EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000011319 (Gene tree)
Gene ID: 104860440
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 119311 bases
Position: chrKN121962.1:1411231-1530541
Accession: 104860440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000001291	PUF	PF00806.19	1.4e-70	1	8
ENSFDAP00000001291	PUF	PF00806.19	1.4e-70	2	8
ENSFDAP00000001291	PUF	PF00806.19	1.4e-70	3	8
ENSFDAP00000001291	PUF	PF00806.19	1.4e-70	4	8
ENSFDAP00000001291	PUF	PF00806.19	1.4e-70	5	8
ENSFDAP00000001291	PUF	PF00806.19	1.4e-70	6	8
ENSFDAP00000001291	PUF	PF00806.19	1.4e-70	7	8
ENSFDAP00000001291	PUF	PF00806.19	1.4e-70	8	8
ENSFDAP00000001299	PUF	PF00806.19	1.2e-69	1	8
ENSFDAP00000001299	PUF	PF00806.19	1.2e-69	2	8
ENSFDAP00000001299	PUF	PF00806.19	1.2e-69	3	8
ENSFDAP00000001299	PUF	PF00806.19	1.2e-69	4	8
ENSFDAP00000001299	PUF	PF00806.19	1.2e-69	5	8
ENSFDAP00000001299	PUF	PF00806.19	1.2e-69	6	8
ENSFDAP00000001299	PUF	PF00806.19	1.2e-69	7	8
ENSFDAP00000001299	PUF	PF00806.19	1.2e-69	8	8
ENSFDAP00000001294	PUF	PF00806.19	2.7e-69	1	8
ENSFDAP00000001294	PUF	PF00806.19	2.7e-69	2	8
ENSFDAP00000001294	PUF	PF00806.19	2.7e-69	3	8
ENSFDAP00000001294	PUF	PF00806.19	2.7e-69	4	8
ENSFDAP00000001294	PUF	PF00806.19	2.7e-69	5	8
ENSFDAP00000001294	PUF	PF00806.19	2.7e-69	6	8
ENSFDAP00000001294	PUF	PF00806.19	2.7e-69	7	8
ENSFDAP00000001294	PUF	PF00806.19	2.7e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000015285	PUM1-201	3924	XM_010621621	ENSFDAP00000001299	1092 (aa)	XP_010619923	UPI00054018EB
ENSFDAT00000015305	PUM1-203	2835	-	ENSFDAP00000001291	944 (aa)	-	-
ENSFDAT00000015286	PUM1-202	4218	XM_010621615	ENSFDAP00000001294	1189 (aa)	XP_010619917	UPI00053FFD60

Gene Model

Click here to download ENSFDAG00000011319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000011319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000011319	PUM1	88	77.570	ENSFDAG00000019685	PUM2	100	76.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000011319	PUM1	100	99.327	ENSG00000134644	PUM1	100	99.327	Homo_sapiens
ENSFDAG00000011319	PUM1	100	80.941	ENSAPOG00000021632	pum1	100	90.777	Acanthochromis_polyacanthus
ENSFDAG00000011319	PUM1	100	99.306	ENSAMEG00000017656	PUM1	97	98.908	Ailuropoda_melanoleuca
ENSFDAG00000011319	PUM1	100	80.941	ENSACIG00000021013	pum1	100	76.179	Amphilophus_citrinellus
ENSFDAG00000011319	PUM1	100	80.941	ENSAOCG00000003944	pum1	100	90.777	Amphiprion_ocellaris
ENSFDAG00000011319	PUM1	100	80.941	ENSAPEG00000014550	pum1	100	90.777	Amphiprion_percula
ENSFDAG00000011319	PUM1	100	80.941	ENSATEG00000016004	pum1	100	90.777	Anabas_testudineus
ENSFDAG00000011319	PUM1	100	97.637	ENSAPLG00000009351	PUM1	100	97.393	Anas_platyrhynchos
ENSFDAG00000011319	PUM1	100	95.890	ENSACAG00000000682	PUM1	98	95.374	Anolis_carolinensis
