EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000011855 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 1708 bases
Position: chrKN122834.1:5746512-5748219
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000002053	RRM_1	PF00076.22	3e-11	1	1
ENSFDAP00000002053	RRM_3	PF08777.11	4.4e-24	1	1
ENSFDAP00000002053	La	PF05383.17	2.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000015933	-	1653	-	ENSFDAP00000002053	550 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000011855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000011855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000011855	-	100	89.354	ENSFDAG00000014048	-	100	88.482

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000011855	-	100	78.902	ENSG00000174720	LARP7	100	84.034	Homo_sapiens
ENSFDAG00000011855	-	98	51.150	ENSAPOG00000014570	larp7	95	51.254	Acanthochromis_polyacanthus
ENSFDAG00000011855	-	100	77.148	ENSAMEG00000015642	LARP7	100	76.117	Ailuropoda_melanoleuca
ENSFDAG00000011855	-	98	49.910	ENSACIG00000023850	larp7	95	49.724	Amphilophus_citrinellus
ENSFDAG00000011855	-	95	50.995	ENSAOCG00000016160	larp7	95	51.971	Amphiprion_ocellaris
ENSFDAG00000011855	-	95	50.995	ENSAPEG00000021823	larp7	95	51.971	Amphiprion_percula
ENSFDAG00000011855	-	99	50.524	ENSATEG00000016238	larp7	95	50.811	Anabas_testudineus
ENSFDAG00000011855	-	99	63.529	ENSAPLG00000012887	LARP7	95	64.298	Anas_platyrhynchos
ENSFDAG00000011855	-	95	62.721	ENSACAG00000010662	LARP7	91	62.787	Anolis_carolinensis
ENSFDAG00000011855	-	100	63.511	ENSANAG00000022318	-	100	62.651	Aotus_nancymaae
ENSFDAG00000011855	-	100	76.884	ENSANAG00000031139	-	100	76.370	Aotus_nancymaae
ENSFDAG00000011855	-	99	50.000	ENSACLG00000023184	larp7	95	51.351	Astatotilapia_calliptera
ENSFDAG00000011855	-	99	49.652	ENSAMXG00000002549	larp7	95	49.737	Astyanax_mexicanus
ENSFDAG00000011855	-	100	76.897	ENSBTAG00000009632	LARP7	97	76.207	Bos_taurus
ENSFDAG00000011855	-	100	78.351	ENSCJAG00000003711	LARP7	100	77.835	Callithrix_jacchus
ENSFDAG00000011855	-	100	76.923	ENSCAFG00000011715	LARP7	100	76.410	Canis_familiaris
ENSFDAG00000011855	-	100	77.625	ENSCAFG00020017225	LARP7	100	77.108	Canis_lupus_dingo
ENSFDAG00000011855	-	100	64.148	ENSCHIG00000013971	-	90	77.358	Capra_hircus
ENSFDAG00000011855	-	100	75.559	ENSCHIG00000014163	-	100	74.699	Capra_hircus
ENSFDAG00000011855	-	95	72.051	ENSTSYG00000035188	-	98	72.051	Carlito_syrichta
ENSFDAG00000011855	-	93	78.716	ENSTSYG00000006769	-	100	77.982	Carlito_syrichta
ENSFDAG00000011855	-	100	72.949	ENSCAPG00000009328	LARP7	100	72.077	Cavia_aperea
