EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000012121 (Gene tree)
Gene ID: 104873723
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 37661 bases
Position: chrKN123200.1:721790-759450
Accession: 104873723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000002368	EST1	PF10374.9	5.8e-25	1	1
ENSFDAP00000002389	EST1	PF10374.9	5.9e-25	1	1
ENSFDAP00000002368	EST1_DNA_bind	PF10373.9	2.2e-55	1	1
ENSFDAP00000002389	EST1_DNA_bind	PF10373.9	2.2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000016195	SMG7-201	3402	-	ENSFDAP00000002368	1133 (aa)	-	-
ENSFDAT00000016214	SMG7-202	3819	XM_010640550	ENSFDAP00000002389	1152 (aa)	XP_010638852	-

Gene Model

Click here to download ENSFDAG00000012121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012121	SMG7	99	97.148	ENSG00000116698	SMG7	100	97.354	Homo_sapiens
ENSFDAG00000012121	SMG7	88	71.121	ENSAPOG00000009611	smg7	95	71.515	Acanthochromis_polyacanthus
ENSFDAG00000012121	SMG7	97	92.576	ENSAMEG00000002357	SMG7	100	92.576	Ailuropoda_melanoleuca
ENSFDAG00000012121	SMG7	98	60.274	ENSACIG00000015152	smg7	100	60.292	Amphilophus_citrinellus
ENSFDAG00000012121	SMG7	99	64.500	ENSAOCG00000013538	smg7	99	65.182	Amphiprion_ocellaris
ENSFDAG00000012121	SMG7	99	64.363	ENSAPEG00000007851	smg7	99	65.045	Amphiprion_percula
ENSFDAG00000012121	SMG7	99	62.023	ENSATEG00000006931	smg7	99	62.859	Anabas_testudineus
ENSFDAG00000012121	SMG7	99	81.687	ENSAPLG00000015811	SMG7	99	81.772	Anas_platyrhynchos
ENSFDAG00000012121	SMG7	99	84.041	ENSACAG00000014989	SMG7	99	84.272	Anolis_carolinensis
ENSFDAG00000012121	SMG7	96	96.682	ENSANAG00000028114	SMG7	99	92.658	Aotus_nancymaae
ENSFDAG00000012121	SMG7	99	63.576	ENSACLG00000022079	smg7	99	64.764	Astatotilapia_calliptera
ENSFDAG00000012121	SMG7	99	66.130	ENSAMXG00000020809	smg7	99	66.639	Astyanax_mexicanus
ENSFDAG00000012121	SMG7	99	95.633	ENSBTAG00000008003	SMG7	97	95.756	Bos_taurus
ENSFDAG00000012121	SMG7	99	96.702	ENSCJAG00000005135	SMG7	97	96.817	Callithrix_jacchus
ENSFDAG00000012121	SMG7	99	96.524	ENSCAFG00000013276	SMG7	97	96.640	Canis_familiaris
ENSFDAG00000012121	SMG7	99	96.524	ENSCAFG00020015475	SMG7	97	96.640	Canis_lupus_dingo
ENSFDAG00000012121	SMG7	98	96.021	ENSCHIG00000018192	SMG7	99	96.021	Capra_hircus
ENSFDAG00000012121	SMG7	99	96.435	ENSTSYG00000002667	SMG7	97	96.552	Carlito_syrichta
ENSFDAG00000012121	SMG7	99	97.861	ENSCPOG00000008906	SMG7	99	97.859	Cavia_porcellus
