EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000011401 (Gene tree)
Gene ID: 104852344
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 10683 bases
Position: chrKN124473.1:245987-256669
Accession: 104852344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000001412	tRNA-synt_1g	PF09334.11	1.3e-11	1	1
ENSFDAP00000001412	Anticodon_1	PF08264.13	1.1e-22	1	1
ENSFDAP00000001412	tRNA-synt_1	PF00133.22	6.2e-203	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000015374	VARS-201	3093	XM_010609927	ENSFDAP00000001412	1030 (aa)	XP_010608229	-

Gene Model

Click here to download ENSFDAG00000011401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000011401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000011401	VARS	82	54.492	ENSFDAG00000017216	VARS2	79	54.472

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000011401	VARS	100	91.546	ENSG00000204394	VARS	99	82.822	Homo_sapiens
ENSFDAG00000011401	VARS	95	70.209	ENSAPOG00000020691	vars	80	70.319	Acanthochromis_polyacanthus
ENSFDAG00000011401	VARS	95	70.209	ENSAPOG00000020921	vars	80	70.319	Acanthochromis_polyacanthus
ENSFDAG00000011401	VARS	100	92.070	ENSAMEG00000006417	VARS	82	92.070	Ailuropoda_melanoleuca
ENSFDAG00000011401	VARS	100	71.429	ENSACIG00000013752	vars	82	71.808	Amphilophus_citrinellus
ENSFDAG00000011401	VARS	100	70.109	ENSAOCG00000002447	vars	83	70.219	Amphiprion_ocellaris
ENSFDAG00000011401	VARS	100	70.209	ENSAPEG00000010638	vars	83	70.319	Amphiprion_percula
ENSFDAG00000011401	VARS	100	69.121	ENSATEG00000020219	vars	82	70.370	Anabas_testudineus
ENSFDAG00000011401	VARS	94	73.887	ENSACAG00000029133	-	86	74.291	Anolis_carolinensis
ENSFDAG00000011401	VARS	100	91.856	ENSANAG00000015453	VARS	82	91.856	Aotus_nancymaae
ENSFDAG00000011401	VARS	100	69.299	ENSACLG00000025699	vars	80	69.664	Astatotilapia_calliptera
ENSFDAG00000011401	VARS	95	70.010	ENSAMXG00000017716	vars	78	70.010	Astyanax_mexicanus
ENSFDAG00000011401	VARS	100	92.062	ENSBTAG00000005631	VARS	82	92.062	Bos_taurus
ENSFDAG00000011401	VARS	100	92.165	ENSCJAG00000002604	VARS	82	92.165	Callithrix_jacchus
ENSFDAG00000011401	VARS	100	91.237	ENSCAFG00000000636	VARS	82	91.237	Canis_familiaris
ENSFDAG00000011401	VARS	94	91.340	ENSCAFG00020020790	VARS	79	91.340	Canis_lupus_dingo
ENSFDAG00000011401	VARS	100	92.165	ENSCHIG00000011008	VARS	82	92.165	Capra_hircus
ENSFDAG00000011401	VARS	100	91.856	ENSTSYG00000001567	VARS	82	91.856	Carlito_syrichta
ENSFDAG00000011401	VARS	98	91.736	ENSCAPG00000013736	VARS	88	91.736	Cavia_aperea
ENSFDAG00000011401	VARS	100	92.577	ENSCPOG00000000870	VARS	82	92.577	Cavia_porcellus
ENSFDAG00000011401	VARS	100	92.268	ENSCCAG00000035656	VARS	82	92.268	Cebus_capucinus
ENSFDAG00000011401	VARS	100	91.649	ENSCATG00000022394	VARS	82	91.649	Cercocebus_atys
ENSFDAG00000011401	VARS	97	92.500	ENSCLAG00000009470	VARS	81	92.500	Chinchilla_lanigera
ENSFDAG00000011401	VARS	100	91.856	ENSCSAG00000008784	VARS	82	91.856	Chlorocebus_sabaeus
ENSFDAG00000011401	VARS	81	80.824	ENSCPBG00000007943	VARS	84	80.824	Chrysemys_picta_bellii
ENSFDAG00000011401	VARS	100	92.165	ENSCANG00000033570	VARS	82	92.165	Colobus_angolensis_palliatus
