EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000012082 (Gene tree)
Gene ID: 104854207
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 74209 bases
Position: chrKN124869.1:11922911-11997119
Accession: 104854207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000002327	Suf	PF05843.14	2.2e-84	1	1
ENSFDAP00000002331	Suf	PF05843.14	2.2e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000016161	CSTF3-202	2154	XM_010612642	ENSFDAP00000002331	717 (aa)	XP_010610944	UPI00053FDB9A
ENSFDAT00000016158	CSTF3-201	2145	-	ENSFDAP00000002327	714 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000012082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012082	CSTF3	100	99.861	ENSG00000176102	CSTF3	100	100.000	Homo_sapiens
ENSFDAG00000012082	CSTF3	100	91.504	ENSAPOG00000014054	cstf3	100	91.504	Acanthochromis_polyacanthus
ENSFDAG00000012082	CSTF3	99	99.718	ENSAMEG00000007187	CSTF3	98	99.718	Ailuropoda_melanoleuca
ENSFDAG00000012082	CSTF3	87	86.240	ENSACIG00000005539	cstf3	100	86.240	Amphilophus_citrinellus
ENSFDAG00000012082	CSTF3	100	91.226	ENSAOCG00000010930	cstf3	100	91.226	Amphiprion_ocellaris
ENSFDAG00000012082	CSTF3	100	91.226	ENSAPEG00000007903	cstf3	100	91.226	Amphiprion_percula
ENSFDAG00000012082	CSTF3	100	91.365	ENSATEG00000000190	cstf3	100	91.365	Anabas_testudineus
ENSFDAG00000012082	CSTF3	99	98.023	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSFDAG00000012082	CSTF3	100	95.682	ENSACAG00000002823	CSTF3	100	95.682	Anolis_carolinensis
ENSFDAG00000012082	CSTF3	100	99.861	ENSANAG00000020699	CSTF3	100	99.861	Aotus_nancymaae
ENSFDAG00000012082	CSTF3	98	91.915	ENSACLG00000007820	cstf3	100	91.226	Astatotilapia_calliptera
ENSFDAG00000012082	CSTF3	100	90.669	ENSAMXG00000014198	cstf3	100	90.947	Astyanax_mexicanus
ENSFDAG00000012082	CSTF3	100	99.861	ENSBTAG00000008617	CSTF3	100	99.861	Bos_taurus
ENSFDAG00000012082	CSTF3	97	49.313	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSFDAG00000012082	CSTF3	100	99.861	ENSCJAG00000005533	CSTF3	100	99.861	Callithrix_jacchus
ENSFDAG00000012082	CSTF3	100	99.721	ENSCAFG00000007264	CSTF3	100	99.721	Canis_familiaris
ENSFDAG00000012082	CSTF3	99	99.859	ENSCAFG00020002715	CSTF3	99	99.859	Canis_lupus_dingo
ENSFDAG00000012082	CSTF3	98	98.293	ENSCHIG00000016418	CSTF3	100	99.840	Capra_hircus
ENSFDAG00000012082	CSTF3	99	99.718	ENSTSYG00000000451	CSTF3	100	99.718	Carlito_syrichta
ENSFDAG00000012082	CSTF3	83	96.023	ENSCAPG00000010958	CSTF3	98	96.023	Cavia_aperea
ENSFDAG00000012082	CSTF3	100	99.442	ENSCPOG00000005545	CSTF3	100	99.442	Cavia_porcellus
ENSFDAG00000012082	CSTF3	100	99.861	ENSCCAG00000024790	CSTF3	100	99.861	Cebus_capucinus
ENSFDAG00000012082	CSTF3	100	99.861	ENSCATG00000007080	CSTF3	100	99.861	Cercocebus_atys
ENSFDAG00000012082	CSTF3	100	99.861	ENSCLAG00000016179	CSTF3	100	99.861	Chinchilla_lanigera