ENSFDAG00000012121	SMG7	97	93.100	ENSCCAG00000028596	SMG7	100	93.100	Cebus_capucinus
ENSFDAG00000012121	SMG7	99	97.326	ENSCATG00000011063	SMG7	97	97.436	Cercocebus_atys
ENSFDAG00000012121	SMG7	99	97.504	ENSCLAG00000010751	SMG7	99	97.103	Chinchilla_lanigera
ENSFDAG00000012121	SMG7	99	97.148	ENSCSAG00000012654	SMG7	97	97.259	Chlorocebus_sabaeus
ENSFDAG00000012121	SMG7	92	88.443	ENSCHOG00000010522	SMG7	93	88.825	Choloepus_hoffmanni
ENSFDAG00000012121	SMG7	99	87.874	ENSCPBG00000015724	SMG7	99	87.817	Chrysemys_picta_bellii
ENSFDAG00000012121	SMG7	97	93.362	ENSCANG00000015680	SMG7	100	93.362	Colobus_angolensis_palliatus
ENSFDAG00000012121	SMG7	99	95.897	ENSCGRG00001013705	Smg7	99	95.431	Cricetulus_griseus_chok1gshd
ENSFDAG00000012121	SMG7	99	95.897	ENSCGRG00000018401	Smg7	98	95.929	Cricetulus_griseus_crigri
ENSFDAG00000012121	SMG7	93	69.000	ENSCVAG00000011842	smg7	100	68.500	Cyprinodon_variegatus
ENSFDAG00000012121	SMG7	99	65.993	ENSDARG00000060767	smg7	99	66.113	Danio_rerio
ENSFDAG00000012121	SMG7	99	95.722	ENSDORG00000007331	Smg7	99	95.347	Dipodomys_ordii
ENSFDAG00000012121	SMG7	96	95.023	ENSETEG00000002654	SMG7	99	94.646	Echinops_telfairi
ENSFDAG00000012121	SMG7	99	96.970	ENSEASG00005006524	SMG7	99	96.576	Equus_asinus_asinus
ENSFDAG00000012121	SMG7	99	97.059	ENSECAG00000004313	SMG7	99	97.040	Equus_caballus
ENSFDAG00000012121	SMG7	95	95.941	ENSEEUG00000002024	SMG7	92	95.941	Erinaceus_europaeus
ENSFDAG00000012121	SMG7	92	76.418	ENSELUG00000010293	smg7	99	64.876	Esox_lucius
ENSFDAG00000012121	SMG7	99	96.702	ENSFCAG00000010900	SMG7	99	96.313	Felis_catus
ENSFDAG00000012121	SMG7	99	82.809	ENSFALG00000003047	SMG7	100	82.398	Ficedula_albicollis
ENSFDAG00000012121	SMG7	99	60.202	ENSFHEG00000011073	smg7	99	61.097	Fundulus_heteroclitus
ENSFDAG00000012121	SMG7	88	67.362	ENSGMOG00000004916	smg7	92	67.742	Gadus_morhua
ENSFDAG00000012121	SMG7	99	81.532	ENSGALG00000004667	SMG7	99	81.535	Gallus_gallus
ENSFDAG00000012121	SMG7	99	60.639	ENSGAFG00000019000	smg7	99	60.750	Gambusia_affinis
ENSFDAG00000012121	SMG7	96	64.417	ENSGACG00000001634	smg7	99	64.855	Gasterosteus_aculeatus
ENSFDAG00000012121	SMG7	99	97.059	ENSGGOG00000002342	SMG7	97	97.171	Gorilla_gorilla
ENSFDAG00000012121	SMG7	99	63.576	ENSHBUG00000003726	smg7	97	72.081	Haplochromis_burtoni
ENSFDAG00000012121	SMG7	99	98.485	ENSHGLG00000009353	SMG7	100	98.485	Heterocephalus_glaber_female
ENSFDAG00000012121	SMG7	99	96.791	ENSHGLG00100009637	-	100	96.791	Heterocephalus_glaber_male
