EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000012191 (Gene tree)
Gene ID: 104867199
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 2883 bases
Position: chrKN122459.1:3900116-3902998
Accession: 104867199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000002507	RRM_1	PF00076.22	3.4e-21	1	2
ENSFDAP00000002507	RRM_1	PF00076.22	3.4e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000028755	SRSF6-201	879	XM_010631505	ENSFDAP00000002507	292 (aa)	XP_010629807	-

Gene Model

Click here to download ENSFDAG00000012191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000012191	SRSF6	50	33.000	ENSFDAG00000010646	-	78	33.663

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012191	SRSF6	94	78.769	ENSG00000124193	SRSF6	94	81.790	Homo_sapiens
ENSFDAG00000012191	SRSF6	92	97.222	ENSAMEG00000003710	SRSF6	94	80.000	Ailuropoda_melanoleuca
ENSFDAG00000012191	SRSF6	85	49.329	ENSACIG00000023658	-	56	65.363	Amphilophus_citrinellus
ENSFDAG00000012191	SRSF6	68	54.510	ENSACIG00000020091	-	95	50.394	Amphilophus_citrinellus
ENSFDAG00000012191	SRSF6	60	53.304	ENSAPEG00000020746	-	66	60.106	Amphiprion_percula
ENSFDAG00000012191	SRSF6	93	66.769	ENSACAG00000002061	SRSF6	92	70.497	Anolis_carolinensis
ENSFDAG00000012191	SRSF6	94	78.462	ENSANAG00000024080	SRSF6	94	81.481	Aotus_nancymaae
ENSFDAG00000012191	SRSF6	93	78.261	ENSBTAG00000008527	SRSF6	94	80.864	Bos_taurus
ENSFDAG00000012191	SRSF6	74	80.597	ENSCJAG00000048403	SRSF6	99	80.597	Callithrix_jacchus
ENSFDAG00000012191	SRSF6	93	78.086	ENSCAFG00000009289	SRSF6	94	80.556	Canis_familiaris
ENSFDAG00000012191	SRSF6	93	78.086	ENSCAFG00020013559	SRSF6	94	80.556	Canis_lupus_dingo
ENSFDAG00000012191	SRSF6	93	78.395	ENSCHIG00000009148	-	94	80.864	Capra_hircus
ENSFDAG00000012191	SRSF6	93	78.395	ENSCHIG00000015890	-	94	80.864	Capra_hircus
ENSFDAG00000012191	SRSF6	93	96.310	ENSTSYG00000026476	SRSF6	93	96.337	Carlito_syrichta
ENSFDAG00000012191	SRSF6	93	62.654	ENSCPOG00000011761	SRSF6	78	94.366	Cavia_porcellus
ENSFDAG00000012191	SRSF6	94	78.462	ENSCCAG00000026018	-	94	81.481	Cebus_capucinus
ENSFDAG00000012191	SRSF6	94	59.434	ENSCCAG00000018540	-	62	69.444	Cebus_capucinus
ENSFDAG00000012191	SRSF6	93	79.321	ENSCATG00000030794	SRSF6	94	82.099	Cercocebus_atys
ENSFDAG00000012191	SRSF6	100	84.257	ENSCLAG00000010247	SRSF6	100	84.257	Chinchilla_lanigera
ENSFDAG00000012191	SRSF6	93	79.321	ENSCSAG00000014022	SRSF6	94	82.099	Chlorocebus_sabaeus
ENSFDAG00000012191	SRSF6	93	100.000	ENSCHOG00000000561	SRSF6	94	81.790	Choloepus_hoffmanni
ENSFDAG00000012191	SRSF6	100	96.599	ENSCANG00000042529	-	100	96.599	Colobus_angolensis_palliatus
ENSFDAG00000012191	SRSF6	93	78.395	ENSCANG00000037774	-	94	81.173	Colobus_angolensis_palliatus
ENSFDAG00000012191	SRSF6	100	81.633	ENSCGRG00001022339	Srsf6	100	81.633	Cricetulus_griseus_chok1gshd
ENSFDAG00000012191	SRSF6	73	94.860	ENSCGRG00000006618	Srsf6	100	94.860	Cricetulus_griseus_crigri
ENSFDAG00000012191	SRSF6	93	77.469	ENSDNOG00000008410	SRSF6	94	80.247	Dasypus_novemcinctus
