EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000011856 (Gene tree)
Gene ID: 104866506
Gene Symbol: PLEC
Alias: EBS1|PCN|PLEC1|PLTN
Full Name: plectin
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 64852 bases
Position: chrKN122397.1:6452643-6517494
Accession: 104866506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000002008	S10_plectin	PF03501.15	4.7e-36	1	1
ENSFDAP00000002012	S10_plectin	PF03501.15	4.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000028667	PLEC-209	14888	XM_010630587	ENSFDAP00000001986	4544 (aa)	XP_010628889	UPI00053F81C0
ENSFDAT00000015916	PLEC-207	14772	XM_010630589	ENSFDAP00000002031	4535 (aa)	XP_010628891	-
ENSFDAT00000015900	PLEC-205	15299	XM_010630574	ENSFDAP00000002012	4691 (aa)	XP_010628876	UPI00053F857D
ENSFDAT00000015901	PLEC-206	15335	-	ENSFDAP00000002010	4387 (aa)	-	-
ENSFDAT00000015922	PLEC-208	14954	XM_010630579	ENSFDAP00000002037	4588 (aa)	XP_010628881	UPI00053F4997
ENSFDAT00000015890	PLEC-202	14898	XM_010630582	ENSFDAP00000001995	4549 (aa)	XP_010628884	UPI0005401E85
ENSFDAT00000028673	PLEC-210	13569	XM_010630596	ENSFDAP00000002025	4522 (aa)	XP_010628898	-
ENSFDAT00000015895	PLEC-203	15283	XM_010630575	ENSFDAP00000002008	4686 (aa)	XP_010628877	UPI00053F8EC8
ENSFDAT00000015898	PLEC-204	13539	-	ENSFDAP00000002002	4512 (aa)	-	-
ENSFDAT00000015889	PLEC-201	14813	XM_010630584	ENSFDAP00000001991	4549 (aa)	XP_010628886	-

Gene Model

Click here to download ENSFDAG00000011856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000011856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000011856	PLEC	100	93.261	ENSG00000178209	PLEC	100	100.000	Homo_sapiens
ENSFDAG00000011856	PLEC	100	92.854	ENSANAG00000032431	PLEC	100	92.854	Aotus_nancymaae
ENSFDAG00000011856	PLEC	100	91.933	ENSBTAG00000011922	PLEC	100	91.933	Bos_taurus
ENSFDAG00000011856	PLEC	100	93.259	ENSCJAG00000021472	PLEC	100	93.259	Callithrix_jacchus
ENSFDAG00000011856	PLEC	100	91.835	ENSCAFG00000001433	PLEC	100	91.835	Canis_familiaris
ENSFDAG00000011856	PLEC	88	92.893	ENSCHIG00000022260	PLEC	99	92.893	Capra_hircus
ENSFDAG00000011856	PLEC	100	93.794	ENSTSYG00000033419	PLEC	100	93.794	Carlito_syrichta
ENSFDAG00000011856	PLEC	100	96.674	ENSCPOG00000007957	PLEC	100	96.674	Cavia_porcellus
ENSFDAG00000011856	PLEC	100	93.281	ENSCCAG00000031237	PLEC	100	93.281	Cebus_capucinus
ENSFDAG00000011856	PLEC	100	93.687	ENSCATG00000009349	PLEC	100	93.687	Cercocebus_atys
ENSFDAG00000011856	PLEC	100	96.994	ENSCLAG00000012830	PLEC	100	96.994	Chinchilla_lanigera
ENSFDAG00000011856	PLEC	100	75.126	ENSCPBG00000021974	PLEC	99	74.108	Chrysemys_picta_bellii
ENSFDAG00000011856	PLEC	100	94.544	ENSCGRG00001019864	Plec	100	94.544	Cricetulus_griseus_chok1gshd
ENSFDAG00000011856	PLEC	100	93.815	ENSCGRG00000002714	Plec	100	93.815	Cricetulus_griseus_crigri
ENSFDAG00000011856	PLEC	96	91.382	ENSDNOG00000031742	PLEC	99	91.382	Dasypus_novemcinctus
ENSFDAG00000011856	PLEC	79	93.694	ENSETEG00000015535	-	62	93.694	Echinops_telfairi
ENSFDAG00000011856	PLEC	85	96.024	ENSEEUG00000004554	-	67	96.330	Erinaceus_europaeus
ENSFDAG00000011856	PLEC	100	92.125	ENSFCAG00000042897	PLEC	100	92.125	Felis_catus