ENSFDAG00000012121	SMG7	99	90.374	ENSHGLG00100004878	-	99	89.991	Heterocephalus_glaber_male
ENSFDAG00000012121	SMG7	99	67.254	ENSIPUG00000016997	smg7	99	67.338	Ictalurus_punctatus
ENSFDAG00000012121	SMG7	99	97.326	ENSSTOG00000000401	SMG7	99	96.927	Ictidomys_tridecemlineatus
ENSFDAG00000012121	SMG7	99	95.094	ENSJJAG00000012351	Smg7	99	94.728	Jaculus_jaculus
ENSFDAG00000012121	SMG7	98	58.559	ENSKMAG00000004900	smg7	100	59.037	Kryptolebias_marmoratus
ENSFDAG00000012121	SMG7	99	61.997	ENSLBEG00000002983	smg7	99	62.448	Labrus_bergylta
ENSFDAG00000012121	SMG7	99	74.869	ENSLACG00000000972	SMG7	99	75.130	Latimeria_chalumnae
ENSFDAG00000012121	SMG7	99	67.032	ENSLOCG00000002010	smg7	99	67.364	Lepisosteus_oculatus
ENSFDAG00000012121	SMG7	99	96.346	ENSLAFG00000008186	SMG7	99	96.463	Loxodonta_africana
ENSFDAG00000012121	SMG7	99	97.237	ENSMFAG00000031653	SMG7	99	96.839	Macaca_fascicularis
ENSFDAG00000012121	SMG7	99	97.326	ENSMMUG00000018458	SMG7	97	97.436	Macaca_mulatta
ENSFDAG00000012121	SMG7	97	93.450	ENSMNEG00000034798	SMG7	100	93.450	Macaca_nemestrina
ENSFDAG00000012121	SMG7	99	97.326	ENSMLEG00000037170	SMG7	97	97.436	Mandrillus_leucophaeus
ENSFDAG00000012121	SMG7	87	63.722	ENSMAMG00000018733	smg7	84	65.208	Mastacembelus_armatus
ENSFDAG00000012121	SMG7	99	63.847	ENSMZEG00005015247	smg7	99	64.439	Maylandia_zebra
ENSFDAG00000012121	SMG7	97	81.093	ENSMGAG00000001561	SMG7	98	81.153	Meleagris_gallopavo
ENSFDAG00000012121	SMG7	99	96.429	ENSMAUG00000019484	Smg7	99	96.429	Mesocricetus_auratus
ENSFDAG00000012121	SMG7	99	97.148	ENSMICG00000007145	SMG7	98	97.259	Microcebus_murinus
ENSFDAG00000012121	SMG7	99	96.164	ENSMOCG00000020748	Smg7	99	95.694	Microtus_ochrogaster
ENSFDAG00000012121	SMG7	99	59.882	ENSMMOG00000001524	smg7	99	60.384	Mola_mola
ENSFDAG00000012121	SMG7	92	84.964	ENSMODG00000007139	SMG7	99	84.964	Monodelphis_domestica
ENSFDAG00000012121	SMG7	96	67.980	ENSMALG00000000061	smg7	93	67.980	Monopterus_albus
ENSFDAG00000012121	SMG7	99	96.075	MGP_CAROLIEiJ_G0014704	Smg7	99	95.343	Mus_caroli
ENSFDAG00000012121	SMG7	99	95.986	ENSMUSG00000042772	Smg7	99	95.518	Mus_musculus
ENSFDAG00000012121	SMG7	99	95.897	MGP_PahariEiJ_G0027940	Smg7	99	95.431	Mus_pahari
ENSFDAG00000012121	SMG7	99	96.075	MGP_SPRETEiJ_G0015511	Smg7	99	95.606	Mus_spretus
ENSFDAG00000012121	SMG7	100	96.300	ENSMPUG00000011732	SMG7	98	96.300	Mustela_putorius_furo
ENSFDAG00000012121	SMG7	99	95.989	ENSMLUG00000015417	SMG7	99	96.110	Myotis_lucifugus