ENSFDAG00000012082	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSFDAG00000012082	CSTF3	100	97.354	ENSCPBG00000006753	CSTF3	100	97.354	Chrysemys_picta_bellii
ENSFDAG00000012082	CSTF3	99	62.098	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSFDAG00000012082	CSTF3	98	61.925	ENSCSAVG00000004851	-	100	61.925	Ciona_savignyi
ENSFDAG00000012082	CSTF3	100	99.861	ENSCANG00000035468	CSTF3	100	99.861	Colobus_angolensis_palliatus
ENSFDAG00000012082	CSTF3	100	99.163	ENSCGRG00001014773	Cstf3	100	99.163	Cricetulus_griseus_chok1gshd
ENSFDAG00000012082	CSTF3	100	99.163	ENSCGRG00000004142	Cstf3	100	99.163	Cricetulus_griseus_crigri
ENSFDAG00000012082	CSTF3	100	91.213	ENSCSEG00000014283	cstf3	100	91.213	Cynoglossus_semilaevis
ENSFDAG00000012082	CSTF3	100	90.390	ENSCVAG00000019739	cstf3	100	90.390	Cyprinodon_variegatus
ENSFDAG00000012082	CSTF3	100	90.934	ENSDARG00000018904	cstf3	100	90.934	Danio_rerio
ENSFDAG00000012082	CSTF3	99	98.880	ENSDNOG00000007366	CSTF3	99	98.880	Dasypus_novemcinctus
ENSFDAG00000012082	CSTF3	99	91.961	ENSDORG00000005898	Cstf3	99	91.961	Dipodomys_ordii
ENSFDAG00000012082	CSTF3	98	57.123	FBgn0003559	su(f)	98	57.123	Drosophila_melanogaster
ENSFDAG00000012082	CSTF3	90	94.081	ENSETEG00000017097	CSTF3	90	94.081	Echinops_telfairi
ENSFDAG00000012082	CSTF3	84	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSFDAG00000012082	CSTF3	98	99.714	ENSEASG00005019884	CSTF3	100	99.714	Equus_asinus_asinus
ENSFDAG00000012082	CSTF3	98	99.714	ENSECAG00000023338	CSTF3	100	99.714	Equus_caballus
ENSFDAG00000012082	CSTF3	100	94.003	ENSEEUG00000015167	CSTF3	100	94.003	Erinaceus_europaeus
ENSFDAG00000012082	CSTF3	100	89.819	ENSELUG00000023393	cstf3	100	89.819	Esox_lucius
ENSFDAG00000012082	CSTF3	100	99.861	ENSFCAG00000030711	CSTF3	100	99.861	Felis_catus
ENSFDAG00000012082	CSTF3	93	98.649	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSFDAG00000012082	CSTF3	100	90.390	ENSFHEG00000020623	cstf3	100	90.390	Fundulus_heteroclitus
ENSFDAG00000012082	CSTF3	100	89.430	ENSGMOG00000012275	cstf3	100	89.430	Gadus_morhua
ENSFDAG00000012082	CSTF3	100	98.050	ENSGALG00000011685	CSTF3	100	98.050	Gallus_gallus
ENSFDAG00000012082	CSTF3	100	90.808	ENSGAFG00000002181	cstf3	100	90.808	Gambusia_affinis
ENSFDAG00000012082	CSTF3	100	90.669	ENSGACG00000015997	cstf3	100	90.669	Gasterosteus_aculeatus
ENSFDAG00000012082	CSTF3	100	97.214	ENSGAGG00000006200	CSTF3	100	97.214	Gopherus_agassizii
ENSFDAG00000012082	CSTF3	99	94.334	ENSGGOG00000026591	CSTF3	99	94.334	Gorilla_gorilla
ENSFDAG00000012082	CSTF3	98	91.915	ENSHBUG00000016656	cstf3	100	91.226	Haplochromis_burtoni
ENSFDAG00000012082	CSTF3	100	99.582	ENSHGLG00000017834	CSTF3	100	99.582	Heterocephalus_glaber_female
ENSFDAG00000012082	CSTF3	100	99.582	ENSHGLG00100018042	CSTF3	100	99.582	Heterocephalus_glaber_male