ENSFDAG00000011319	PUM1	100	99.306	ENSANAG00000027865	PUM1	100	99.306	Aotus_nancymaae
ENSFDAG00000011319	PUM1	90	76.481	ENSACLG00000019354	pum1	100	78.743	Astatotilapia_calliptera
ENSFDAG00000011319	PUM1	100	84.367	ENSAMXG00000020607	pum1	96	78.947	Astyanax_mexicanus
ENSFDAG00000011319	PUM1	100	99.306	ENSBTAG00000018979	PUM1	100	99.306	Bos_taurus
ENSFDAG00000011319	PUM1	100	99.306	ENSCJAG00000006035	PUM1	100	99.306	Callithrix_jacchus
ENSFDAG00000011319	PUM1	100	99.306	ENSCAFG00000011205	PUM1	100	96.720	Canis_familiaris
ENSFDAG00000011319	PUM1	92	96.906	ENSCAFG00020024616	PUM1	99	98.292	Canis_lupus_dingo
ENSFDAG00000011319	PUM1	100	99.306	ENSCHIG00000012952	PUM1	100	98.823	Capra_hircus
ENSFDAG00000011319	PUM1	100	98.991	ENSTSYG00000008868	PUM1	100	98.991	Carlito_syrichta
ENSFDAG00000011319	PUM1	100	100.000	ENSCPOG00000031613	PUM1	100	100.000	Cavia_porcellus
ENSFDAG00000011319	PUM1	100	99.306	ENSCATG00000017991	PUM1	100	99.513	Cercocebus_atys
ENSFDAG00000011319	PUM1	100	100.000	ENSCLAG00000007662	PUM1	100	100.000	Chinchilla_lanigera
ENSFDAG00000011319	PUM1	100	99.306	ENSCSAG00000001028	PUM1	100	98.417	Chlorocebus_sabaeus
ENSFDAG00000011319	PUM1	92	99.306	ENSCHOG00000010245	PUM1	93	96.264	Choloepus_hoffmanni
ENSFDAG00000011319	PUM1	100	97.458	ENSCPBG00000009288	PUM1	100	97.567	Chrysemys_picta_bellii
ENSFDAG00000011319	PUM1	100	99.306	ENSCANG00000042606	PUM1	100	99.306	Colobus_angolensis_palliatus
ENSFDAG00000011319	PUM1	100	98.810	ENSCGRG00001024949	Pum1	100	98.810	Cricetulus_griseus_chok1gshd
ENSFDAG00000011319	PUM1	100	98.810	ENSCGRG00000014197	Pum1	100	98.810	Cricetulus_griseus_crigri
ENSFDAG00000011319	PUM1	90	75.926	ENSCSEG00000015981	pum1	100	77.613	Cynoglossus_semilaevis
ENSFDAG00000011319	PUM1	100	80.569	ENSCVAG00000007043	pum1	100	75.475	Cyprinodon_variegatus
ENSFDAG00000011319	PUM1	100	84.491	ENSDARG00000099256	pum1	100	79.198	Danio_rerio
ENSFDAG00000011319	PUM1	100	99.306	ENSDNOG00000010939	PUM1	100	98.738	Dasypus_novemcinctus
ENSFDAG00000011319	PUM1	85	99.517	ENSDORG00000001875	Pum1	100	99.513	Dipodomys_ordii
ENSFDAG00000011319	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.366	Echinops_telfairi
ENSFDAG00000011319	PUM1	100	99.306	ENSEASG00005010813	PUM1	100	98.654	Equus_asinus_asinus
ENSFDAG00000011319	PUM1	100	98.654	ENSECAG00000021369	PUM1	100	98.654	Equus_caballus
ENSFDAG00000011319	PUM1	80	99.306	ENSEEUG00000003871	PUM1	74	99.661	Erinaceus_europaeus
ENSFDAG00000011319	PUM1	100	83.109	ENSELUG00000002409	pum1	100	83.292	Esox_lucius
ENSFDAG00000011319	PUM1	100	99.306	ENSFCAG00000010374	PUM1	100	99.583	Felis_catus
ENSFDAG00000011319	PUM1	100	96.044	ENSFALG00000001214	PUM1	97	94.724	Ficedula_albicollis
ENSFDAG00000011319	PUM1	70	88.023	ENSGMOG00000010491	pum1	100	74.587	Gadus_morhua