ENSFDAG00000011401	VARS	100	89.163	ENSCGRG00001005686	Vars	85	89.163	Cricetulus_griseus_chok1gshd
ENSFDAG00000011401	VARS	99	83.685	ENSCGRG00000013352	Vars	71	83.685	Cricetulus_griseus_crigri
ENSFDAG00000011401	VARS	100	70.040	ENSCSEG00000019652	vars	83	70.547	Cynoglossus_semilaevis
ENSFDAG00000011401	VARS	100	70.594	ENSCVAG00000022398	vars	83	70.949	Cyprinodon_variegatus
ENSFDAG00000011401	VARS	100	70.452	ENSDARG00000044575	vars	83	70.000	Danio_rerio
ENSFDAG00000011401	VARS	88	89.922	ENSDORG00000016433	Vars	85	89.922	Dipodomys_ordii
ENSFDAG00000011401	VARS	75	86.594	ENSETEG00000003824	VARS	68	86.594	Echinops_telfairi
ENSFDAG00000011401	VARS	52	70.849	ENSEBUG00000007086	vars	70	69.094	Eptatretus_burgeri
ENSFDAG00000011401	VARS	57	70.566	ENSEBUG00000004637	vars	88	65.758	Eptatretus_burgeri
ENSFDAG00000011401	VARS	100	92.680	ENSEASG00005015673	VARS	82	92.680	Equus_asinus_asinus
ENSFDAG00000011401	VARS	100	91.967	ENSECAG00000014620	VARS	82	92.585	Equus_caballus
ENSFDAG00000011401	VARS	74	88.221	ENSEEUG00000004116	VARS	62	88.221	Erinaceus_europaeus
ENSFDAG00000011401	VARS	100	69.655	ENSELUG00000006550	vars	81	69.852	Esox_lucius
ENSFDAG00000011401	VARS	100	91.856	ENSFCAG00000004510	VARS	82	91.856	Felis_catus
ENSFDAG00000011401	VARS	100	70.198	ENSFHEG00000010672	vars	83	70.553	Fundulus_heteroclitus
ENSFDAG00000011401	VARS	100	69.162	ENSGMOG00000014908	vars	86	69.860	Gadus_morhua
ENSFDAG00000011401	VARS	100	70.734	ENSGAFG00000021630	vars	83	70.920	Gambusia_affinis
ENSFDAG00000011401	VARS	100	68.942	ENSGACG00000009601	vars	87	69.102	Gasterosteus_aculeatus
ENSFDAG00000011401	VARS	52	67.293	ENSGAGG00000006508	-	77	66.917	Gopherus_agassizii
ENSFDAG00000011401	VARS	100	91.546	ENSGGOG00000011364	VARS	82	91.546	Gorilla_gorilla
ENSFDAG00000011401	VARS	100	69.299	ENSHBUG00000017151	vars	80	69.664	Haplochromis_burtoni
ENSFDAG00000011401	VARS	100	92.577	ENSHGLG00000011646	VARS	82	92.784	Heterocephalus_glaber_female
ENSFDAG00000011401	VARS	100	86.885	ENSHGLG00100018062	VARS	85	86.885	Heterocephalus_glaber_male
ENSFDAG00000011401	VARS	99	69.238	ENSHCOG00000012198	vars	83	69.535	Hippocampus_comes
ENSFDAG00000011401	VARS	100	70.415	ENSIPUG00000005218	vars	84	70.289	Ictalurus_punctatus
ENSFDAG00000011401	VARS	100	93.100	ENSSTOG00000013112	VARS	82	93.100	Ictidomys_tridecemlineatus
ENSFDAG00000011401	VARS	99	76.082	ENSJJAG00000015343	-	85	76.082	Jaculus_jaculus
ENSFDAG00000011401	VARS	100	88.934	ENSJJAG00000019749	-	83	88.934	Jaculus_jaculus
ENSFDAG00000011401	VARS	100	69.478	ENSKMAG00000009455	vars	83	70.060	Kryptolebias_marmoratus
ENSFDAG00000011401	VARS	100	70.142	ENSLBEG00000010341	vars	83	69.929	Labrus_bergylta
ENSFDAG00000011401	VARS	94	66.030	ENSLACG00000015232	VARS	81	66.834	Latimeria_chalumnae
ENSFDAG00000011401	VARS	100	71.116	ENSLOCG00000004240	vars	84	71.443	Lepisosteus_oculatus
ENSFDAG00000011401	VARS	100	91.546	ENSLAFG00000023090	VARS	82	91.546	Loxodonta_africana
ENSFDAG00000011401	VARS	100	91.959	ENSMFAG00000001032	VARS	82	91.959	Macaca_fascicularis
ENSFDAG00000011401	VARS	100	91.959	ENSMMUG00000006828	VARS	82	91.959	Macaca_mulatta
