EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000012518 (Gene tree)
Gene ID: 104848364
Gene Symbol: PUS1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 6487 bases
Position: chrKN123762.1:4570769-4577255
Accession: 104848364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000002938	PseudoU_synth_1	PF01416.20	4.2e-15	1	1
ENSFDAP00000002947	PseudoU_synth_1	PF01416.20	6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000016689	PUS1-202	1233	XM_010604256	ENSFDAP00000002938	410 (aa)	XP_010602558	-
ENSFDAT00000016682	PUS1-201	1248	XM_010604257	ENSFDAP00000002947	415 (aa)	XP_010602559	-

Gene Model

Click here to download ENSFDAG00000012518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012518	PUS1	98	80.569	ENSG00000177192	PUS1	93	87.535	Homo_sapiens
ENSFDAG00000012518	PUS1	87	66.759	ENSAPOG00000007254	pus1	86	66.759	Acanthochromis_polyacanthus
ENSFDAG00000012518	PUS1	100	78.095	ENSAMEG00000013715	PUS1	100	77.590	Ailuropoda_melanoleuca
ENSFDAG00000012518	PUS1	83	70.588	ENSACIG00000009169	pus1	82	70.588	Amphilophus_citrinellus
ENSFDAG00000012518	PUS1	87	68.421	ENSAOCG00000022207	pus1	86	68.421	Amphiprion_ocellaris
ENSFDAG00000012518	PUS1	87	68.421	ENSAPEG00000006039	pus1	92	68.421	Amphiprion_percula
ENSFDAG00000012518	PUS1	81	71.687	ENSATEG00000020688	pus1	85	71.687	Anabas_testudineus
ENSFDAG00000012518	PUS1	84	77.457	ENSACAG00000007367	PUS1	93	77.457	Anolis_carolinensis
ENSFDAG00000012518	PUS1	79	88.272	ENSANAG00000036192	PUS1	99	88.308	Aotus_nancymaae
ENSFDAG00000012518	PUS1	85	67.989	ENSACLG00000020868	pus1	90	67.989	Astatotilapia_calliptera
ENSFDAG00000012518	PUS1	98	63.772	ENSAMXG00000008710	pus1	84	68.120	Astyanax_mexicanus
ENSFDAG00000012518	PUS1	92	84.031	ENSBTAG00000012990	PUS1	94	84.615	Bos_taurus
ENSFDAG00000012518	PUS1	81	37.464	WBGene00004248	pus-1	82	37.464	Caenorhabditis_elegans
ENSFDAG00000012518	PUS1	62	90.551	ENSCJAG00000003720	PUS1	74	88.192	Callithrix_jacchus
ENSFDAG00000012518	PUS1	99	76.267	ENSCAFG00000006429	PUS1	93	83.019	Canis_familiaris
ENSFDAG00000012518	PUS1	99	76.334	ENSCAFG00020010737	PUS1	100	75.870	Canis_lupus_dingo
ENSFDAG00000012518	PUS1	98	81.327	ENSCHIG00000000487	PUS1	94	84.881	Capra_hircus
ENSFDAG00000012518	PUS1	90	85.095	ENSTSYG00000032605	PUS1	99	85.908	Carlito_syrichta
ENSFDAG00000012518	PUS1	79	92.260	ENSCAPG00000006421	PUS1	100	92.260	Cavia_aperea
ENSFDAG00000012518	PUS1	100	86.417	ENSCPOG00000001027	PUS1	100	86.651	Cavia_porcellus
ENSFDAG00000012518	PUS1	100	77.726	ENSCCAG00000015879	PUS1	90	88.344	Cebus_capucinus
ENSFDAG00000012518	PUS1	98	79.810	ENSCATG00000032870	PUS1	89	88.957	Cercocebus_atys
ENSFDAG00000012518	PUS1	100	89.623	ENSCLAG00000011689	PUS1	100	87.736	Chinchilla_lanigera