ENSFDAG00000012121	SMG7	99	96.253	ENSNGAG00000009836	Smg7	99	96.157	Nannospalax_galili
ENSFDAG00000012121	SMG7	99	57.573	ENSNBRG00000024343	smg7	98	70.000	Neolamprologus_brichardi
ENSFDAG00000012121	SMG7	99	97.326	ENSNLEG00000018018	SMG7	97	97.436	Nomascus_leucogenys
ENSFDAG00000012121	SMG7	77	85.856	ENSMEUG00000004681	SMG7	77	86.053	Notamacropus_eugenii
ENSFDAG00000012121	SMG7	96	84.147	ENSOPRG00000013942	SMG7	96	84.095	Ochotona_princeps
ENSFDAG00000012121	SMG7	99	97.594	ENSODEG00000010390	SMG7	99	97.191	Octodon_degus
ENSFDAG00000012121	SMG7	99	60.779	ENSONIG00000000277	smg7	99	62.138	Oreochromis_niloticus
ENSFDAG00000012121	SMG7	99	90.417	ENSOANG00000000994	SMG7	100	90.780	Ornithorhynchus_anatinus
ENSFDAG00000012121	SMG7	99	89.929	ENSOCUG00000005887	SMG7	92	90.274	Oryctolagus_cuniculus
ENSFDAG00000012121	SMG7	99	61.857	ENSORLG00000007314	smg7	74	89.375	Oryzias_latipes
ENSFDAG00000012121	SMG7	99	62.278	ENSORLG00020015779	smg7	73	89.375	Oryzias_latipes_hni
ENSFDAG00000012121	SMG7	99	63.861	ENSORLG00015012289	smg7	99	62.333	Oryzias_latipes_hsok
ENSFDAG00000012121	SMG7	99	62.237	ENSOMEG00000002328	smg7	99	62.417	Oryzias_melastigma
ENSFDAG00000012121	SMG7	96	96.221	ENSOGAG00000003107	SMG7	94	96.098	Otolemur_garnettii
ENSFDAG00000012121	SMG7	99	95.811	ENSOARG00000001352	SMG7	97	95.933	Ovis_aries
ENSFDAG00000012121	SMG7	97	93.450	ENSPPAG00000031619	SMG7	100	93.450	Pan_paniscus
ENSFDAG00000012121	SMG7	99	96.791	ENSPPRG00000011222	SMG7	97	96.905	Panthera_pardus
ENSFDAG00000012121	SMG7	97	95.212	ENSPTIG00000007242	SMG7	100	92.926	Panthera_tigris_altaica
ENSFDAG00000012121	SMG7	96	97.235	ENSPTRG00000001764	SMG7	100	93.450	Pan_troglodytes
ENSFDAG00000012121	SMG7	99	97.326	ENSPANG00000004520	SMG7	97	97.436	Papio_anubis
ENSFDAG00000012121	SMG7	99	63.629	ENSPKIG00000007242	smg7	99	67.000	Paramormyrops_kingsleyae
ENSFDAG00000012121	SMG7	99	90.917	ENSPSIG00000012201	SMG7	99	90.724	Pelodiscus_sinensis
ENSFDAG00000012121	SMG7	55	57.653	ENSPMGG00000021833	smg7	89	57.500	Periophthalmus_magnuspinnatus
ENSFDAG00000012121	SMG7	99	95.183	ENSPEMG00000011315	Smg7	99	94.844	Peromyscus_maniculatus_bairdii
ENSFDAG00000012121	SMG7	99	89.735	ENSPCIG00000003786	SMG7	99	91.414	Phascolarctos_cinereus
ENSFDAG00000012121	SMG7	99	62.552	ENSPFOG00000019219	smg7	99	63.289	Poecilia_formosa
ENSFDAG00000012121	SMG7	99	60.489	ENSPLAG00000001446	smg7	99	60.967	Poecilia_latipinna