ENSFDAG00000011401	VARS	100	91.959	ENSMNEG00000042072	VARS	82	91.959	Macaca_nemestrina
ENSFDAG00000011401	VARS	100	91.546	ENSMLEG00000039307	VARS	82	91.546	Mandrillus_leucophaeus
ENSFDAG00000011401	VARS	100	70.213	ENSMAMG00000003949	vars	83	69.821	Mastacembelus_armatus
ENSFDAG00000011401	VARS	100	69.299	ENSMZEG00005018327	vars	83	68.687	Maylandia_zebra
ENSFDAG00000011401	VARS	100	89.261	ENSMAUG00000006715	Vars	85	89.261	Mesocricetus_auratus
ENSFDAG00000011401	VARS	100	91.856	ENSMICG00000003548	VARS	82	91.856	Microcebus_murinus
ENSFDAG00000011401	VARS	100	86.885	ENSMOCG00000015404	Vars	82	87.386	Microtus_ochrogaster
ENSFDAG00000011401	VARS	100	69.548	ENSMMOG00000015801	vars	83	69.347	Mola_mola
ENSFDAG00000011401	VARS	100	83.744	ENSMODG00000015204	-	85	83.744	Monodelphis_domestica
ENSFDAG00000011401	VARS	99	70.564	ENSMALG00000022532	vars	82	70.884	Monopterus_albus
ENSFDAG00000011401	VARS	100	92.062	MGP_CAROLIEiJ_G0021491	Vars	82	92.062	Mus_caroli
ENSFDAG00000011401	VARS	100	92.062	ENSMUSG00000007029	Vars	82	92.062	Mus_musculus
ENSFDAG00000011401	VARS	100	91.856	MGP_PahariEiJ_G0020486	Vars	82	91.856	Mus_pahari
ENSFDAG00000011401	VARS	100	92.165	MGP_SPRETEiJ_G0022396	Vars	82	92.165	Mus_spretus
ENSFDAG00000011401	VARS	100	91.649	ENSMPUG00000010821	VARS	82	91.649	Mustela_putorius_furo
ENSFDAG00000011401	VARS	86	91.021	ENSMLUG00000013126	VARS	90	91.695	Myotis_lucifugus
ENSFDAG00000011401	VARS	100	92.268	ENSNGAG00000012151	Vars	82	92.680	Nannospalax_galili
ENSFDAG00000011401	VARS	100	69.003	ENSNBRG00000020520	vars	83	69.368	Neolamprologus_brichardi
ENSFDAG00000011401	VARS	100	91.237	ENSNLEG00000006351	VARS	82	91.237	Nomascus_leucogenys
ENSFDAG00000011401	VARS	100	82.577	ENSMEUG00000011378	VARS	82	82.577	Notamacropus_eugenii
ENSFDAG00000011401	VARS	100	92.680	ENSOPRG00000003607	VARS	82	92.680	Ochotona_princeps
ENSFDAG00000011401	VARS	100	93.918	ENSODEG00000017681	VARS	82	93.918	Octodon_degus
ENSFDAG00000011401	VARS	100	69.561	ENSONIG00000013064	vars	89	71.091	Oreochromis_niloticus
ENSFDAG00000011401	VARS	85	82.258	ENSOANG00000005400	VARS	91	81.720	Ornithorhynchus_anatinus
ENSFDAG00000011401	VARS	100	89.095	ENSOCUG00000022463	VARS	81	89.198	Oryctolagus_cuniculus
ENSFDAG00000011401	VARS	100	70.407	ENSORLG00000013063	vars	88	70.407	Oryzias_latipes
ENSFDAG00000011401	VARS	100	70.955	ENSORLG00020003504	vars	88	71.142	Oryzias_latipes_hni
ENSFDAG00000011401	VARS	100	71.013	ENSORLG00015009001	vars	88	71.100	Oryzias_latipes_hsok
ENSFDAG00000011401	VARS	100	71.156	ENSOMEG00000015016	vars	88	71.343	Oryzias_melastigma
ENSFDAG00000011401	VARS	100	90.619	ENSOGAG00000007515	VARS	82	90.619	Otolemur_garnettii
ENSFDAG00000011401	VARS	54	91.444	ENSOARG00000004625	-	82	91.444	Ovis_aries
ENSFDAG00000011401	VARS	100	91.753	ENSPPAG00000034012	VARS	82	91.753	Pan_paniscus
ENSFDAG00000011401	VARS	100	91.856	ENSPPRG00000014855	VARS	82	91.856	Panthera_pardus
ENSFDAG00000011401	VARS	94	91.856	ENSPTIG00000010462	VARS	84	91.856	Panthera_tigris_altaica
ENSFDAG00000011401	VARS	100	91.753	ENSPTRG00000017985	VARS	82	91.753	Pan_troglodytes
ENSFDAG00000011401	VARS	100	89.630	ENSPANG00000014565	VARS	82	89.630	Papio_anubis