ENSFDAG00000012082	CSTF3	98	89.235	ENSHCOG00000015218	cstf3	100	88.719	Hippocampus_comes
ENSFDAG00000012082	CSTF3	100	90.237	ENSIPUG00000013170	CSTF3	100	90.237	Ictalurus_punctatus
ENSFDAG00000012082	CSTF3	100	99.861	ENSSTOG00000013306	CSTF3	100	99.861	Ictidomys_tridecemlineatus
ENSFDAG00000012082	CSTF3	99	87.308	ENSJJAG00000018430	Cstf3	99	87.308	Jaculus_jaculus
ENSFDAG00000012082	CSTF3	100	89.694	ENSKMAG00000010916	cstf3	100	89.694	Kryptolebias_marmoratus
ENSFDAG00000012082	CSTF3	100	90.251	ENSLBEG00000002306	cstf3	100	90.251	Labrus_bergylta
ENSFDAG00000012082	CSTF3	100	93.863	ENSLACG00000017296	CSTF3	100	93.863	Latimeria_chalumnae
ENSFDAG00000012082	CSTF3	100	93.305	ENSLOCG00000004415	cstf3	100	93.305	Lepisosteus_oculatus
ENSFDAG00000012082	CSTF3	100	99.442	ENSLAFG00000008712	CSTF3	100	99.442	Loxodonta_africana
ENSFDAG00000012082	CSTF3	100	99.861	ENSMFAG00000029516	CSTF3	100	99.861	Macaca_fascicularis
ENSFDAG00000012082	CSTF3	100	99.861	ENSMMUG00000002542	CSTF3	100	99.861	Macaca_mulatta
ENSFDAG00000012082	CSTF3	100	99.861	ENSMNEG00000021807	CSTF3	100	99.861	Macaca_nemestrina
ENSFDAG00000012082	CSTF3	100	99.861	ENSMLEG00000039594	CSTF3	100	99.861	Mandrillus_leucophaeus
ENSFDAG00000012082	CSTF3	100	91.226	ENSMAMG00000020423	cstf3	100	91.226	Mastacembelus_armatus
ENSFDAG00000012082	CSTF3	98	91.915	ENSMZEG00005012082	cstf3	100	91.226	Maylandia_zebra
ENSFDAG00000012082	CSTF3	100	98.189	ENSMGAG00000001383	CSTF3	100	98.189	Meleagris_gallopavo
ENSFDAG00000012082	CSTF3	100	99.024	ENSMAUG00000002487	Cstf3	100	99.024	Mesocricetus_auratus
ENSFDAG00000012082	CSTF3	100	99.582	ENSMICG00000004784	CSTF3	100	99.582	Microcebus_murinus
ENSFDAG00000012082	CSTF3	100	99.163	ENSMOCG00000017583	Cstf3	100	99.163	Microtus_ochrogaster
ENSFDAG00000012082	CSTF3	99	91.268	ENSMMOG00000016026	cstf3	95	91.268	Mola_mola
ENSFDAG00000012082	CSTF3	100	84.100	ENSMODG00000025205	-	100	84.100	Monodelphis_domestica
ENSFDAG00000012082	CSTF3	100	98.605	ENSMODG00000009745	-	100	98.605	Monodelphis_domestica
ENSFDAG00000012082	CSTF3	100	90.947	ENSMALG00000012050	cstf3	100	90.947	Monopterus_albus
ENSFDAG00000012082	CSTF3	100	99.163	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.163	Mus_caroli
ENSFDAG00000012082	CSTF3	100	99.163	ENSMUSG00000027176	Cstf3	100	99.163	Mus_musculus
ENSFDAG00000012082	CSTF3	100	99.163	MGP_PahariEiJ_G0025464	Cstf3	100	99.163	Mus_pahari
ENSFDAG00000012082	CSTF3	100	99.163	MGP_SPRETEiJ_G0024939	Cstf3	100	99.163	Mus_spretus
ENSFDAG00000012082	CSTF3	100	99.582	ENSMPUG00000011457	CSTF3	100	99.582	Mustela_putorius_furo
ENSFDAG00000012082	CSTF3	100	96.095	ENSMLUG00000026022	-	100	96.095	Myotis_lucifugus
ENSFDAG00000012082	CSTF3	99	99.297	ENSMLUG00000003073	-	99	99.297	Myotis_lucifugus
ENSFDAG00000012082	CSTF3	100	99.163	ENSNGAG00000010677	Cstf3	100	99.163	Nannospalax_galili