ENSFDAG00000011319	PUM1	100	97.761	ENSGALG00000042598	PUM1	100	97.561	Gallus_gallus
ENSFDAG00000011319	PUM1	100	80.693	ENSGAFG00000015617	pum1	100	90.049	Gambusia_affinis
ENSFDAG00000011319	PUM1	100	80.788	ENSGACG00000005717	pum1	100	76.112	Gasterosteus_aculeatus
ENSFDAG00000011319	PUM1	100	97.264	ENSGAGG00000001290	PUM1	100	97.140	Gopherus_agassizii
ENSFDAG00000011319	PUM1	100	99.306	ENSGGOG00000011983	PUM1	100	99.306	Gorilla_gorilla
ENSFDAG00000011319	PUM1	100	80.817	ENSHBUG00000018718	pum1	100	76.053	Haplochromis_burtoni
ENSFDAG00000011319	PUM1	100	99.664	ENSHGLG00000013819	Pum1	100	99.664	Heterocephalus_glaber_female
ENSFDAG00000011319	PUM1	100	99.664	ENSHGLG00100008621	Pum1	100	99.664	Heterocephalus_glaber_male
ENSFDAG00000011319	PUM1	90	74.838	ENSHCOG00000005149	pum1	100	75.046	Hippocampus_comes
ENSFDAG00000011319	PUM1	100	82.512	ENSIPUG00000020421	pum1	100	77.741	Ictalurus_punctatus
ENSFDAG00000011319	PUM1	100	99.359	ENSSTOG00000010757	PUM1	100	99.359	Ictidomys_tridecemlineatus
ENSFDAG00000011319	PUM1	100	99.306	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSFDAG00000011319	PUM1	100	80.198	ENSKMAG00000003481	pum1	100	75.640	Kryptolebias_marmoratus
ENSFDAG00000011319	PUM1	100	80.297	ENSLBEG00000002527	pum1	100	75.682	Labrus_bergylta
ENSFDAG00000011319	PUM1	100	88.352	ENSLACG00000017188	PUM1	99	86.428	Latimeria_chalumnae
ENSFDAG00000011319	PUM1	100	91.304	ENSLOCG00000005210	pum1	99	87.980	Lepisosteus_oculatus
ENSFDAG00000011319	PUM1	100	98.486	ENSLAFG00000003178	PUM1	100	98.486	Loxodonta_africana
ENSFDAG00000011319	PUM1	100	99.306	ENSMFAG00000010291	PUM1	100	99.513	Macaca_fascicularis
ENSFDAG00000011319	PUM1	100	99.306	ENSMMUG00000013520	PUM1	100	99.306	Macaca_mulatta
ENSFDAG00000011319	PUM1	100	99.306	ENSMNEG00000034639	PUM1	100	99.306	Macaca_nemestrina
ENSFDAG00000011319	PUM1	100	99.306	ENSMLEG00000038743	PUM1	100	99.306	Mandrillus_leucophaeus
ENSFDAG00000011319	PUM1	100	80.693	ENSMAMG00000011606	pum1	100	76.053	Mastacembelus_armatus
ENSFDAG00000011319	PUM1	100	80.817	ENSMZEG00005005834	pum1	100	76.053	Maylandia_zebra
ENSFDAG00000011319	PUM1	100	97.388	ENSMGAG00000000724	PUM1	100	97.309	Meleagris_gallopavo
ENSFDAG00000011319	PUM1	100	98.907	ENSMAUG00000022090	Pum1	100	98.907	Mesocricetus_auratus
ENSFDAG00000011319	PUM1	100	98.991	ENSMICG00000007713	-	100	98.991	Microcebus_murinus
ENSFDAG00000011319	PUM1	99	97.183	ENSMICG00000012213	-	99	96.799	Microcebus_murinus
ENSFDAG00000011319	PUM1	100	98.823	ENSMOCG00000015463	Pum1	100	98.823	Microtus_ochrogaster
ENSFDAG00000011319	PUM1	90	88.046	ENSMMOG00000019817	pum1	100	90.534	Mola_mola
ENSFDAG00000011319	PUM1	100	97.484	ENSMODG00000017067	PUM1	100	97.481	Monodelphis_domestica
ENSFDAG00000011319	PUM1	90	88.276	ENSMALG00000016399	pum1	100	90.777	Monopterus_albus