ENSFDAG00000011855	-	100	81.250	ENSCPOG00000011830	LARP7	100	80.382	Cavia_porcellus
ENSFDAG00000011855	-	95	72.161	ENSCCAG00000023563	-	100	71.429	Cebus_capucinus
ENSFDAG00000011855	-	100	78.253	ENSCCAG00000026787	-	100	77.740	Cebus_capucinus
ENSFDAG00000011855	-	100	78.351	ENSCATG00000043535	LARP7	100	77.835	Cercocebus_atys
ENSFDAG00000011855	-	100	84.201	ENSCLAG00000005894	LARP7	100	83.333	Chinchilla_lanigera
ENSFDAG00000011855	-	100	78.522	ENSCSAG00000003810	LARP7	100	78.007	Chlorocebus_sabaeus
ENSFDAG00000011855	-	93	70.356	ENSCHOG00000008967	-	100	69.794	Choloepus_hoffmanni
ENSFDAG00000011855	-	100	76.950	ENSCHOG00000002379	-	100	76.430	Choloepus_hoffmanni
ENSFDAG00000011855	-	100	63.333	ENSCPBG00000004919	LARP7	97	65.794	Chrysemys_picta_bellii
ENSFDAG00000011855	-	100	77.873	ENSCANG00000031482	LARP7	99	77.358	Colobus_angolensis_palliatus
ENSFDAG00000011855	-	90	66.540	ENSCGRG00001012747	-	99	65.517	Cricetulus_griseus_chok1gshd
ENSFDAG00000011855	-	100	75.648	ENSCGRG00001025050	-	100	75.302	Cricetulus_griseus_chok1gshd
ENSFDAG00000011855	-	95	68.705	ENSCGRG00000001141	-	100	68.478	Cricetulus_griseus_crigri
ENSFDAG00000011855	-	95	66.966	ENSCGRG00000007642	-	99	66.365	Cricetulus_griseus_crigri
ENSFDAG00000011855	-	98	50.524	ENSCSEG00000009088	larp7	95	50.090	Cynoglossus_semilaevis
ENSFDAG00000011855	-	97	50.000	ENSCVAG00000016852	larp7	89	63.902	Cyprinodon_variegatus
ENSFDAG00000011855	-	99	49.212	ENSDARG00000017315	larp7	94	48.282	Danio_rerio
ENSFDAG00000011855	-	100	75.385	ENSDNOG00000013761	LARP7	96	77.281	Dasypus_novemcinctus
ENSFDAG00000011855	-	96	79.820	ENSDORG00000008896	-	96	78.919	Dipodomys_ordii
ENSFDAG00000011855	-	100	74.087	ENSETEG00000011692	LARP7	95	75.000	Echinops_telfairi
ENSFDAG00000011855	-	100	77.226	ENSEASG00005005592	LARP7	100	75.856	Equus_asinus_asinus
ENSFDAG00000011855	-	100	77.568	ENSECAG00000000834	LARP7	100	76.199	Equus_caballus
ENSFDAG00000011855	-	95	74.094	ENSEEUG00000012824	LARP7	100	73.551	Erinaceus_europaeus
ENSFDAG00000011855	-	98	51.220	ENSELUG00000015341	larp7	95	50.903	Esox_lucius
ENSFDAG00000011855	-	100	77.702	ENSFCAG00000031966	LARP7	100	76.976	Felis_catus
ENSFDAG00000011855	-	99	64.646	ENSFALG00000000972	LARP7	93	65.141	Ficedula_albicollis
ENSFDAG00000011855	-	99	49.824	ENSFHEG00000021652	larp7	99	50.000	Fundulus_heteroclitus
ENSFDAG00000011855	-	99	63.758	ENSGALG00000012048	LARP7	95	64.912	Gallus_gallus
ENSFDAG00000011855	-	99	50.702	ENSGAFG00000015400	larp7	95	50.730	Gambusia_affinis
ENSFDAG00000011855	-	99	47.099	ENSGACG00000019618	larp7	96	46.454	Gasterosteus_aculeatus
