EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000012323 (Gene tree)
Gene ID: 104871193
Gene Symbol: ZC3H13
Alias: DKFZp434D1812|KIAA0853|Xio
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 68465 bases
Position: chrKN122849.1:5509274-5577738
Accession: 104871193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000002660	zf-CCCH	PF00642.24	4.8e-07	1	1
ENSFDAP00000002637	zf-CCCH	PF00642.24	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000016421	ZC3H13-201	4980	-	ENSFDAP00000002637	1659 (aa)	-	-
ENSFDAT00000016435	ZC3H13-202	5945	XM_010637035	ENSFDAP00000002660	1651 (aa)	XP_010635337	-

Gene Model

Click here to download ENSFDAG00000012323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012323	ZC3H13	94	77.825	ENSAPLG00000002707	ZC3H13	66	78.765	Anas_platyrhynchos
ENSFDAG00000012323	ZC3H13	52	88.497	ENSCPOG00000000646	ZC3H13	53	87.816	Cavia_porcellus
ENSFDAG00000012323	ZC3H13	52	88.470	ENSCLAG00000000610	ZC3H13	53	88.014	Chinchilla_lanigera
ENSFDAG00000012323	ZC3H13	87	93.805	ENSCHOG00000009724	ZC3H13	87	93.805	Choloepus_hoffmanni
ENSFDAG00000012323	ZC3H13	52	81.456	ENSDNOG00000005390	ZC3H13	53	80.774	Dasypus_novemcinctus
ENSFDAG00000012323	ZC3H13	52	84.091	ENSEASG00005017100	ZC3H13	52	84.869	Equus_asinus_asinus
ENSFDAG00000012323	ZC3H13	52	84.414	ENSECAG00000022843	ZC3H13	54	84.396	Equus_caballus
ENSFDAG00000012323	ZC3H13	52	82.086	ENSFCAG00000004877	ZC3H13	52	82.426	Felis_catus
ENSFDAG00000012323	ZC3H13	85	51.501	ENSGACG00000015166	zc3h13	72	54.006	Gasterosteus_aculeatus
ENSFDAG00000012323	ZC3H13	52	92.045	ENSHGLG00000006309	ZC3H13	53	92.045	Heterocephalus_glaber_female
ENSFDAG00000012323	ZC3H13	54	88.864	ENSHGLG00100007460	ZC3H13	50	94.344	Heterocephalus_glaber_male
ENSFDAG00000012323	ZC3H13	52	83.034	ENSSTOG00000029682	ZC3H13	53	83.429	Ictidomys_tridecemlineatus
ENSFDAG00000012323	ZC3H13	52	82.204	ENSJJAG00000019971	Zc3h13	53	82.265	Jaculus_jaculus
ENSFDAG00000012323	ZC3H13	68	64.388	ENSKMAG00000010701	zc3h13	77	45.055	Kryptolebias_marmoratus
ENSFDAG00000012323	ZC3H13	63	65.090	ENSLACG00000003806	ZC3H13	57	66.013	Latimeria_chalumnae
ENSFDAG00000012323	ZC3H13	52	68.078	ENSMGAG00000014996	ZC3H13	51	67.779	Meleagris_gallopavo
ENSFDAG00000012323	ZC3H13	52	81.746	ENSMPUG00000001602	ZC3H13	52	81.519	Mustela_putorius_furo
ENSFDAG00000012323	ZC3H13	52	89.269	ENSODEG00000005178	ZC3H13	53	88.813	Octodon_degus
ENSFDAG00000012323	ZC3H13	52	84.073	ENSOCUG00000015173	ZC3H13	53	82.529	Oryctolagus_cuniculus
ENSFDAG00000012323	ZC3H13	68	59.091	ENSOMEG00000007044	zc3h13	71	46.416	Oryzias_melastigma
ENSFDAG00000012323	ZC3H13	51	80.161	ENSPTIG00000014867	ZC3H13	53	80.161	Panthera_tigris_altaica
ENSFDAG00000012323	ZC3H13	78	95.968	ENSPCAG00000001146	ZC3H13	77	93.952	Procavia_capensis
ENSFDAG00000012323	ZC3H13	70	83.710	ENSPVAG00000012353	ZC3H13	69	82.956	Pteropus_vampyrus
ENSFDAG00000012323	ZC3H13	52	93.220	ENSSARG00000007106	ZC3H13	50	93.220	Sorex_araneus
ENSFDAG00000012323	ZC3H13	52	80.687	ENSSPUG00000013358	ZC3H13	60	80.687	Sphenodon_punctatus
ENSFDAG00000012323	ZC3H13	88	52.601	ENSTNIG00000014523	zc3h13	67	52.359	Tetraodon_nigroviridis
ENSFDAG00000012323	ZC3H13	84	89.091	ENSVPAG00000005179	ZC3H13	84	89.091	Vicugna_pacos
ENSFDAG00000012323	ZC3H13	93	59.763	ENSXETG00000014637	zc3h13	97	58.953	Xenopus_tropicalis