ENSFDAG00000011319	PUM1	100	98.570	MGP_CAROLIEiJ_G0026549	Pum1	100	98.570	Mus_caroli
ENSFDAG00000011319	PUM1	100	98.823	ENSMUSG00000028580	Pum1	100	98.823	Mus_musculus
ENSFDAG00000011319	PUM1	100	98.654	MGP_PahariEiJ_G0028881	Pum1	100	98.654	Mus_pahari
ENSFDAG00000011319	PUM1	100	98.738	MGP_SPRETEiJ_G0027529	Pum1	100	98.738	Mus_spretus
ENSFDAG00000011319	PUM1	100	99.306	ENSMPUG00000015454	PUM1	100	98.570	Mustela_putorius_furo
ENSFDAG00000011319	PUM1	100	99.306	ENSMLUG00000006490	PUM1	100	98.738	Myotis_lucifugus
ENSFDAG00000011319	PUM1	100	99.159	ENSNGAG00000002378	Pum1	100	99.159	Nannospalax_galili
ENSFDAG00000011319	PUM1	100	78.033	ENSNBRG00000010689	pum1	100	83.086	Neolamprologus_brichardi
ENSFDAG00000011319	PUM1	100	98.611	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSFDAG00000011319	PUM1	84	96.622	ENSMEUG00000000976	-	82	96.622	Notamacropus_eugenii
ENSFDAG00000011319	PUM1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSFDAG00000011319	PUM1	100	99.359	ENSODEG00000003465	PUM1	100	99.359	Octodon_degus
ENSFDAG00000011319	PUM1	100	81.250	ENSONIG00000002290	pum1	100	76.301	Oreochromis_niloticus
ENSFDAG00000011319	PUM1	81	77.664	ENSOANG00000004902	-	100	77.222	Ornithorhynchus_anatinus
ENSFDAG00000011319	PUM1	100	99.306	ENSOCUG00000008641	PUM1	99	98.654	Oryctolagus_cuniculus
ENSFDAG00000011319	PUM1	100	81.683	ENSORLG00000011482	pum1	100	75.802	Oryzias_latipes
ENSFDAG00000011319	PUM1	100	81.807	ENSORLG00020019461	pum1	100	75.802	Oryzias_latipes_hni
ENSFDAG00000011319	PUM1	100	81.807	ENSORLG00015011375	pum1	100	75.885	Oryzias_latipes_hsok
ENSFDAG00000011319	PUM1	90	89.425	ENSOMEG00000009312	pum1	100	90.049	Oryzias_melastigma
ENSFDAG00000011319	PUM1	100	98.611	ENSOGAG00000011063	PUM1	100	96.306	Otolemur_garnettii
ENSFDAG00000011319	PUM1	100	99.306	ENSOARG00000001899	PUM1	100	98.783	Ovis_aries
ENSFDAG00000011319	PUM1	100	99.306	ENSPPAG00000044003	PUM1	100	99.306	Pan_paniscus
ENSFDAG00000011319	PUM1	100	99.306	ENSPPRG00000001370	PUM1	100	99.306	Panthera_pardus
ENSFDAG00000011319	PUM1	100	99.306	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSFDAG00000011319	PUM1	100	99.306	ENSPTRG00000000453	PUM1	100	99.306	Pan_troglodytes
ENSFDAG00000011319	PUM1	100	99.306	ENSPANG00000016338	PUM1	100	99.513	Papio_anubis
ENSFDAG00000011319	PUM1	94	93.447	ENSPKIG00000010578	pum1	100	77.906	Paramormyrops_kingsleyae
ENSFDAG00000011319	PUM1	100	97.631	ENSPSIG00000014118	PUM1	100	97.477	Pelodiscus_sinensis
ENSFDAG00000011319	PUM1	100	76.403	ENSPMGG00000005836	pum1	100	81.540	Periophthalmus_magnuspinnatus
ENSFDAG00000011319	PUM1	100	98.991	ENSPEMG00000010009	Pum1	100	98.991	Peromyscus_maniculatus_bairdii
ENSFDAG00000011319	PUM1	100	97.694	ENSPCIG00000014151	PUM1	100	97.761	Phascolarctos_cinereus
ENSFDAG00000011319	PUM1	93	83.374	ENSPFOG00000007289	pum1	99	82.110	Poecilia_formosa