ENSFDAG00000011855	-	96	63.700	ENSGAGG00000024520	LARP7	95	65.679	Gopherus_agassizii
ENSFDAG00000011855	-	87	76.634	ENSGGOG00000006438	-	97	76.877	Gorilla_gorilla
ENSFDAG00000011855	-	100	78.731	ENSGGOG00000023567	-	100	78.216	Gorilla_gorilla
ENSFDAG00000011855	-	99	50.172	ENSHBUG00000019223	larp7	95	51.351	Haplochromis_burtoni
ENSFDAG00000011855	-	100	86.010	ENSHGLG00000002716	LARP7	100	85.147	Heterocephalus_glaber_female
ENSFDAG00000011855	-	100	86.010	ENSHGLG00100000332	LARP7	100	85.147	Heterocephalus_glaber_male
ENSFDAG00000011855	-	98	48.474	ENSHCOG00000000664	LARP7	96	48.624	Hippocampus_comes
ENSFDAG00000011855	-	98	49.147	ENSIPUG00000019886	larp7	95	47.469	Ictalurus_punctatus
ENSFDAG00000011855	-	100	79.138	ENSSTOG00000011789	LARP7	100	78.793	Ictidomys_tridecemlineatus
ENSFDAG00000011855	-	100	76.248	ENSJJAG00000000257	-	96	76.259	Jaculus_jaculus
ENSFDAG00000011855	-	97	48.468	ENSKMAG00000005057	larp7	95	49.002	Kryptolebias_marmoratus
ENSFDAG00000011855	-	98	48.696	ENSLBEG00000020062	larp7	95	48.370	Labrus_bergylta
ENSFDAG00000011855	-	99	54.424	ENSLACG00000013744	LARP7	95	56.627	Latimeria_chalumnae
ENSFDAG00000011855	-	95	47.251	ENSLOCG00000011608	larp7	95	46.655	Lepisosteus_oculatus
ENSFDAG00000011855	-	100	78.731	ENSLAFG00000015769	LARP7	100	77.873	Loxodonta_africana
ENSFDAG00000011855	-	100	78.522	ENSMFAG00000036506	LARP7	100	78.007	Macaca_fascicularis
ENSFDAG00000011855	-	100	78.522	ENSMMUG00000017911	LARP7	100	78.007	Macaca_mulatta
ENSFDAG00000011855	-	100	78.522	ENSMNEG00000034758	LARP7	100	78.007	Macaca_nemestrina
ENSFDAG00000011855	-	100	78.522	ENSMLEG00000026154	LARP7	100	78.007	Mandrillus_leucophaeus
ENSFDAG00000011855	-	97	50.177	ENSMAMG00000005835	larp7	95	50.090	Mastacembelus_armatus
ENSFDAG00000011855	-	99	50.000	ENSMZEG00005002084	larp7	95	51.351	Maylandia_zebra
ENSFDAG00000011855	-	99	63.898	ENSMGAG00000010947	LARP7	95	65.071	Meleagris_gallopavo
ENSFDAG00000011855	-	99	61.379	ENSMAUG00000005625	-	99	61.034	Mesocricetus_auratus
ENSFDAG00000011855	-	100	80.551	ENSMICG00000031035	LARP7	100	79.690	Microcebus_murinus
ENSFDAG00000011855	-	100	75.347	ENSMOCG00000012519	-	100	75.347	Microtus_ochrogaster
ENSFDAG00000011855	-	89	71.984	ENSMOCG00000015761	-	100	71.595	Microtus_ochrogaster
ENSFDAG00000011855	-	99	68.971	ENSMODG00000005669	LARP7	100	67.454	Monodelphis_domestica
ENSFDAG00000011855	-	100	75.130	MGP_CAROLIEiJ_G0025613	-	100	75.130	Mus_caroli
ENSFDAG00000011855	-	95	75.407	ENSMUSG00000027968	Larp7	100	74.611	Mus_musculus
ENSFDAG00000011855	-	100	74.913	MGP_PahariEiJ_G0027060	-	100	74.913	Mus_pahari