ENSFDAG00000012191	SRSF6	100	83.140	ENSDORG00000028378	Srsf6	100	83.140	Dipodomys_ordii
ENSFDAG00000012191	SRSF6	92	78.056	ENSETEG00000006221	SRSF6	94	79.193	Echinops_telfairi
ENSFDAG00000012191	SRSF6	93	77.160	ENSEASG00005023429	SRSF6	94	80.556	Equus_asinus_asinus
ENSFDAG00000012191	SRSF6	93	77.160	ENSECAG00000023932	SRSF6	94	80.556	Equus_caballus
ENSFDAG00000012191	SRSF6	67	93.333	ENSEEUG00000002324	SRSF6	90	93.401	Erinaceus_europaeus
ENSFDAG00000012191	SRSF6	59	54.419	ENSELUG00000013506	SRSF6	63	60.541	Esox_lucius
ENSFDAG00000012191	SRSF6	93	78.086	ENSFCAG00000032814	SRSF6	94	80.556	Felis_catus
ENSFDAG00000012191	SRSF6	86	55.921	ENSFHEG00000023065	srsf6a	55	66.120	Fundulus_heteroclitus
ENSFDAG00000012191	SRSF6	92	68.902	ENSGALG00000000990	SRSF6	94	67.169	Gallus_gallus
ENSFDAG00000012191	SRSF6	86	45.133	ENSGACG00000006084	srsf6a	53	61.828	Gasterosteus_aculeatus
ENSFDAG00000012191	SRSF6	51	93.333	ENSGGOG00000043139	-	99	86.413	Gorilla_gorilla
ENSFDAG00000012191	SRSF6	94	78.769	ENSGGOG00000009808	SRSF6	94	81.790	Gorilla_gorilla
ENSFDAG00000012191	SRSF6	57	56.250	ENSHBUG00000006386	-	58	63.889	Haplochromis_burtoni
ENSFDAG00000012191	SRSF6	100	84.257	ENSHGLG00000007348	SRSF6	100	84.257	Heterocephalus_glaber_female
ENSFDAG00000012191	SRSF6	86	67.347	ENSHGLG00000007701	-	58	58.824	Heterocephalus_glaber_female
ENSFDAG00000012191	SRSF6	100	98.973	ENSHGLG00100005043	SRSF6	100	98.973	Heterocephalus_glaber_male
ENSFDAG00000012191	SRSF6	100	82.558	ENSSTOG00000010866	SRSF6	100	82.558	Ictidomys_tridecemlineatus
ENSFDAG00000012191	SRSF6	66	92.746	ENSJJAG00000020690	Srsf6	91	91.795	Jaculus_jaculus
ENSFDAG00000012191	SRSF6	87	67.308	ENSLACG00000005466	SRSF6	54	67.568	Latimeria_chalumnae
ENSFDAG00000012191	SRSF6	82	93.724	ENSLAFG00000006682	SRSF6	92	94.118	Loxodonta_africana
ENSFDAG00000012191	SRSF6	93	79.321	ENSMFAG00000036925	SRSF6	94	82.099	Macaca_fascicularis
ENSFDAG00000012191	SRSF6	93	79.321	ENSMMUG00000006742	SRSF6	94	82.099	Macaca_mulatta
ENSFDAG00000012191	SRSF6	93	78.571	ENSMNEG00000038270	-	94	81.481	Macaca_nemestrina
ENSFDAG00000012191	SRSF6	93	78.086	ENSMNEG00000027392	-	94	82.099	Macaca_nemestrina
ENSFDAG00000012191	SRSF6	67	96.410	ENSMLEG00000031524	SRSF6	90	96.410	Mandrillus_leucophaeus
ENSFDAG00000012191	SRSF6	56	54.626	ENSMZEG00005008032	-	57	63.889	Maylandia_zebra
ENSFDAG00000012191	SRSF6	94	77.538	ENSMICG00000008537	SRSF6	94	80.556	Microcebus_murinus
ENSFDAG00000012191	SRSF6	73	94.860	ENSMOCG00000018738	Srsf6	100	94.860	Microtus_ochrogaster
ENSFDAG00000012191	SRSF6	93	77.778	MGP_CAROLIEiJ_G0024606	Srsf6	95	80.247	Mus_caroli
ENSFDAG00000012191	SRSF6	93	78.086	ENSMUSG00000016921	Srsf6	95	80.556	Mus_musculus
ENSFDAG00000012191	SRSF6	93	78.086	MGP_PahariEiJ_G0026050	Srsf6	95	80.247	Mus_pahari
ENSFDAG00000012191	SRSF6	93	78.086	MGP_SPRETEiJ_G0025528	Srsf6	95	80.556	Mus_spretus
ENSFDAG00000012191	SRSF6	81	80.208	ENSMPUG00000017692	SRSF6	99	80.208	Mustela_putorius_furo
ENSFDAG00000012191	SRSF6	93	79.193	ENSMLUG00000016618	SRSF6	94	79.321	Myotis_lucifugus
