EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000011287 (Gene tree)
Gene ID: 104852563
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 18030 bases
Position: chrKN124514.1:6689913-6707942
Accession: 104852563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000001259	PRP38	PF03371.15	1.1e-62	1	1
ENSFDAP00000001257	PRP38	PF03371.15	1.2e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000015254	PRPF38A-201	930	-	ENSFDAP00000001259	309 (aa)	-	-
ENSFDAT00000015255	PRPF38A-202	1207	XM_010610320	ENSFDAP00000001257	312 (aa)	XP_010608622	UPI00053FC95E

Gene Model

Click here to download ENSFDAG00000011287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000011287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000011287	PRPF38A	100	99.679	ENSG00000134748	PRPF38A	100	99.679	Homo_sapiens
ENSFDAG00000011287	PRPF38A	72	88.688	ENSAPOG00000011652	prpf38a	100	82.637	Acanthochromis_polyacanthus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSAMEG00000009319	PRPF38A	100	99.679	Ailuropoda_melanoleuca
ENSFDAG00000011287	PRPF38A	72	86.425	ENSACIG00000012292	prpf38a	100	83.819	Amphilophus_citrinellus
ENSFDAG00000011287	PRPF38A	72	88.688	ENSAOCG00000018004	prpf38a	100	82.637	Amphiprion_ocellaris
ENSFDAG00000011287	PRPF38A	72	88.688	ENSAPEG00000021414	prpf38a	100	82.637	Amphiprion_percula
ENSFDAG00000011287	PRPF38A	72	89.140	ENSATEG00000004608	prpf38a	100	82.958	Anabas_testudineus
ENSFDAG00000011287	PRPF38A	79	97.166	ENSAPLG00000005827	PRPF38A	99	97.166	Anas_platyrhynchos
ENSFDAG00000011287	PRPF38A	100	95.513	ENSACAG00000008249	PRPF38A	100	95.513	Anolis_carolinensis
ENSFDAG00000011287	PRPF38A	100	99.679	ENSANAG00000027839	PRPF38A	100	99.679	Aotus_nancymaae
ENSFDAG00000011287	PRPF38A	100	68.371	ENSANAG00000029204	-	100	69.010	Aotus_nancymaae
ENSFDAG00000011287	PRPF38A	72	86.425	ENSACLG00000021595	prpf38a	100	81.350	Astatotilapia_calliptera
ENSFDAG00000011287	PRPF38A	100	82.109	ENSAMXG00000029274	prpf38a	100	82.109	Astyanax_mexicanus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSBTAG00000002720	PRPF38A	100	99.679	Bos_taurus
ENSFDAG00000011287	PRPF38A	63	62.564	WBGene00008380	prp-38	67	61.574	Caenorhabditis_elegans
ENSFDAG00000011287	PRPF38A	100	99.679	ENSCJAG00000021594	PRPF38A	100	99.679	Callithrix_jacchus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSCAFG00000003740	PRPF38A	100	99.679	Canis_familiaris
ENSFDAG00000011287	PRPF38A	100	99.679	ENSCAFG00020010939	PRPF38A	100	99.679	Canis_lupus_dingo
ENSFDAG00000011287	PRPF38A	100	99.679	ENSCHIG00000024730	PRPF38A	100	99.679	Capra_hircus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSTSYG00000009868	-	100	99.679	Carlito_syrichta
ENSFDAG00000011287	PRPF38A	86	98.513	ENSTSYG00000031994	-	95	98.513	Carlito_syrichta
ENSFDAG00000011287	PRPF38A	100	99.679	ENSCPOG00000005079	PRPF38A	100	99.679	Cavia_porcellus
ENSFDAG00000011287	PRPF38A	100	99.359	ENSCCAG00000026502	PRPF38A	100	99.359	Cebus_capucinus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSCATG00000032296	PRPF38A	100	99.679	Cercocebus_atys
ENSFDAG00000011287	PRPF38A	100	64.423	ENSCATG00000044190	-	100	63.141	Cercocebus_atys