ENSFDAG00000011855	-	100	75.000	MGP_SPRETEiJ_G0026566	Larp7	100	75.000	Mus_spretus
ENSFDAG00000011855	-	95	73.234	ENSMPUG00000018052	-	100	73.048	Mustela_putorius_furo
ENSFDAG00000011855	-	100	76.420	ENSMPUG00000008331	-	100	75.043	Mustela_putorius_furo
ENSFDAG00000011855	-	86	69.384	ENSMLUG00000027214	LARP7	100	69.185	Myotis_lucifugus
ENSFDAG00000011855	-	100	73.711	ENSNGAG00000007368	-	96	74.194	Nannospalax_galili
ENSFDAG00000011855	-	100	78.866	ENSNLEG00000016354	LARP7	99	78.351	Nomascus_leucogenys
ENSFDAG00000011855	-	87	67.059	ENSMEUG00000004739	LARP7	100	66.863	Notamacropus_eugenii
ENSFDAG00000011855	-	88	81.203	ENSOPRG00000009594	-	88	81.203	Ochotona_princeps
ENSFDAG00000011855	-	96	80.616	ENSODEG00000011121	LARP7	98	79.891	Octodon_degus
ENSFDAG00000011855	-	95	49.378	ENSONIG00000008763	larp7	95	51.254	Oreochromis_niloticus
ENSFDAG00000011855	-	99	70.707	ENSOANG00000009298	LARP7	99	69.529	Ornithorhynchus_anatinus
ENSFDAG00000011855	-	100	77.108	ENSOCUG00000007073	LARP7	100	75.904	Oryctolagus_cuniculus
ENSFDAG00000011855	-	95	48.727	ENSORLG00000004978	larp7	94	50.183	Oryzias_latipes
ENSFDAG00000011855	-	95	48.909	ENSORLG00020013825	larp7	94	50.366	Oryzias_latipes_hni
ENSFDAG00000011855	-	99	48.421	ENSOMEG00000006920	larp7	95	50.730	Oryzias_melastigma
ENSFDAG00000011855	-	100	78.291	ENSOGAG00000001643	LARP7	100	77.265	Otolemur_garnettii
ENSFDAG00000011855	-	100	75.685	ENSOARG00000001809	LARP7	100	74.829	Ovis_aries
ENSFDAG00000011855	-	100	78.731	ENSPPAG00000038420	LARP7	99	78.216	Pan_paniscus
ENSFDAG00000011855	-	100	77.873	ENSPPRG00000023256	LARP7	100	77.015	Panthera_pardus
ENSFDAG00000011855	-	96	76.250	ENSPTIG00000021146	LARP7	97	75.850	Panthera_tigris_altaica
ENSFDAG00000011855	-	100	78.902	ENSPTRG00000016380	LARP7	100	78.388	Pan_troglodytes
ENSFDAG00000011855	-	100	78.559	ENSPANG00000006701	LARP7	99	78.045	Papio_anubis
ENSFDAG00000011855	-	98	54.737	ENSPKIG00000023484	larp7	94	53.610	Paramormyrops_kingsleyae
ENSFDAG00000011855	-	98	64.666	ENSPSIG00000014419	LARP7	94	65.248	Pelodiscus_sinensis
ENSFDAG00000011855	-	100	74.363	ENSPEMG00000013978	-	100	74.446	Peromyscus_maniculatus_bairdii
ENSFDAG00000011855	-	100	32.290	ENSPMAG00000005362	larp7	93	32.852	Petromyzon_marinus
ENSFDAG00000011855	-	100	68.342	ENSPCIG00000020284	LARP7	98	74.359	Phascolarctos_cinereus
ENSFDAG00000011855	-	99	50.433	ENSPFOG00000000265	larp7	95	51.171	Poecilia_formosa
ENSFDAG00000011855	-	99	50.433	ENSPLAG00000012181	larp7	95	51.171	Poecilia_latipinna
ENSFDAG00000011855	-	99	50.433	ENSPMEG00000007182	larp7	95	51.171	Poecilia_mexicana