ENSFDAG00000012518	PUS1	98	80.523	ENSCSAG00000001879	PUS1	98	79.572	Chlorocebus_sabaeus
ENSFDAG00000012518	PUS1	77	81.013	ENSCPBG00000024715	PUS1	93	79.268	Chrysemys_picta_bellii
ENSFDAG00000012518	PUS1	83	43.402	ENSCING00000009426	-	91	43.402	Ciona_intestinalis
ENSFDAG00000012518	PUS1	79	43.789	ENSCSAVG00000003751	-	66	43.789	Ciona_savignyi
ENSFDAG00000012518	PUS1	95	73.317	ENSCANG00000035561	PUS1	89	80.243	Colobus_angolensis_palliatus
ENSFDAG00000012518	PUS1	100	83.688	ENSCGRG00001019592	Pus1	99	82.742	Cricetulus_griseus_chok1gshd
ENSFDAG00000012518	PUS1	100	83.688	ENSCGRG00000004048	Pus1	94	87.936	Cricetulus_griseus_crigri
ENSFDAG00000012518	PUS1	90	64.439	ENSCSEG00000003629	pus1	80	68.732	Cynoglossus_semilaevis
ENSFDAG00000012518	PUS1	86	69.296	ENSCVAG00000001265	pus1	85	69.296	Cyprinodon_variegatus
ENSFDAG00000012518	PUS1	89	63.934	ENSDARG00000045562	pus1	95	68.182	Danio_rerio
ENSFDAG00000012518	PUS1	99	71.991	ENSDNOG00000045576	PUS1	98	83.282	Dasypus_novemcinctus
ENSFDAG00000012518	PUS1	79	90.741	ENSDORG00000011455	Pus1	99	90.769	Dipodomys_ordii
ENSFDAG00000012518	PUS1	84	46.418	FBgn0038811	PUS1	84	46.418	Drosophila_melanogaster
ENSFDAG00000012518	PUS1	84	81.977	ENSETEG00000019160	PUS1	86	81.020	Echinops_telfairi
ENSFDAG00000012518	PUS1	80	43.099	ENSEBUG00000000368	-	66	43.099	Eptatretus_burgeri
ENSFDAG00000012518	PUS1	100	79.861	ENSEASG00005016535	PUS1	99	78.935	Equus_asinus_asinus
ENSFDAG00000012518	PUS1	94	83.376	ENSECAG00000006965	PUS1	93	86.022	Equus_caballus
ENSFDAG00000012518	PUS1	88	68.975	ENSELUG00000010424	pus1	91	68.975	Esox_lucius
ENSFDAG00000012518	PUS1	99	76.942	ENSFCAG00000010780	PUS1	87	81.769	Felis_catus
ENSFDAG00000012518	PUS1	90	75.538	ENSFALG00000008273	PUS1	87	75.538	Ficedula_albicollis
ENSFDAG00000012518	PUS1	90	64.894	ENSFHEG00000010504	pus1	84	69.364	Fundulus_heteroclitus
ENSFDAG00000012518	PUS1	81	68.862	ENSGMOG00000008143	pus1	86	68.862	Gadus_morhua
ENSFDAG00000012518	PUS1	97	73.067	ENSGALG00000002354	PUS1	98	73.067	Gallus_gallus
ENSFDAG00000012518	PUS1	91	66.223	ENSGAFG00000006578	pus1	88	67.120	Gambusia_affinis
ENSFDAG00000012518	PUS1	90	66.304	ENSGACG00000017566	pus1	94	66.304	Gasterosteus_aculeatus
ENSFDAG00000012518	PUS1	80	78.182	ENSGAGG00000016730	-	94	78.182	Gopherus_agassizii
ENSFDAG00000012518	PUS1	98	79.810	ENSGGOG00000009178	PUS1	98	78.622	Gorilla_gorilla
ENSFDAG00000012518	PUS1	85	68.272	ENSHBUG00000001316	pus1	90	68.272	Haplochromis_burtoni
ENSFDAG00000012518	PUS1	92	92.553	ENSHGLG00000016086	PUS1	95	92.742	Heterocephalus_glaber_female
ENSFDAG00000012518	PUS1	92	92.287	ENSHGLG00100019362	PUS1	95	92.473	Heterocephalus_glaber_male
