EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000012078 (Gene tree)
Gene ID: 104860765
Gene Symbol: RBPMS
Alias: HERMES
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 89485 bases
Position: chrKN120606.1:4218211-4307695
Accession: 104860765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000002369	RRM_1	PF00076.22	6.7e-12	1	1
ENSFDAP00000002341	RRM_1	PF00076.22	7.4e-12	1	1
ENSFDAP00000002346	RRM_1	PF00076.22	8.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000016170	RBPMS-201	510	-	ENSFDAP00000002369	169 (aa)	-	-
ENSFDAT00000028728	RBPMS-203	594	XM_010622002	ENSFDAP00000002346	197 (aa)	XP_010620304	UPI0001FA00D5
ENSFDAT00000016175	RBPMS-202	1848	XM_010622008	ENSFDAP00000002341	174 (aa)	XP_010620310	UPI000C71D658

Gene Model

Click here to download ENSFDAG00000012078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012078's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000012078	RBPMS	100	73.184	ENSFDAG00000016154	RBPMS2	100	74.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012078	RBPMS	100	100.000	ENSG00000157110	RBPMS	100	100.000	Homo_sapiens
ENSFDAG00000012078	RBPMS	100	87.931	ENSAPOG00000022304	RBPMS	89	87.931	Acanthochromis_polyacanthus
ENSFDAG00000012078	RBPMS	100	99.492	ENSAMEG00000001522	RBPMS	90	99.492	Ailuropoda_melanoleuca
ENSFDAG00000012078	RBPMS	67	89.381	ENSACIG00000011395	RBPMS	61	89.381	Amphilophus_citrinellus
ENSFDAG00000012078	RBPMS	100	87.931	ENSAOCG00000007731	RBPMS	89	87.931	Amphiprion_ocellaris
ENSFDAG00000012078	RBPMS	100	87.931	ENSAPEG00000023543	RBPMS	89	87.931	Amphiprion_percula
ENSFDAG00000012078	RBPMS	100	87.931	ENSATEG00000018184	RBPMS	89	87.931	Anabas_testudineus
ENSFDAG00000012078	RBPMS	100	98.286	ENSACAG00000003012	RBPMS	89	98.286	Anolis_carolinensis
ENSFDAG00000012078	RBPMS	100	100.000	ENSANAG00000028150	RBPMS	90	99.492	Aotus_nancymaae
ENSFDAG00000012078	RBPMS	100	87.931	ENSACLG00000002926	RBPMS	89	87.931	Astatotilapia_calliptera
ENSFDAG00000012078	RBPMS	100	86.782	ENSAMXG00000033491	rbpms	90	86.782	Astyanax_mexicanus
ENSFDAG00000012078	RBPMS	100	99.425	ENSBTAG00000033727	RBPMS	90	98.985	Bos_taurus
ENSFDAG00000012078	RBPMS	100	100.000	ENSCJAG00000012366	RBPMS	89	100.000	Callithrix_jacchus
ENSFDAG00000012078	RBPMS	100	99.492	ENSCAFG00000006503	RBPMS	90	99.492	Canis_familiaris
ENSFDAG00000012078	RBPMS	100	99.492	ENSCAFG00020001031	RBPMS	90	99.492	Canis_lupus_dingo
ENSFDAG00000012078	RBPMS	100	92.571	ENSCHIG00000027156	RBPMS	89	92.571	Capra_hircus
ENSFDAG00000012078	RBPMS	65	100.000	ENSTSYG00000013982	RBPMS	83	100.000	Carlito_syrichta