ENSFDAG00000012121	SMG7	96	59.931	ENSPMEG00000005218	smg7	99	60.429	Poecilia_mexicana
ENSFDAG00000012121	SMG7	86	60.038	ENSPREG00000019039	smg7	91	60.076	Poecilia_reticulata
ENSFDAG00000012121	SMG7	99	89.384	ENSPPYG00000000427	SMG7	99	89.114	Pongo_abelii
ENSFDAG00000012121	SMG7	95	84.594	ENSPCAG00000008360	SMG7	94	84.594	Procavia_capensis
ENSFDAG00000012121	SMG7	99	97.237	ENSPCOG00000011996	SMG7	97	97.347	Propithecus_coquereli
ENSFDAG00000012121	SMG7	91	90.874	ENSPVAG00000000851	SMG7	89	91.049	Pteropus_vampyrus
ENSFDAG00000012121	SMG7	99	63.433	ENSPNYG00000007643	smg7	99	64.540	Pundamilia_nyererei
ENSFDAG00000012121	SMG7	99	66.414	ENSPNAG00000011374	smg7	98	68.687	Pygocentrus_nattereri
ENSFDAG00000012121	SMG7	99	95.811	ENSRNOG00000027962	Smg7	100	96.159	Rattus_norvegicus
ENSFDAG00000012121	SMG7	99	97.237	ENSRBIG00000036316	SMG7	97	97.347	Rhinopithecus_bieti
ENSFDAG00000012121	SMG7	99	97.237	ENSRROG00000035719	SMG7	99	96.839	Rhinopithecus_roxellana
ENSFDAG00000012121	SMG7	99	96.791	ENSSBOG00000023454	SMG7	99	96.400	Saimiri_boliviensis_boliviensis
ENSFDAG00000012121	SMG7	99	85.545	ENSSHAG00000013147	SMG7	99	85.267	Sarcophilus_harrisii
ENSFDAG00000012121	SMG7	91	75.132	ENSSFOG00015017252	smg7	99	75.132	Scleropages_formosus
ENSFDAG00000012121	SMG7	99	64.202	ENSSMAG00000006067	smg7	99	64.422	Scophthalmus_maximus
ENSFDAG00000012121	SMG7	95	71.227	ENSSDUG00000017543	smg7	99	62.100	Seriola_dumerili
ENSFDAG00000012121	SMG7	99	82.253	ENSSPUG00000002064	SMG7	99	82.303	Sphenodon_punctatus
ENSFDAG00000012121	SMG7	99	62.060	ENSSPAG00000008733	smg7	99	61.988	Stegastes_partitus
ENSFDAG00000012121	SMG7	99	96.791	ENSSSCG00000015558	SMG7	99	96.400	Sus_scrofa
ENSFDAG00000012121	SMG7	99	81.362	ENSTGUG00000003928	SMG7	99	81.503	Taeniopygia_guttata
ENSFDAG00000012121	SMG7	99	63.189	ENSTNIG00000002802	smg7	99	63.367	Tetraodon_nigroviridis
ENSFDAG00000012121	SMG7	77	94.068	ENSTBEG00000003220	SMG7	75	94.068	Tupaia_belangeri
ENSFDAG00000012121	SMG7	96	96.590	ENSTTRG00000014778	SMG7	93	96.709	Tursiops_truncatus
ENSFDAG00000012121	SMG7	97	91.629	ENSUAMG00000017473	SMG7	100	91.538	Ursus_americanus
ENSFDAG00000012121	SMG7	97	96.724	ENSUMAG00000016389	SMG7	100	96.724	Ursus_maritimus
ENSFDAG00000012121	SMG7	99	96.613	ENSVVUG00000008976	SMG7	99	96.225	Vulpes_vulpes
ENSFDAG00000012121	SMG7	99	65.878	ENSXETG00000012528	smg7	99	66.275	Xenopus_tropicalis
ENSFDAG00000012121	SMG7	99	60.354	ENSXMAG00000007123	smg7	99	60.801	Xiphophorus_maculatus