ENSFDAG00000012082	CSTF3	87	91.200	ENSNBRG00000007345	cstf3	100	91.200	Neolamprologus_brichardi
ENSFDAG00000012082	CSTF3	100	99.861	ENSNLEG00000017901	CSTF3	100	99.861	Nomascus_leucogenys
ENSFDAG00000012082	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSFDAG00000012082	CSTF3	67	97.333	ENSOPRG00000000199	-	67	97.333	Ochotona_princeps
ENSFDAG00000012082	CSTF3	100	99.861	ENSODEG00000016737	-	100	99.861	Octodon_degus
ENSFDAG00000012082	CSTF3	89	87.264	ENSODEG00000006311	-	97	87.264	Octodon_degus
ENSFDAG00000012082	CSTF3	98	91.915	ENSONIG00000005563	cstf3	100	91.226	Oreochromis_niloticus
ENSFDAG00000012082	CSTF3	90	97.077	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSFDAG00000012082	CSTF3	100	99.442	ENSOCUG00000015417	CSTF3	100	99.442	Oryctolagus_cuniculus
ENSFDAG00000012082	CSTF3	100	90.795	ENSORLG00000009762	cstf3	100	90.795	Oryzias_latipes
ENSFDAG00000012082	CSTF3	100	90.795	ENSORLG00020005540	cstf3	100	90.795	Oryzias_latipes_hni
ENSFDAG00000012082	CSTF3	100	90.656	ENSORLG00015003551	cstf3	100	90.656	Oryzias_latipes_hsok
ENSFDAG00000012082	CSTF3	100	90.237	ENSOMEG00000003848	cstf3	100	90.237	Oryzias_melastigma
ENSFDAG00000012082	CSTF3	100	99.167	ENSOGAG00000010229	CSTF3	100	99.167	Otolemur_garnettii
ENSFDAG00000012082	CSTF3	90	99.689	ENSOARG00000017271	CSTF3	99	99.689	Ovis_aries
ENSFDAG00000012082	CSTF3	99	96.601	ENSPPAG00000027358	CSTF3	99	96.601	Pan_paniscus
ENSFDAG00000012082	CSTF3	100	99.861	ENSPPRG00000016852	CSTF3	100	99.861	Panthera_pardus
ENSFDAG00000012082	CSTF3	100	99.861	ENSPTIG00000008716	CSTF3	100	99.861	Panthera_tigris_altaica
ENSFDAG00000012082	CSTF3	100	99.861	ENSPTRG00000003485	CSTF3	100	99.861	Pan_troglodytes
ENSFDAG00000012082	CSTF3	100	99.861	ENSPANG00000013722	CSTF3	100	99.861	Papio_anubis
ENSFDAG00000012082	CSTF3	100	92.469	ENSPKIG00000023648	cstf3	100	92.469	Paramormyrops_kingsleyae
ENSFDAG00000012082	CSTF3	100	96.936	ENSPSIG00000009173	CSTF3	100	96.936	Pelodiscus_sinensis
ENSFDAG00000012082	CSTF3	76	94.698	ENSPMGG00000000164	cstf3	99	94.698	Periophthalmus_magnuspinnatus
ENSFDAG00000012082	CSTF3	100	99.024	ENSPEMG00000011481	Cstf3	100	99.024	Peromyscus_maniculatus_bairdii
ENSFDAG00000012082	CSTF3	99	80.337	ENSPMAG00000007282	cstf3	99	80.337	Petromyzon_marinus
ENSFDAG00000012082	CSTF3	100	81.058	ENSPCIG00000030419	-	90	81.755	Phascolarctos_cinereus
ENSFDAG00000012082	CSTF3	99	95.910	ENSPCIG00000026406	-	100	98.080	Phascolarctos_cinereus
ENSFDAG00000012082	CSTF3	100	90.947	ENSPFOG00000017239	cstf3	100	90.947	Poecilia_formosa
ENSFDAG00000012082	CSTF3	100	90.947	ENSPLAG00000009456	cstf3	100	90.947	Poecilia_latipinna
ENSFDAG00000012082	CSTF3	100	90.947	ENSPMEG00000010320	cstf3	100	90.947	Poecilia_mexicana
ENSFDAG00000012082	CSTF3	100	90.947	ENSPREG00000013549	cstf3	100	90.947	Poecilia_reticulata
ENSFDAG00000012082	CSTF3	100	99.861	ENSPPYG00000003375	CSTF3	100	99.861	Pongo_abelii