ENSFDAG00000012078	RBPMS	100	100.000	ENSCPOG00000038597	RBPMS	90	99.492	Cavia_porcellus
ENSFDAG00000012078	RBPMS	100	100.000	ENSCCAG00000033226	RBPMS	89	100.000	Cebus_capucinus
ENSFDAG00000012078	RBPMS	100	100.000	ENSCATG00000036486	RBPMS	90	99.492	Cercocebus_atys
ENSFDAG00000012078	RBPMS	100	100.000	ENSCLAG00000001518	RBPMS	100	100.000	Chinchilla_lanigera
ENSFDAG00000012078	RBPMS	100	99.492	ENSCSAG00000015838	RBPMS	90	99.492	Chlorocebus_sabaeus
ENSFDAG00000012078	RBPMS	100	100.000	ENSCHOG00000008745	RBPMS	100	100.000	Choloepus_hoffmanni
ENSFDAG00000012078	RBPMS	100	97.126	ENSCPBG00000013437	RBPMS	89	97.126	Chrysemys_picta_bellii
ENSFDAG00000012078	RBPMS	100	100.000	ENSCANG00000034997	RBPMS	100	100.000	Colobus_angolensis_palliatus
ENSFDAG00000012078	RBPMS	100	99.429	ENSCGRG00001002814	Rbpms	90	98.990	Cricetulus_griseus_chok1gshd
ENSFDAG00000012078	RBPMS	100	99.429	ENSCGRG00000006095	Rbpms	100	99.429	Cricetulus_griseus_crigri
ENSFDAG00000012078	RBPMS	100	87.931	ENSCSEG00000002777	rbpms	95	87.931	Cynoglossus_semilaevis
ENSFDAG00000012078	RBPMS	100	87.931	ENSCVAG00000013975	RBPMS	89	87.931	Cyprinodon_variegatus
ENSFDAG00000012078	RBPMS	98	67.647	ENSDARG00000099396	rbpms	100	67.647	Danio_rerio
ENSFDAG00000012078	RBPMS	100	98.477	ENSDNOG00000008126	RBPMS	90	98.477	Dasypus_novemcinctus
ENSFDAG00000012078	RBPMS	100	98.477	ENSETEG00000017582	RBPMS	90	98.477	Echinops_telfairi
ENSFDAG00000012078	RBPMS	100	99.492	ENSEASG00005016962	RBPMS	99	99.492	Equus_asinus_asinus
ENSFDAG00000012078	RBPMS	100	99.492	ENSECAG00000020735	RBPMS	99	99.492	Equus_caballus
ENSFDAG00000012078	RBPMS	100	86.207	ENSELUG00000009787	rbpms	89	86.207	Esox_lucius
ENSFDAG00000012078	RBPMS	100	100.000	ENSFCAG00000025639	-	90	99.492	Felis_catus
ENSFDAG00000012078	RBPMS	99	54.651	ENSFCAG00000022292	-	80	54.651	Felis_catus
ENSFDAG00000012078	RBPMS	100	87.931	ENSFHEG00000000618	rbpms	89	87.931	Fundulus_heteroclitus
ENSFDAG00000012078	RBPMS	74	56.589	ENSGMOG00000009646	-	86	56.589	Gadus_morhua
ENSFDAG00000012078	RBPMS	100	87.931	ENSGAFG00000016566	RBPMS	89	87.931	Gambusia_affinis
ENSFDAG00000012078	RBPMS	100	78.736	ENSGACG00000019471	rbpms	89	78.736	Gasterosteus_aculeatus
ENSFDAG00000012078	RBPMS	64	97.248	ENSGAGG00000023634	RBPMS	53	90.244	Gopherus_agassizii
ENSFDAG00000012078	RBPMS	100	87.931	ENSHBUG00000005888	RBPMS	89	87.931	Haplochromis_burtoni
ENSFDAG00000012078	RBPMS	100	100.000	ENSHGLG00000002303	RBPMS	90	99.492	Heterocephalus_glaber_female
ENSFDAG00000012078	RBPMS	100	100.000	ENSHGLG00100008787	RBPMS	100	100.000	Heterocephalus_glaber_male