ENSFDAG00000011856	PLEC	100	88.325	ENSGGOG00000012217	PLEC	100	91.638	Gorilla_gorilla
ENSFDAG00000011856	PLEC	100	97.909	ENSHGLG00000012646	PLEC	100	97.909	Heterocephalus_glaber_female
ENSFDAG00000011856	PLEC	100	85.781	ENSHGLG00100011759	PLEC	100	85.677	Heterocephalus_glaber_male
ENSFDAG00000011856	PLEC	100	93.446	ENSSTOG00000023061	PLEC	100	93.446	Ictidomys_tridecemlineatus
ENSFDAG00000011856	PLEC	100	94.135	ENSJJAG00000012390	Plec	100	94.157	Jaculus_jaculus
ENSFDAG00000011856	PLEC	100	93.645	ENSMFAG00000032066	PLEC	100	93.645	Macaca_fascicularis
ENSFDAG00000011856	PLEC	100	90.017	ENSMMUG00000000388	PLEC	100	90.421	Macaca_mulatta
ENSFDAG00000011856	PLEC	100	93.651	ENSMNEG00000011406	PLEC	100	93.645	Macaca_nemestrina
ENSFDAG00000011856	PLEC	97	89.950	ENSMLEG00000033296	PLEC	100	93.281	Mandrillus_leucophaeus
ENSFDAG00000011856	PLEC	100	94.352	ENSMAUG00000001116	Plec	100	94.352	Mesocricetus_auratus
ENSFDAG00000011856	PLEC	100	93.647	ENSMICG00000016160	PLEC	100	93.647	Microcebus_murinus
ENSFDAG00000011856	PLEC	100	94.501	ENSMOCG00000000674	Plec	100	94.501	Microtus_ochrogaster
ENSFDAG00000011856	PLEC	100	94.416	MGP_CAROLIEiJ_G0019913	Plec	100	95.436	Mus_caroli
ENSFDAG00000011856	PLEC	100	94.373	ENSMUSG00000022565	Plec	100	95.643	Mus_musculus
ENSFDAG00000011856	PLEC	100	94.331	MGP_PahariEiJ_G0019923	Plec	100	95.643	Mus_pahari
ENSFDAG00000011856	PLEC	100	94.437	MGP_SPRETEiJ_G0020816	Plec	100	95.539	Mus_spretus
ENSFDAG00000011856	PLEC	100	90.205	ENSMPUG00000007329	PLEC	100	90.290	Mustela_putorius_furo
ENSFDAG00000011856	PLEC	100	94.714	ENSNGAG00000008931	Plec	100	94.714	Nannospalax_galili
ENSFDAG00000011856	PLEC	99	93.033	ENSMEUG00000004499	-	70	93.033	Notamacropus_eugenii
ENSFDAG00000011856	PLEC	91	92.085	ENSOPRG00000015206	PLEC	69	92.085	Ochotona_princeps
ENSFDAG00000011856	PLEC	98	77.252	ENSOARG00000015846	-	100	73.755	Ovis_aries
ENSFDAG00000011856	PLEC	100	85.166	ENSPPAG00000042112	PLEC	100	85.894	Pan_paniscus
ENSFDAG00000011856	PLEC	100	93.325	ENSPTRG00000020672	PLEC	100	93.325	Pan_troglodytes
ENSFDAG00000011856	PLEC	100	93.517	ENSPANG00000023403	-	100	93.517	Papio_anubis
ENSFDAG00000011856	PLEC	100	94.699	ENSPEMG00000011922	Plec	100	94.720	Peromyscus_maniculatus_bairdii
ENSFDAG00000011856	PLEC	100	82.835	ENSPCIG00000014981	PLEC	99	83.397	Phascolarctos_cinereus
ENSFDAG00000011856	PLEC	100	93.581	ENSPCOG00000023279	PLEC	100	93.581	Propithecus_coquereli
ENSFDAG00000011856	PLEC	100	92.261	ENSPVAG00000009376	PLEC	91	92.483	Pteropus_vampyrus
ENSFDAG00000011856	PLEC	100	94.369	ENSRNOG00000023781	Plec	100	94.369	Rattus_norvegicus
ENSFDAG00000011856	PLEC	100	84.962	ENSRBIG00000041068	PLEC	61	84.010	Rhinopithecus_bieti
ENSFDAG00000011856	PLEC	100	93.541	ENSRROG00000015881	PLEC	100	93.541	Rhinopithecus_roxellana
ENSFDAG00000011856	PLEC	100	90.936	ENSSBOG00000025259	PLEC	100	90.936	Saimiri_boliviensis_boliviensis
ENSFDAG00000011856	PLEC	99	77.241	ENSSHAG00000009020	PLEC	99	80.525	Sarcophilus_harrisii
ENSFDAG00000011856	PLEC	97	89.392	ENSTTRG00000010427	PLEC	95	89.392	Tursiops_truncatus
ENSFDAG00000011856	PLEC	100	91.388	ENSVVUG00000010214	PLEC	100	91.388	Vulpes_vulpes