ENSFDAG00000011855	-	97	50.704	ENSPREG00000019513	larp7	95	50.455	Poecilia_reticulata
ENSFDAG00000011855	-	100	78.216	ENSPPYG00000015010	LARP7	100	77.702	Pongo_abelii
ENSFDAG00000011855	-	57	88.462	ENSPCAG00000003373	-	68	88.462	Procavia_capensis
ENSFDAG00000011855	-	79	82.000	ENSPCOG00000023946	LARP7	90	82.000	Propithecus_coquereli
ENSFDAG00000011855	-	100	75.258	ENSPVAG00000000282	LARP7	100	74.570	Pteropus_vampyrus
ENSFDAG00000011855	-	99	47.218	ENSPNAG00000017554	larp7	95	48.649	Pygocentrus_nattereri
ENSFDAG00000011855	-	100	73.448	ENSRNOG00000048989	Larp7	100	73.448	Rattus_norvegicus
ENSFDAG00000011855	-	85	88.889	ENSRBIG00000031916	LARP7	99	88.889	Rhinopithecus_bieti
ENSFDAG00000011855	-	100	78.179	ENSRROG00000033414	LARP7	100	77.663	Rhinopithecus_roxellana
ENSFDAG00000011855	-	96	79.354	ENSSBOG00000030886	-	95	78.815	Saimiri_boliviensis_boliviensis
ENSFDAG00000011855	-	96	59.783	ENSSBOG00000022652	-	95	59.239	Saimiri_boliviensis_boliviensis
ENSFDAG00000011855	-	100	67.677	ENSSHAG00000008153	LARP7	100	66.835	Sarcophilus_harrisii
ENSFDAG00000011855	-	99	52.000	ENSSFOG00015019344	larp7	95	51.342	Scleropages_formosus
ENSFDAG00000011855	-	95	50.366	ENSSMAG00000011296	larp7	95	50.549	Scophthalmus_maximus
ENSFDAG00000011855	-	98	50.353	ENSSDUG00000007045	larp7	95	50.090	Seriola_dumerili
ENSFDAG00000011855	-	52	66.225	ENSSARG00000000190	-	97	66.555	Sorex_araneus
ENSFDAG00000011855	-	99	49.828	ENSSPAG00000016066	larp7	95	50.543	Stegastes_partitus
ENSFDAG00000011855	-	96	78.276	ENSSSCG00000009119	LARP7	95	77.558	Sus_scrofa
ENSFDAG00000011855	-	99	64.020	ENSTGUG00000001804	LARP7	95	64.488	Taeniopygia_guttata
ENSFDAG00000011855	-	97	46.824	ENSTRUG00000004996	larp7	96	47.794	Takifugu_rubripes
ENSFDAG00000011855	-	99	43.684	ENSTNIG00000007183	larp7	95	43.659	Tetraodon_nigroviridis
ENSFDAG00000011855	-	96	74.014	ENSTBEG00000009188	LARP7	95	73.477	Tupaia_belangeri
ENSFDAG00000011855	-	90	76.718	ENSTTRG00000005233	LARP7	100	76.718	Tursiops_truncatus
ENSFDAG00000011855	-	100	76.158	ENSUAMG00000000836	LARP7	100	75.643	Ursus_americanus
ENSFDAG00000011855	-	99	75.478	ENSUMAG00000002263	LARP7	98	74.957	Ursus_maritimus
ENSFDAG00000011855	-	100	78.253	ENSVPAG00000010502	LARP7	100	77.740	Vicugna_pacos
ENSFDAG00000011855	-	100	77.969	ENSVVUG00000002274	LARP7	100	77.453	Vulpes_vulpes
ENSFDAG00000011855	-	98	56.314	ENSXETG00000024097	larp7	95	57.093	Xenopus_tropicalis
ENSFDAG00000011855	-	97	50.717	ENSXCOG00000004883	larp7	84	64.481	Xiphophorus_couchianus
ENSFDAG00000011855	-	99	50.264	ENSXMAG00000008479	larp7	95	50.273	Xiphophorus_maculatus