ENSFDAG00000012078	RBPMS	100	87.356	ENSHCOG00000005774	rbpms	90	87.356	Hippocampus_comes
ENSFDAG00000012078	RBPMS	100	83.333	ENSIPUG00000012459	RBPMS	90	83.333	Ictalurus_punctatus
ENSFDAG00000012078	RBPMS	100	100.000	ENSSTOG00000026546	RBPMS	90	99.492	Ictidomys_tridecemlineatus
ENSFDAG00000012078	RBPMS	100	99.425	ENSJJAG00000014024	Rbpms	90	98.985	Jaculus_jaculus
ENSFDAG00000012078	RBPMS	100	70.115	ENSKMAG00000006377	RBPMS	88	71.186	Kryptolebias_marmoratus
ENSFDAG00000012078	RBPMS	100	87.931	ENSLBEG00000027989	RBPMS	97	87.931	Labrus_bergylta
ENSFDAG00000012078	RBPMS	100	88.506	ENSLOCG00000013199	RBPMS	96	88.506	Lepisosteus_oculatus
ENSFDAG00000012078	RBPMS	100	99.492	ENSLAFG00000000209	RBPMS	90	99.492	Loxodonta_africana
ENSFDAG00000012078	RBPMS	100	100.000	ENSMFAG00000036911	RBPMS	90	99.492	Macaca_fascicularis
ENSFDAG00000012078	RBPMS	100	100.000	ENSMMUG00000000458	RBPMS	90	99.492	Macaca_mulatta
ENSFDAG00000012078	RBPMS	100	100.000	ENSMNEG00000043805	RBPMS	90	99.492	Macaca_nemestrina
ENSFDAG00000012078	RBPMS	100	100.000	ENSMLEG00000015635	RBPMS	100	100.000	Mandrillus_leucophaeus
ENSFDAG00000012078	RBPMS	91	69.620	ENSMAMG00000004604	RBPMS	81	69.620	Mastacembelus_armatus
ENSFDAG00000012078	RBPMS	100	87.931	ENSMZEG00005000698	RBPMS	97	87.931	Maylandia_zebra
ENSFDAG00000012078	RBPMS	100	97.126	ENSMGAG00000005088	RBPMS	89	97.126	Meleagris_gallopavo
ENSFDAG00000012078	RBPMS	100	99.429	ENSMAUG00000018892	Rbpms	90	98.990	Mesocricetus_auratus
ENSFDAG00000012078	RBPMS	100	99.425	ENSMICG00000001295	RBPMS	90	98.985	Microcebus_murinus
ENSFDAG00000012078	RBPMS	100	99.429	ENSMOCG00000014009	Rbpms	90	98.990	Microtus_ochrogaster
ENSFDAG00000012078	RBPMS	91	86.792	ENSMMOG00000012036	RBPMS	67	86.792	Mola_mola
ENSFDAG00000012078	RBPMS	100	98.276	ENSMODG00000019006	RBPMS	82	98.276	Monodelphis_domestica
ENSFDAG00000012078	RBPMS	100	86.782	ENSMALG00000003261	RBPMS	92	86.782	Monopterus_albus
ENSFDAG00000012078	RBPMS	100	98.990	MGP_CAROLIEiJ_G0030970	Rbpms	90	98.990	Mus_caroli
ENSFDAG00000012078	RBPMS	100	98.990	ENSMUSG00000031586	Rbpms	90	98.990	Mus_musculus
ENSFDAG00000012078	RBPMS	100	98.990	MGP_PahariEiJ_G0021439	Rbpms	91	98.990	Mus_pahari
ENSFDAG00000012078	RBPMS	100	98.990	MGP_SPRETEiJ_G0032087	Rbpms	90	98.990	Mus_spretus
ENSFDAG00000012078	RBPMS	100	99.492	ENSMPUG00000011314	RBPMS	90	99.492	Mustela_putorius_furo
ENSFDAG00000012078	RBPMS	100	100.000	ENSMLUG00000009391	RBPMS	89	100.000	Myotis_lucifugus
ENSFDAG00000012078	RBPMS	100	99.492	ENSNGAG00000011141	Rbpms	90	99.492	Nannospalax_galili