ENSFDAG00000011401	VARS	100	69.100	ENSPKIG00000016304	vars	83	69.093	Paramormyrops_kingsleyae
ENSFDAG00000011401	VARS	100	71.241	ENSPMGG00000023909	vars	83	71.746	Periophthalmus_magnuspinnatus
ENSFDAG00000011401	VARS	100	89.852	ENSPEMG00000006639	Vars	85	89.852	Peromyscus_maniculatus_bairdii
ENSFDAG00000011401	VARS	100	86.186	ENSPCIG00000018553	VARS	82	86.186	Phascolarctos_cinereus
ENSFDAG00000011401	VARS	100	70.833	ENSPFOG00000015690	vars	83	71.019	Poecilia_formosa
ENSFDAG00000011401	VARS	100	71.227	ENSPLAG00000009590	vars	83	71.227	Poecilia_latipinna
ENSFDAG00000011401	VARS	100	70.833	ENSPMEG00000004708	vars	83	71.019	Poecilia_mexicana
ENSFDAG00000011401	VARS	100	68.580	ENSPREG00000013264	vars	82	68.580	Poecilia_reticulata
ENSFDAG00000011401	VARS	100	89.588	ENSPPYG00000016460	VARS	81	89.588	Pongo_abelii
ENSFDAG00000011401	VARS	82	87.402	ENSPCAG00000013565	VARS	67	91.111	Procavia_capensis
ENSFDAG00000011401	VARS	100	91.246	ENSPCOG00000010942	VARS	82	91.864	Propithecus_coquereli
ENSFDAG00000011401	VARS	100	85.025	ENSPVAG00000012403	VARS	84	85.025	Pteropus_vampyrus
ENSFDAG00000011401	VARS	100	69.299	ENSPNYG00000022511	vars	83	69.664	Pundamilia_nyererei
ENSFDAG00000011401	VARS	100	70.268	ENSPNAG00000020962	vars	87	71.156	Pygocentrus_nattereri
ENSFDAG00000011401	VARS	100	92.474	ENSRNOG00000000867	Vars	82	92.474	Rattus_norvegicus
ENSFDAG00000011401	VARS	100	91.959	ENSRBIG00000041669	VARS	82	91.959	Rhinopithecus_bieti
ENSFDAG00000011401	VARS	100	91.959	ENSRROG00000045490	VARS	82	91.959	Rhinopithecus_roxellana
ENSFDAG00000011401	VARS	100	91.959	ENSSBOG00000035402	VARS	82	91.959	Saimiri_boliviensis_boliviensis
ENSFDAG00000011401	VARS	99	85.120	ENSSHAG00000006937	VARS	81	85.120	Sarcophilus_harrisii
ENSFDAG00000011401	VARS	100	70.050	ENSSFOG00015014272	vars	83	70.140	Scleropages_formosus
ENSFDAG00000011401	VARS	100	68.670	ENSSMAG00000009596	vars	83	68.966	Scophthalmus_maximus
ENSFDAG00000011401	VARS	100	69.261	ENSSDUG00000014177	vars	83	69.625	Seriola_dumerili
ENSFDAG00000011401	VARS	100	69.458	ENSSLDG00000025316	vars	83	69.822	Seriola_lalandi_dorsalis
ENSFDAG00000011401	VARS	100	69.813	ENSSPAG00000017068	vars	83	70.688	Stegastes_partitus
ENSFDAG00000011401	VARS	100	91.040	ENSSSCG00000038950	VARS	82	91.658	Sus_scrofa
ENSFDAG00000011401	VARS	90	67.631	ENSTRUG00000012307	vars	88	67.588	Takifugu_rubripes
ENSFDAG00000011401	VARS	100	70.200	ENSTNIG00000008011	vars	87	69.733	Tetraodon_nigroviridis
ENSFDAG00000011401	VARS	55	95.506	ENSTBEG00000004728	-	50	95.506	Tupaia_belangeri
ENSFDAG00000011401	VARS	100	81.546	ENSTTRG00000014128	VARS	82	81.546	Tursiops_truncatus
ENSFDAG00000011401	VARS	100	87.335	ENSUAMG00000010424	VARS	82	87.411	Ursus_americanus
ENSFDAG00000011401	VARS	91	93.143	ENSUMAG00000013486	VARS	81	93.143	Ursus_maritimus
ENSFDAG00000011401	VARS	100	91.452	ENSVVUG00000021323	VARS	82	91.555	Vulpes_vulpes
ENSFDAG00000011401	VARS	100	64.976	ENSXETG00000024076	vars	90	64.751	Xenopus_tropicalis
ENSFDAG00000011401	VARS	100	70.695	ENSXCOG00000019172	vars	83	70.884	Xiphophorus_couchianus
ENSFDAG00000011401	VARS	100	70.536	ENSXMAG00000010927	vars	83	70.722	Xiphophorus_maculatus