ENSFDAG00000011319	PUM1	100	82.469	ENSPLAG00000007256	pum1	100	77.847	Poecilia_latipinna
ENSFDAG00000011319	PUM1	85	82.593	ENSPMEG00000019543	pum1	99	78.033	Poecilia_mexicana
ENSFDAG00000011319	PUM1	100	80.693	ENSPREG00000005195	pum1	100	80.630	Poecilia_reticulata
ENSFDAG00000011319	PUM1	100	99.306	ENSPPYG00000001621	PUM1	100	97.279	Pongo_abelii
ENSFDAG00000011319	PUM1	84	98.765	ENSPCAG00000001979	PUM1	74	98.765	Procavia_capensis
ENSFDAG00000011319	PUM1	100	98.991	ENSPCOG00000004398	PUM1	100	98.991	Propithecus_coquereli
ENSFDAG00000011319	PUM1	100	99.306	ENSPVAG00000005207	PUM1	97	96.888	Pteropus_vampyrus
ENSFDAG00000011319	PUM1	100	80.817	ENSPNYG00000009518	pum1	100	81.311	Pundamilia_nyererei
ENSFDAG00000011319	PUM1	100	84.615	ENSPNAG00000026728	pum1	100	80.396	Pygocentrus_nattereri
ENSFDAG00000011319	PUM1	100	98.627	ENSRNOG00000011709	Pum1	100	98.570	Rattus_norvegicus
ENSFDAG00000011319	PUM1	100	99.306	ENSRBIG00000042521	PUM1	100	99.513	Rhinopithecus_bieti
ENSFDAG00000011319	PUM1	100	99.306	ENSRROG00000020156	PUM1	100	99.306	Rhinopithecus_roxellana
ENSFDAG00000011319	PUM1	100	99.306	ENSSBOG00000032037	PUM1	100	99.306	Saimiri_boliviensis_boliviensis
ENSFDAG00000011319	PUM1	100	97.484	ENSSHAG00000010918	PUM1	100	97.397	Sarcophilus_harrisii
ENSFDAG00000011319	PUM1	100	80.817	ENSSMAG00000010918	pum1	100	90.777	Scophthalmus_maximus
ENSFDAG00000011319	PUM1	100	80.941	ENSSDUG00000009021	pum1	100	76.383	Seriola_dumerili
ENSFDAG00000011319	PUM1	100	80.941	ENSSLDG00000009667	pum1	100	78.468	Seriola_lalandi_dorsalis
ENSFDAG00000011319	PUM1	99	99.306	ENSSARG00000003055	PUM1	91	99.558	Sorex_araneus
ENSFDAG00000011319	PUM1	100	97.634	ENSSPUG00000006267	PUM1	100	96.888	Sphenodon_punctatus
ENSFDAG00000011319	PUM1	100	80.941	ENSSPAG00000016636	pum1	100	90.777	Stegastes_partitus
ENSFDAG00000011319	PUM1	100	99.306	ENSSSCG00000003591	PUM1	100	99.583	Sus_scrofa
ENSFDAG00000011319	PUM1	100	80.817	ENSTRUG00000013121	pum1	100	82.840	Takifugu_rubripes
ENSFDAG00000011319	PUM1	100	80.593	ENSTNIG00000016983	pum1	99	76.368	Tetraodon_nigroviridis
ENSFDAG00000011319	PUM1	87	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSFDAG00000011319	PUM1	92	98.906	ENSTTRG00000007436	PUM1	90	98.906	Tursiops_truncatus
ENSFDAG00000011319	PUM1	99	98.433	ENSUAMG00000018262	-	100	98.433	Ursus_americanus
ENSFDAG00000011319	PUM1	95	99.275	ENSUMAG00000009211	PUM1	100	99.270	Ursus_maritimus
ENSFDAG00000011319	PUM1	100	98.630	ENSVPAG00000005902	PUM1	92	99.322	Vicugna_pacos
ENSFDAG00000011319	PUM1	100	99.306	ENSVVUG00000014631	PUM1	100	99.270	Vulpes_vulpes
ENSFDAG00000011319	PUM1	100	88.323	ENSXETG00000012904	pum1	99	86.398	Xenopus_tropicalis
ENSFDAG00000011319	PUM1	100	80.569	ENSXMAG00000002945	pum1	100	77.640	Xiphophorus_maculatus