ENSFDAG00000011287	PRPF38A	100	99.679	ENSCLAG00000005816	PRPF38A	100	99.679	Chinchilla_lanigera
ENSFDAG00000011287	PRPF38A	78	97.917	ENSCHOG00000008388	PRPF38A	77	97.917	Choloepus_hoffmanni
ENSFDAG00000011287	PRPF38A	100	97.756	ENSCPBG00000014791	PRPF38A	100	97.756	Chrysemys_picta_bellii
ENSFDAG00000011287	PRPF38A	68	71.429	ENSCSAVG00000009580	-	78	65.678	Ciona_savignyi
ENSFDAG00000011287	PRPF38A	96	99.666	ENSCANG00000032608	PRPF38A	100	99.666	Colobus_angolensis_palliatus
ENSFDAG00000011287	PRPF38A	100	99.359	ENSCGRG00001018502	-	100	99.359	Cricetulus_griseus_chok1gshd
ENSFDAG00000011287	PRPF38A	86	77.778	ENSCGRG00001002557	-	80	85.169	Cricetulus_griseus_chok1gshd
ENSFDAG00000011287	PRPF38A	100	99.359	ENSCGRG00000014868	Prpf38a	100	99.359	Cricetulus_griseus_crigri
ENSFDAG00000011287	PRPF38A	72	87.783	ENSCSEG00000001269	prpf38a	87	84.706	Cynoglossus_semilaevis
ENSFDAG00000011287	PRPF38A	72	90.498	ENSCVAG00000012305	prpf38a	100	83.601	Cyprinodon_variegatus
ENSFDAG00000011287	PRPF38A	100	81.470	ENSDARG00000039213	prpf38a	100	81.789	Danio_rerio
ENSFDAG00000011287	PRPF38A	100	99.679	ENSDNOG00000042326	PRPF38A	100	99.679	Dasypus_novemcinctus
ENSFDAG00000011287	PRPF38A	84	83.270	ENSDORG00000025371	-	89	81.679	Dipodomys_ordii
ENSFDAG00000011287	PRPF38A	84	83.270	ENSDORG00000023691	-	89	81.679	Dipodomys_ordii
ENSFDAG00000011287	PRPF38A	100	86.218	ENSDORG00000023857	-	100	86.218	Dipodomys_ordii
ENSFDAG00000011287	PRPF38A	64	75.635	FBgn0050342	Prp38	57	76.596	Drosophila_melanogaster
ENSFDAG00000011287	PRPF38A	76	81.092	ENSEBUG00000012588	prpf38a	99	77.492	Eptatretus_burgeri
ENSFDAG00000011287	PRPF38A	100	99.679	ENSEASG00005014427	PRPF38A	100	99.679	Equus_asinus_asinus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSECAG00000022628	PRPF38A	100	99.679	Equus_caballus
ENSFDAG00000011287	PRPF38A	72	86.878	ENSELUG00000021094	prpf38a	100	81.994	Esox_lucius
ENSFDAG00000011287	PRPF38A	100	99.679	ENSFCAG00000002518	PRPF38A	100	99.679	Felis_catus
ENSFDAG00000011287	PRPF38A	99	84.740	ENSFALG00000003612	-	99	84.740	Ficedula_albicollis
ENSFDAG00000011287	PRPF38A	87	96.310	ENSFALG00000005598	-	100	96.310	Ficedula_albicollis
ENSFDAG00000011287	PRPF38A	84	78.788	ENSFHEG00000014317	prpf38a	87	85.938	Fundulus_heteroclitus
ENSFDAG00000011287	PRPF38A	54	94.578	ENSGMOG00000011384	prpf38a	54	94.578	Gadus_morhua
ENSFDAG00000011287	PRPF38A	100	97.436	ENSGALG00000010627	PRPF38A	100	97.436	Gallus_gallus
ENSFDAG00000011287	PRPF38A	72	90.498	ENSGAFG00000012422	prpf38a	100	83.923	Gambusia_affinis
ENSFDAG00000011287	PRPF38A	72	86.099	ENSGACG00000005423	prpf38a	100	81.150	Gasterosteus_aculeatus
ENSFDAG00000011287	PRPF38A	100	98.077	ENSGAGG00000020547	PRPF38A	100	98.077	Gopherus_agassizii
ENSFDAG00000011287	PRPF38A	100	99.679	ENSGGOG00000003940	PRPF38A	100	99.679	Gorilla_gorilla
ENSFDAG00000011287	PRPF38A	61	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSFDAG00000011287	PRPF38A	100	84.790	ENSHGLG00000007918	-	100	85.113	Heterocephalus_glaber_female
ENSFDAG00000011287	PRPF38A	100	99.679	ENSHGLG00000000475	PRPF38A	100	99.679	Heterocephalus_glaber_female