ENSFDAG00000012078	RBPMS	100	87.931	ENSNBRG00000003313	RBPMS	97	87.931	Neolamprologus_brichardi
ENSFDAG00000012078	RBPMS	100	100.000	ENSNLEG00000036183	-	90	99.492	Nomascus_leucogenys
ENSFDAG00000012078	RBPMS	100	76.650	ENSOPRG00000013151	RBPMS	90	76.650	Ochotona_princeps
ENSFDAG00000012078	RBPMS	100	100.000	ENSODEG00000006700	RBPMS	90	99.492	Octodon_degus
ENSFDAG00000012078	RBPMS	100	87.931	ENSONIG00000007546	RBPMS	99	87.931	Oreochromis_niloticus
ENSFDAG00000012078	RBPMS	100	98.985	ENSOCUG00000008572	RBPMS	90	98.985	Oryctolagus_cuniculus
ENSFDAG00000012078	RBPMS	100	87.356	ENSORLG00000004135	-	89	87.356	Oryzias_latipes
ENSFDAG00000012078	RBPMS	100	87.356	ENSORLG00020016179	RBPMS	89	87.356	Oryzias_latipes_hni
ENSFDAG00000012078	RBPMS	100	87.356	ENSORLG00015013770	RBPMS	89	87.356	Oryzias_latipes_hsok
ENSFDAG00000012078	RBPMS	100	87.931	ENSOMEG00000005044	RBPMS	90	87.931	Oryzias_melastigma
ENSFDAG00000012078	RBPMS	91	97.484	ENSOGAG00000030298	RBPMS	70	98.718	Otolemur_garnettii
ENSFDAG00000012078	RBPMS	67	98.230	ENSOARG00000010366	RBPMS	80	98.230	Ovis_aries
ENSFDAG00000012078	RBPMS	100	100.000	ENSPPAG00000033108	RBPMS	100	100.000	Pan_paniscus
ENSFDAG00000012078	RBPMS	100	100.000	ENSPPRG00000004836	RBPMS	90	99.492	Panthera_pardus
ENSFDAG00000012078	RBPMS	100	100.000	ENSPTIG00000015964	RBPMS	90	99.492	Panthera_tigris_altaica
ENSFDAG00000012078	RBPMS	100	100.000	ENSPTRG00000020135	RBPMS	90	99.492	Pan_troglodytes
ENSFDAG00000012078	RBPMS	100	100.000	ENSPANG00000008143	RBPMS	90	99.492	Papio_anubis
ENSFDAG00000012078	RBPMS	100	85.632	ENSPKIG00000000535	-	92	85.632	Paramormyrops_kingsleyae
ENSFDAG00000012078	RBPMS	100	83.333	ENSPKIG00000004836	rbpms	92	83.333	Paramormyrops_kingsleyae
ENSFDAG00000012078	RBPMS	100	95.402	ENSPSIG00000006136	RBPMS	99	95.402	Pelodiscus_sinensis
ENSFDAG00000012078	RBPMS	90	88.462	ENSPMGG00000018012	RBPMS	89	75.879	Periophthalmus_magnuspinnatus
ENSFDAG00000012078	RBPMS	100	98.295	ENSPEMG00000021130	Rbpms	89	98.295	Peromyscus_maniculatus_bairdii
ENSFDAG00000012078	RBPMS	100	97.126	ENSPCIG00000019298	-	65	96.753	Phascolarctos_cinereus
ENSFDAG00000012078	RBPMS	100	87.931	ENSPFOG00000017158	RBPMS	89	87.931	Poecilia_formosa
ENSFDAG00000012078	RBPMS	100	87.931	ENSPLAG00000010767	RBPMS	89	87.931	Poecilia_latipinna
ENSFDAG00000012078	RBPMS	100	87.931	ENSPMEG00000009788	RBPMS	89	87.931	Poecilia_mexicana
ENSFDAG00000012078	RBPMS	100	87.931	ENSPREG00000016959	RBPMS	89	87.931	Poecilia_reticulata
ENSFDAG00000012078	RBPMS	100	99.492	ENSPPYG00000018487	RBPMS	90	99.492	Pongo_abelii
ENSFDAG00000012078	RBPMS	65	98.182	ENSPCAG00000013493	-	100	98.182	Procavia_capensis