ENSFDAG00000012518	PUS1	80	71.429	ENSHCOG00000014288	pus1	76	71.429	Hippocampus_comes
ENSFDAG00000012518	PUS1	89	69.945	ENSIPUG00000010387	pus1	86	72.674	Ictalurus_punctatus
ENSFDAG00000012518	PUS1	98	86.747	ENSSTOG00000011245	PUS1	99	85.343	Ictidomys_tridecemlineatus
ENSFDAG00000012518	PUS1	100	83.412	ENSJJAG00000000088	Pus1	99	83.412	Jaculus_jaculus
ENSFDAG00000012518	PUS1	98	61.557	ENSKMAG00000012702	pus1	85	67.967	Kryptolebias_marmoratus
ENSFDAG00000012518	PUS1	87	67.500	ENSLBEG00000002845	pus1	88	67.500	Labrus_bergylta
ENSFDAG00000012518	PUS1	78	58.255	ENSLACG00000016044	-	97	58.255	Latimeria_chalumnae
ENSFDAG00000012518	PUS1	86	75.354	ENSLACG00000018598	PUS1	90	75.000	Latimeria_chalumnae
ENSFDAG00000012518	PUS1	94	69.744	ENSLOCG00000006127	pus1	91	73.425	Lepisosteus_oculatus
ENSFDAG00000012518	PUS1	90	78.284	ENSLAFG00000028731	PUS1	100	78.284	Loxodonta_africana
ENSFDAG00000012518	PUS1	94	83.163	ENSMFAG00000041194	PUS1	89	89.264	Macaca_fascicularis
ENSFDAG00000012518	PUS1	96	80.583	ENSMMUG00000031463	PUS1	93	86.944	Macaca_mulatta
ENSFDAG00000012518	PUS1	98	80.048	ENSMNEG00000002814	PUS1	89	89.264	Macaca_nemestrina
ENSFDAG00000012518	PUS1	79	89.506	ENSMLEG00000043560	PUS1	99	89.506	Mandrillus_leucophaeus
ENSFDAG00000012518	PUS1	88	64.343	ENSMAMG00000007371	pus1	89	64.343	Mastacembelus_armatus
ENSFDAG00000012518	PUS1	85	68.272	ENSMZEG00005017746	pus1	84	68.272	Maylandia_zebra
ENSFDAG00000012518	PUS1	79	79.331	ENSMGAG00000001958	PUS1	100	79.331	Meleagris_gallopavo
ENSFDAG00000012518	PUS1	100	85.343	ENSMAUG00000001482	Pus1	99	84.397	Mesocricetus_auratus
ENSFDAG00000012518	PUS1	98	80.378	ENSMICG00000030980	PUS1	93	85.146	Microcebus_murinus
ENSFDAG00000012518	PUS1	100	84.161	ENSMOCG00000022311	Pus1	99	83.215	Microtus_ochrogaster
ENSFDAG00000012518	PUS1	89	68.033	ENSMMOG00000021022	pus1	93	68.033	Mola_mola
ENSFDAG00000012518	PUS1	96	70.813	ENSMODG00000015551	PUS1	83	77.358	Monodelphis_domestica
ENSFDAG00000012518	PUS1	86	66.856	ENSMALG00000013202	pus1	85	66.856	Monopterus_albus
ENSFDAG00000012518	PUS1	100	84.634	MGP_CAROLIEiJ_G0027551	Pus1	99	83.688	Mus_caroli
ENSFDAG00000012518	PUS1	100	84.397	ENSMUSG00000029507	Pus1	94	88.472	Mus_musculus
ENSFDAG00000012518	PUS1	100	84.161	MGP_PahariEiJ_G0024133	Pus1	99	83.452	Mus_pahari
ENSFDAG00000012518	PUS1	100	84.397	MGP_SPRETEiJ_G0028549	Pus1	94	88.472	Mus_spretus
ENSFDAG00000012518	PUS1	94	81.633	ENSMPUG00000002314	PUS1	94	83.069	Mustela_putorius_furo
ENSFDAG00000012518	PUS1	85	86.932	ENSMLUG00000015790	PUS1	96	86.932	Myotis_lucifugus
ENSFDAG00000012518	PUS1	100	83.215	ENSNGAG00000012976	Pus1	99	82.742	Nannospalax_galili