ENSFDAG00000012191	SRSF6	100	81.633	ENSNGAG00000017560	Srsf6	100	81.633	Nannospalax_galili
ENSFDAG00000012191	SRSF6	94	78.769	ENSNLEG00000006524	SRSF6	94	81.790	Nomascus_leucogenys
ENSFDAG00000012191	SRSF6	82	95.816	ENSOPRG00000002017	-	92	96.218	Ochotona_princeps
ENSFDAG00000012191	SRSF6	82	79.661	ENSOCUG00000009785	-	98	79.661	Oryctolagus_cuniculus
ENSFDAG00000012191	SRSF6	94	76.923	ENSOGAG00000014468	SRSF6	94	79.938	Otolemur_garnettii
ENSFDAG00000012191	SRSF6	93	80.312	ENSOARG00000003117	SRSF6	94	81.056	Ovis_aries
ENSFDAG00000012191	SRSF6	94	76.235	ENSPPAG00000034327	-	94	82.043	Pan_paniscus
ENSFDAG00000012191	SRSF6	89	73.355	ENSPPAG00000043131	-	100	74.013	Pan_paniscus
ENSFDAG00000012191	SRSF6	93	78.086	ENSPPRG00000008917	SRSF6	94	80.556	Panthera_pardus
ENSFDAG00000012191	SRSF6	67	94.872	ENSPTIG00000019153	SRSF6	90	94.872	Panthera_tigris_altaica
ENSFDAG00000012191	SRSF6	89	73.355	ENSPTRG00000046274	-	100	74.013	Pan_troglodytes
ENSFDAG00000012191	SRSF6	94	78.462	ENSPTRG00000044686	-	94	81.481	Pan_troglodytes
ENSFDAG00000012191	SRSF6	78	96.943	ENSPANG00000035224	SRSF6	94	82.099	Papio_anubis
ENSFDAG00000012191	SRSF6	86	57.357	ENSPKIG00000018463	-	67	65.169	Paramormyrops_kingsleyae
ENSFDAG00000012191	SRSF6	86	53.595	ENSPMGG00000014963	srsf6a	55	66.304	Periophthalmus_magnuspinnatus
ENSFDAG00000012191	SRSF6	86	50.314	ENSPLAG00000009243	srsf6a	80	51.969	Poecilia_latipinna
ENSFDAG00000012191	SRSF6	94	78.769	ENSPPYG00000011019	SRSF6	94	81.790	Pongo_abelii
ENSFDAG00000012191	SRSF6	94	78.462	ENSPCOG00000026364	SRSF6	94	81.481	Propithecus_coquereli
ENSFDAG00000012191	SRSF6	93	75.926	ENSPVAG00000015232	SRSF6	94	78.395	Pteropus_vampyrus
ENSFDAG00000012191	SRSF6	93	78.086	ENSRNOG00000006380	Srsf6	95	80.556	Rattus_norvegicus
ENSFDAG00000012191	SRSF6	93	81.388	ENSRBIG00000041414	SRSF6	94	82.759	Rhinopithecus_bieti
ENSFDAG00000012191	SRSF6	93	78.704	ENSRROG00000029989	SRSF6	94	81.481	Rhinopithecus_roxellana
ENSFDAG00000012191	SRSF6	94	78.154	ENSSBOG00000033708	-	94	81.173	Saimiri_boliviensis_boliviensis
ENSFDAG00000012191	SRSF6	92	61.613	ENSSBOG00000034078	-	54	60.694	Saimiri_boliviensis_boliviensis
ENSFDAG00000012191	SRSF6	82	94.958	ENSSARG00000001602	SRSF6	92	94.538	Sorex_araneus
ENSFDAG00000012191	SRSF6	71	48.679	ENSSPAG00000002362	srsf6a	67	64.021	Stegastes_partitus
ENSFDAG00000012191	SRSF6	93	78.086	ENSSSCG00000007362	SRSF6	96	80.277	Sus_scrofa
ENSFDAG00000012191	SRSF6	92	67.077	ENSTGUG00000003455	SRSF6	94	69.909	Taeniopygia_guttata
ENSFDAG00000012191	SRSF6	86	54.125	ENSTNIG00000001692	srsf6a	57	63.978	Tetraodon_nigroviridis
ENSFDAG00000012191	SRSF6	79	94.348	ENSTBEG00000013448	SRSF6	76	94.167	Tupaia_belangeri
ENSFDAG00000012191	SRSF6	80	96.170	ENSTTRG00000015410	SRSF6	92	96.218	Tursiops_truncatus
ENSFDAG00000012191	SRSF6	93	78.086	ENSUAMG00000003559	SRSF6	94	80.556	Ursus_americanus
ENSFDAG00000012191	SRSF6	67	94.872	ENSUMAG00000001154	SRSF6	90	94.872	Ursus_maritimus
ENSFDAG00000012191	SRSF6	89	100.000	ENSVPAG00000003016	SRSF6	77	100.000	Vicugna_pacos