ENSFDAG00000011287	PRPF38A	100	84.790	ENSHGLG00100003928	-	100	85.113	Heterocephalus_glaber_male
ENSFDAG00000011287	PRPF38A	100	99.679	ENSHGLG00100008935	PRPF38A	100	99.679	Heterocephalus_glaber_male
ENSFDAG00000011287	PRPF38A	87	69.373	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSFDAG00000011287	PRPF38A	75	87.500	ENSIPUG00000005757	prpf38a	100	80.707	Ictalurus_punctatus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSSTOG00000015610	PRPF38A	100	99.679	Ictidomys_tridecemlineatus
ENSFDAG00000011287	PRPF38A	100	98.397	ENSJJAG00000015811	Prpf38a	100	98.397	Jaculus_jaculus
ENSFDAG00000011287	PRPF38A	72	90.045	ENSKMAG00000006588	prpf38a	100	83.280	Kryptolebias_marmoratus
ENSFDAG00000011287	PRPF38A	96	78.859	ENSLBEG00000020585	prpf38a	100	80.707	Labrus_bergylta
ENSFDAG00000011287	PRPF38A	100	91.987	ENSLACG00000011495	PRPF38A	100	91.987	Latimeria_chalumnae
ENSFDAG00000011287	PRPF38A	100	80.323	ENSLOCG00000006262	prpf38a	100	82.958	Lepisosteus_oculatus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSLAFG00000025862	PRPF38A	100	99.679	Loxodonta_africana
ENSFDAG00000011287	PRPF38A	100	99.679	ENSMFAG00000039449	PRPF38A	100	99.679	Macaca_fascicularis
ENSFDAG00000011287	PRPF38A	87	98.897	ENSMMUG00000014333	PRPF38A	98	98.897	Macaca_mulatta
ENSFDAG00000011287	PRPF38A	100	64.423	ENSMNEG00000040242	-	100	63.462	Macaca_nemestrina
ENSFDAG00000011287	PRPF38A	100	99.679	ENSMNEG00000031221	PRPF38A	100	99.679	Macaca_nemestrina
ENSFDAG00000011287	PRPF38A	100	99.679	ENSMLEG00000041105	PRPF38A	100	99.679	Mandrillus_leucophaeus
ENSFDAG00000011287	PRPF38A	72	88.235	ENSMAMG00000015431	prpf38a	100	82.637	Mastacembelus_armatus
ENSFDAG00000011287	PRPF38A	72	86.425	ENSMZEG00005017838	prpf38a	100	81.350	Maylandia_zebra
ENSFDAG00000011287	PRPF38A	96	97.324	ENSMGAG00000011176	PRPF38A	100	97.324	Meleagris_gallopavo
ENSFDAG00000011287	PRPF38A	85	94.697	ENSMAUG00000018029	-	98	90.698	Mesocricetus_auratus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSMICG00000014193	PRPF38A	100	99.679	Microcebus_murinus
ENSFDAG00000011287	PRPF38A	100	99.359	ENSMOCG00000013080	Prpf38a	100	99.359	Microtus_ochrogaster
ENSFDAG00000011287	PRPF38A	83	82.353	ENSMMOG00000016972	prpf38a	100	78.135	Mola_mola
ENSFDAG00000011287	PRPF38A	100	98.083	ENSMODG00000000644	PRPF38A	100	98.083	Monodelphis_domestica
ENSFDAG00000011287	PRPF38A	72	88.235	ENSMALG00000019363	prpf38a	97	82.958	Monopterus_albus
ENSFDAG00000011287	PRPF38A	100	98.397	MGP_CAROLIEiJ_G0026269	Prpf38a	100	98.397	Mus_caroli
ENSFDAG00000011287	PRPF38A	100	98.397	ENSMUSG00000063800	Prpf38a	100	98.397	Mus_musculus
ENSFDAG00000011287	PRPF38A	100	98.397	MGP_PahariEiJ_G0028602	Prpf38a	100	98.397	Mus_pahari
ENSFDAG00000011287	PRPF38A	100	98.077	MGP_SPRETEiJ_G0027238	Prpf38a	100	98.522	Mus_spretus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSMPUG00000006896	PRPF38A	100	99.679	Mustela_putorius_furo
ENSFDAG00000011287	PRPF38A	100	99.359	ENSNGAG00000011884	Prpf38a	100	99.359	Nannospalax_galili
ENSFDAG00000011287	PRPF38A	72	85.068	ENSNBRG00000004013	prpf38a	98	82.524	Neolamprologus_brichardi
ENSFDAG00000011287	PRPF38A	97	73.510	ENSNLEG00000012592	-	99	73.510	Nomascus_leucogenys