ENSFDAG00000012078	RBPMS	87	97.674	ENSPCOG00000015948	RBPMS	89	97.674	Propithecus_coquereli
ENSFDAG00000012078	RBPMS	99	98.469	ENSPVAG00000001661	RBPMS	89	98.469	Pteropus_vampyrus
ENSFDAG00000012078	RBPMS	100	87.931	ENSPNYG00000001172	RBPMS	97	87.931	Pundamilia_nyererei
ENSFDAG00000012078	RBPMS	100	86.782	ENSPNAG00000029160	RBPMS	90	86.782	Pygocentrus_nattereri
ENSFDAG00000012078	RBPMS	100	98.990	ENSRNOG00000013328	Rbpms	90	98.990	Rattus_norvegicus
ENSFDAG00000012078	RBPMS	100	100.000	ENSRBIG00000038218	RBPMS	100	100.000	Rhinopithecus_bieti
ENSFDAG00000012078	RBPMS	100	100.000	ENSRROG00000042518	RBPMS	90	99.492	Rhinopithecus_roxellana
ENSFDAG00000012078	RBPMS	100	99.425	ENSSBOG00000026670	RBPMS	90	98.985	Saimiri_boliviensis_boliviensis
ENSFDAG00000012078	RBPMS	100	98.276	ENSSHAG00000010114	RBPMS	90	98.276	Sarcophilus_harrisii
ENSFDAG00000012078	RBPMS	100	82.759	ENSSFOG00015017481	-	92	82.759	Scleropages_formosus
ENSFDAG00000012078	RBPMS	100	87.356	ENSSFOG00015000417	rbpms	89	87.356	Scleropages_formosus
ENSFDAG00000012078	RBPMS	100	87.931	ENSSMAG00000010871	rbpms	89	87.931	Scophthalmus_maximus
ENSFDAG00000012078	RBPMS	100	87.931	ENSSDUG00000010894	RBPMS	90	87.931	Seriola_dumerili
ENSFDAG00000012078	RBPMS	100	87.931	ENSSLDG00000012916	RBPMS	89	87.931	Seriola_lalandi_dorsalis
ENSFDAG00000012078	RBPMS	100	95.939	ENSSARG00000000274	RBPMS	90	95.939	Sorex_araneus
ENSFDAG00000012078	RBPMS	100	97.701	ENSSPUG00000017525	RBPMS	67	97.701	Sphenodon_punctatus
ENSFDAG00000012078	RBPMS	100	68.966	ENSSPAG00000004777	rbpms	81	84.211	Stegastes_partitus
ENSFDAG00000012078	RBPMS	100	100.000	ENSSSCG00000015846	RBPMS	90	99.492	Sus_scrofa
ENSFDAG00000012078	RBPMS	100	97.701	ENSTGUG00000001776	RBPMS	92	97.701	Taeniopygia_guttata
ENSFDAG00000012078	RBPMS	100	87.356	ENSTRUG00000000041	RBPMS	89	87.356	Takifugu_rubripes
ENSFDAG00000012078	RBPMS	100	97.970	ENSTTRG00000012451	RBPMS	90	97.970	Tursiops_truncatus
ENSFDAG00000012078	RBPMS	69	94.872	ENSUAMG00000026353	RBPMS	75	96.491	Ursus_americanus
ENSFDAG00000012078	RBPMS	100	99.492	ENSUMAG00000007347	RBPMS	96	99.492	Ursus_maritimus
ENSFDAG00000012078	RBPMS	100	99.492	ENSVPAG00000010991	RBPMS	100	99.492	Vicugna_pacos
ENSFDAG00000012078	RBPMS	100	100.000	ENSVVUG00000019770	RBPMS	90	99.492	Vulpes_vulpes
ENSFDAG00000012078	RBPMS	100	93.678	ENSXETG00000011290	rbpms	100	93.678	Xenopus_tropicalis
ENSFDAG00000012078	RBPMS	100	81.609	ENSXCOG00000002436	RBPMS	89	81.609	Xiphophorus_couchianus
ENSFDAG00000012078	RBPMS	100	87.931	ENSXMAG00000027637	RBPMS	89	87.931	Xiphophorus_maculatus