ENSFDAG00000012082	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSFDAG00000012082	CSTF3	100	94.421	ENSPCOG00000014417	CSTF3	100	94.421	Propithecus_coquereli
ENSFDAG00000012082	CSTF3	100	94.421	ENSPVAG00000002350	CSTF3	100	94.421	Pteropus_vampyrus
ENSFDAG00000012082	CSTF3	98	91.915	ENSPNYG00000018259	cstf3	100	91.226	Pundamilia_nyererei
ENSFDAG00000012082	CSTF3	100	92.050	ENSPNAG00000020182	cstf3	100	92.050	Pygocentrus_nattereri
ENSFDAG00000012082	CSTF3	87	99.040	ENSRNOG00000012089	Cstf3	100	99.040	Rattus_norvegicus
ENSFDAG00000012082	CSTF3	99	98.449	ENSRBIG00000044258	CSTF3	100	99.840	Rhinopithecus_bieti
ENSFDAG00000012082	CSTF3	100	99.861	ENSRROG00000043450	CSTF3	100	99.861	Rhinopithecus_roxellana
ENSFDAG00000012082	CSTF3	100	99.861	ENSSBOG00000024764	CSTF3	100	99.861	Saimiri_boliviensis_boliviensis
ENSFDAG00000012082	CSTF3	100	97.768	ENSSHAG00000018128	-	100	97.768	Sarcophilus_harrisii
ENSFDAG00000012082	CSTF3	100	85.356	ENSSHAG00000003135	-	99	85.356	Sarcophilus_harrisii
ENSFDAG00000012082	CSTF3	100	92.190	ENSSFOG00015022133	cstf3	100	92.190	Scleropages_formosus
ENSFDAG00000012082	CSTF3	100	90.390	ENSSMAG00000002197	cstf3	100	90.390	Scophthalmus_maximus
ENSFDAG00000012082	CSTF3	100	91.226	ENSSDUG00000020426	cstf3	100	91.226	Seriola_dumerili
ENSFDAG00000012082	CSTF3	100	91.365	ENSSLDG00000025649	cstf3	100	91.365	Seriola_lalandi_dorsalis
ENSFDAG00000012082	CSTF3	100	99.442	ENSSARG00000000391	CSTF3	100	99.442	Sorex_araneus
ENSFDAG00000012082	CSTF3	96	97.106	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSFDAG00000012082	CSTF3	100	91.365	ENSSPAG00000004958	cstf3	100	91.365	Stegastes_partitus
ENSFDAG00000012082	CSTF3	99	99.162	ENSSSCG00000040954	CSTF3	100	99.162	Sus_scrofa
ENSFDAG00000012082	CSTF3	99	97.740	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSFDAG00000012082	CSTF3	100	89.972	ENSTRUG00000004959	cstf3	100	89.972	Takifugu_rubripes
ENSFDAG00000012082	CSTF3	99	90.845	ENSTNIG00000013811	cstf3	99	90.845	Tetraodon_nigroviridis
ENSFDAG00000012082	CSTF3	90	96.262	ENSTBEG00000001544	CSTF3	90	96.262	Tupaia_belangeri
ENSFDAG00000012082	CSTF3	100	96.792	ENSTTRG00000016366	CSTF3	100	96.792	Tursiops_truncatus
ENSFDAG00000012082	CSTF3	99	99.577	ENSUMAG00000018971	CSTF3	100	99.520	Ursus_maritimus
ENSFDAG00000012082	CSTF3	100	99.721	ENSVPAG00000007800	CSTF3	100	99.721	Vicugna_pacos
ENSFDAG00000012082	CSTF3	99	99.859	ENSVVUG00000014938	CSTF3	100	99.840	Vulpes_vulpes
ENSFDAG00000012082	CSTF3	88	79.375	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSFDAG00000012082	CSTF3	66	43.595	ENSXETG00000017946	-	99	43.595	Xenopus_tropicalis
ENSFDAG00000012082	CSTF3	87	90.560	ENSXCOG00000011741	cstf3	100	90.560	Xiphophorus_couchianus
ENSFDAG00000012082	CSTF3	100	90.947	ENSXMAG00000009545	cstf3	100	90.947	Xiphophorus_maculatus