ENSFDAG00000011287	PRPF38A	100	67.308	ENSNLEG00000033398	-	94	67.308	Nomascus_leucogenys
ENSFDAG00000011287	PRPF38A	93	99.654	ENSNLEG00000017999	PRPF38A	93	99.654	Nomascus_leucogenys
ENSFDAG00000011287	PRPF38A	100	94.551	ENSMEUG00000003860	PRPF38A	100	94.551	Notamacropus_eugenii
ENSFDAG00000011287	PRPF38A	77	99.583	ENSOPRG00000008985	PRPF38A	100	99.583	Ochotona_princeps
ENSFDAG00000011287	PRPF38A	100	99.679	ENSODEG00000005869	PRPF38A	100	99.679	Octodon_degus
ENSFDAG00000011287	PRPF38A	72	86.878	ENSONIG00000007816	prpf38a	100	81.672	Oreochromis_niloticus
ENSFDAG00000011287	PRPF38A	100	64.650	ENSOANG00000009541	-	100	64.650	Ornithorhynchus_anatinus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSOCUG00000000963	PRPF38A	100	99.679	Oryctolagus_cuniculus
ENSFDAG00000011287	PRPF38A	96	82.000	ENSORLG00000013485	prpf38a	99	83.548	Oryzias_latipes
ENSFDAG00000011287	PRPF38A	96	82.000	ENSORLG00020002130	prpf38a	99	83.548	Oryzias_latipes_hni
ENSFDAG00000011287	PRPF38A	96	81.667	ENSORLG00015021393	prpf38a	99	83.226	Oryzias_latipes_hsok
ENSFDAG00000011287	PRPF38A	96	81.544	ENSOMEG00000016333	prpf38a	100	82.958	Oryzias_melastigma
ENSFDAG00000011287	PRPF38A	100	99.679	ENSOGAG00000005423	PRPF38A	100	99.679	Otolemur_garnettii
ENSFDAG00000011287	PRPF38A	100	99.679	ENSOARG00000005373	PRPF38A	100	99.679	Ovis_aries
ENSFDAG00000011287	PRPF38A	100	77.564	ENSPPAG00000033867	-	100	77.564	Pan_paniscus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSPPAG00000030905	PRPF38A	100	99.679	Pan_paniscus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSPPRG00000013268	PRPF38A	100	99.679	Panthera_pardus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSPTIG00000015419	PRPF38A	100	99.679	Panthera_tigris_altaica
ENSFDAG00000011287	PRPF38A	100	99.679	ENSPTRG00000000739	PRPF38A	100	99.679	Pan_troglodytes
ENSFDAG00000011287	PRPF38A	100	99.679	ENSPANG00000015483	PRPF38A	100	99.679	Papio_anubis
ENSFDAG00000011287	PRPF38A	100	79.612	ENSPKIG00000011439	prpf38a	100	82.258	Paramormyrops_kingsleyae
ENSFDAG00000011287	PRPF38A	100	97.436	ENSPSIG00000017487	PRPF38A	100	97.436	Pelodiscus_sinensis
ENSFDAG00000011287	PRPF38A	70	89.401	ENSPMGG00000021352	prpf38a	99	78.758	Periophthalmus_magnuspinnatus
ENSFDAG00000011287	PRPF38A	100	99.359	ENSPEMG00000023277	-	100	99.359	Peromyscus_maniculatus_bairdii
ENSFDAG00000011287	PRPF38A	100	93.333	ENSPEMG00000011212	-	100	93.333	Peromyscus_maniculatus_bairdii
ENSFDAG00000011287	PRPF38A	100	97.764	ENSPCIG00000022369	-	100	97.764	Phascolarctos_cinereus
ENSFDAG00000011287	PRPF38A	83	81.467	ENSPFOG00000004248	prpf38a	100	83.923	Poecilia_formosa
ENSFDAG00000011287	PRPF38A	92	77.055	ENSPLAG00000010328	prpf38a	100	83.923	Poecilia_latipinna
ENSFDAG00000011287	PRPF38A	84	79.323	ENSPMEG00000011804	prpf38a	100	83.923	Poecilia_mexicana
ENSFDAG00000011287	PRPF38A	95	73.667	ENSPREG00000002835	prpf38a	80	78.764	Poecilia_reticulata
ENSFDAG00000011287	PRPF38A	100	91.167	ENSPPYG00000001348	PRPF38A	100	91.167	Pongo_abelii
ENSFDAG00000011287	PRPF38A	100	99.038	ENSPCAG00000013328	PRPF38A	100	99.038	Procavia_capensis
