83.270	Seriola_dumerili
ENSFDAG00000011199	MTREX	100	82.983	ENSSLDG00000006301	mtrex	100	82.983	Seriola_lalandi_dorsalis
ENSFDAG00000011199	MTREX	100	93.666	ENSSARG00000008387	MTREX	100	93.666	Sorex_araneus
ENSFDAG00000011199	MTREX	100	79.155	ENSSPUG00000007071	MTREX	100	79.347	Sphenodon_punctatus
ENSFDAG00000011199	MTREX	92	86.779	ENSSPAG00000011319	mtrex	94	87.303	Stegastes_partitus
ENSFDAG00000011199	MTREX	100	97.601	ENSSSCG00000016911	MTREX	100	97.601	Sus_scrofa
ENSFDAG00000011199	MTREX	100	89.241	ENSTGUG00000002480	MTREX	100	89.241	Taeniopygia_guttata
ENSFDAG00000011199	MTREX	100	82.729	ENSTRUG00000014571	mtrex	100	82.729	Takifugu_rubripes
ENSFDAG00000011199	MTREX	100	81.670	ENSTBEG00000007769	MTREX	100	81.862	Tupaia_belangeri
ENSFDAG00000011199	MTREX	100	97.308	ENSTTRG00000008678	MTREX	100	97.308	Tursiops_truncatus
ENSFDAG00000011199	MTREX	100	97.121	ENSUAMG00000023061	MTREX	100	97.121	Ursus_americanus
ENSFDAG00000011199	MTREX	100	96.456	ENSUMAG00000009373	MTREX	99	99.195	Ursus_maritimus
ENSFDAG00000011199	MTREX	100	86.372	ENSVPAG00000011174	MTREX	100	86.372	Vicugna_pacos
ENSFDAG00000011199	MTREX	100	97.409	ENSVVUG00000021337	MTREX	100	97.409	Vulpes_vulpes
ENSFDAG00000011199	MTREX	100	87.896	ENSXETG00000032798	MTREX	100	87.896	Xenopus_tropicalis
ENSFDAG00000011199	MTREX	100	83.031	ENSXMAG00000004799	mtrex	100	83.031	Xiphophorus_maculatus