ENSFDAG00000011287	PRPF38A	100	76.923	ENSPCOG00000020709	-	100	76.699	Propithecus_coquereli
ENSFDAG00000011287	PRPF38A	100	99.679	ENSPCOG00000016387	-	100	99.679	Propithecus_coquereli
ENSFDAG00000011287	PRPF38A	100	99.679	ENSPVAG00000009803	PRPF38A	100	99.679	Pteropus_vampyrus
ENSFDAG00000011287	PRPF38A	72	86.425	ENSPNYG00000005571	prpf38a	100	81.350	Pundamilia_nyererei
ENSFDAG00000011287	PRPF38A	100	82.109	ENSPNAG00000010399	prpf38a	100	82.109	Pygocentrus_nattereri
ENSFDAG00000011287	PRPF38A	100	99.038	ENSRNOG00000009451	Prpf38a	100	99.038	Rattus_norvegicus
ENSFDAG00000011287	PRPF38A	100	62.179	ENSRBIG00000034053	-	100	58.974	Rhinopithecus_bieti
ENSFDAG00000011287	PRPF38A	100	99.679	ENSRBIG00000036442	PRPF38A	100	99.679	Rhinopithecus_bieti
ENSFDAG00000011287	PRPF38A	100	99.679	ENSRROG00000032788	PRPF38A	100	99.679	Rhinopithecus_roxellana
ENSFDAG00000011287	PRPF38A	98	78.431	ENSRROG00000040003	-	99	77.888	Rhinopithecus_roxellana
ENSFDAG00000011287	PRPF38A	100	99.679	ENSSBOG00000019515	PRPF38A	100	99.679	Saimiri_boliviensis_boliviensis
ENSFDAG00000011287	PRPF38A	87	97.417	ENSSHAG00000006906	-	100	97.417	Sarcophilus_harrisii
ENSFDAG00000011287	PRPF38A	96	70.724	ENSSHAG00000006029	-	83	75.494	Sarcophilus_harrisii
ENSFDAG00000011287	PRPF38A	100	79.032	ENSSFOG00015013572	prpf38a	100	81.029	Scleropages_formosus
ENSFDAG00000011287	PRPF38A	72	88.688	ENSSMAG00000015379	prpf38a	99	82.524	Scophthalmus_maximus
ENSFDAG00000011287	PRPF38A	72	89.140	ENSSDUG00000001324	prpf38a	100	83.280	Seriola_dumerili
ENSFDAG00000011287	PRPF38A	72	89.140	ENSSLDG00000014803	prpf38a	100	83.280	Seriola_lalandi_dorsalis
ENSFDAG00000011287	PRPF38A	100	82.372	ENSSARG00000014458	PRPF38A	100	82.372	Sorex_araneus
ENSFDAG00000011287	PRPF38A	100	95.833	ENSSPUG00000013259	PRPF38A	100	95.833	Sphenodon_punctatus
ENSFDAG00000011287	PRPF38A	72	70.588	ENSSPAG00000010449	prpf38a	100	66.667	Stegastes_partitus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSSSCG00000028288	PRPF38A	100	99.679	Sus_scrofa
ENSFDAG00000011287	PRPF38A	100	93.269	ENSTGUG00000008995	PRPF38A	100	93.269	Taeniopygia_guttata
ENSFDAG00000011287	PRPF38A	72	88.235	ENSTRUG00000003374	prpf38a	78	84.252	Takifugu_rubripes
ENSFDAG00000011287	PRPF38A	72	86.547	ENSTNIG00000005533	prpf38a	100	81.150	Tetraodon_nigroviridis
ENSFDAG00000011287	PRPF38A	100	99.038	ENSTBEG00000000725	PRPF38A	100	99.038	Tupaia_belangeri
ENSFDAG00000011287	PRPF38A	100	99.679	ENSTTRG00000016139	PRPF38A	100	99.679	Tursiops_truncatus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSUAMG00000000625	PRPF38A	100	99.679	Ursus_americanus
ENSFDAG00000011287	PRPF38A	100	99.679	ENSUMAG00000022674	PRPF38A	100	99.679	Ursus_maritimus
ENSFDAG00000011287	PRPF38A	75	99.567	ENSVPAG00000000907	PRPF38A	100	94.231	Vicugna_pacos
ENSFDAG00000011287	PRPF38A	100	99.679	ENSVVUG00000004475	PRPF38A	100	99.679	Vulpes_vulpes
ENSFDAG00000011287	PRPF38A	100	84.026	ENSXETG00000008060	prpf38a	100	87.859	Xenopus_tropicalis
ENSFDAG00000011287	PRPF38A	72	88.341	ENSXCOG00000007393	prpf38a	100	77.460	Xiphophorus_couchianus
ENSFDAG00000011287	PRPF38A	72	90.498	ENSXMAG00000026143	prpf38a	100	83.923	Xiphophorus_maculatus