ENSFDAG00000012518	PUS1	85	68.678	ENSNBRG00000020502	pus1	94	68.376	Neolamprologus_brichardi
ENSFDAG00000012518	PUS1	91	84.000	ENSNLEG00000008505	PUS1	99	89.524	Nomascus_leucogenys
ENSFDAG00000012518	PUS1	90	68.194	ENSMEUG00000002825	PUS1	94	70.455	Notamacropus_eugenii
ENSFDAG00000012518	PUS1	90	75.472	ENSOPRG00000002701	-	92	78.063	Ochotona_princeps
ENSFDAG00000012518	PUS1	90	92.391	ENSODEG00000008248	PUS1	93	93.768	Octodon_degus
ENSFDAG00000012518	PUS1	84	67.324	ENSONIG00000003803	pus1	86	71.803	Oreochromis_niloticus
ENSFDAG00000012518	PUS1	88	76.519	ENSOANG00000010619	PUS1	86	74.866	Ornithorhynchus_anatinus
ENSFDAG00000012518	PUS1	89	85.523	ENSOCUG00000007310	PUS1	80	85.484	Oryctolagus_cuniculus
ENSFDAG00000012518	PUS1	88	67.391	ENSORLG00000010787	pus1	88	67.391	Oryzias_latipes
ENSFDAG00000012518	PUS1	85	69.296	ENSORLG00020011483	pus1	85	69.296	Oryzias_latipes_hni
ENSFDAG00000012518	PUS1	88	67.935	ENSORLG00015023012	pus1	94	67.935	Oryzias_latipes_hsok
ENSFDAG00000012518	PUS1	88	68.232	ENSOMEG00000022655	pus1	85	68.232	Oryzias_melastigma
ENSFDAG00000012518	PUS1	92	85.117	ENSOGAG00000008720	PUS1	98	86.016	Otolemur_garnettii
ENSFDAG00000012518	PUS1	92	83.770	ENSOARG00000013316	PUS1	99	77.136	Ovis_aries
ENSFDAG00000012518	PUS1	98	81.235	ENSPPAG00000040971	PUS1	98	79.810	Pan_paniscus
ENSFDAG00000012518	PUS1	95	79.293	ENSPPRG00000015456	PUS1	94	81.217	Panthera_pardus
ENSFDAG00000012518	PUS1	84	84.348	ENSPTIG00000004201	PUS1	91	84.286	Panthera_tigris_altaica
ENSFDAG00000012518	PUS1	98	80.523	ENSPTRG00000005643	PUS1	98	79.097	Pan_troglodytes
ENSFDAG00000012518	PUS1	98	79.810	ENSPANG00000000376	PUS1	89	88.957	Papio_anubis
ENSFDAG00000012518	PUS1	80	75.305	ENSPKIG00000019369	pus1	78	72.701	Paramormyrops_kingsleyae
ENSFDAG00000012518	PUS1	89	77.410	ENSPSIG00000016432	PUS1	82	78.592	Pelodiscus_sinensis
ENSFDAG00000012518	PUS1	80	70.821	ENSPMGG00000004522	pus1	87	70.492	Periophthalmus_magnuspinnatus
ENSFDAG00000012518	PUS1	100	85.545	ENSPEMG00000013448	Pus1	99	85.308	Peromyscus_maniculatus_bairdii
ENSFDAG00000012518	PUS1	80	60.856	ENSPMAG00000004636	pus1	99	60.856	Petromyzon_marinus
ENSFDAG00000012518	PUS1	70	71.626	ENSPCIG00000022609	-	74	67.949	Phascolarctos_cinereus
ENSFDAG00000012518	PUS1	88	67.218	ENSPFOG00000019669	pus1	84	68.169	Poecilia_formosa
ENSFDAG00000012518	PUS1	88	67.218	ENSPLAG00000007185	pus1	84	68.169	Poecilia_latipinna
ENSFDAG00000012518	PUS1	88	67.218	ENSPLAG00000002692	-	84	68.169	Poecilia_latipinna
ENSFDAG00000012518	PUS1	88	67.218	ENSPMEG00000011115	PUS1	85	68.169	Poecilia_mexicana
ENSFDAG00000012518	PUS1	88	67.218	ENSPMEG00000006038	pus1	87	68.169	Poecilia_mexicana
ENSFDAG00000012518	PUS1	88	66.849	ENSPREG00000007231	pus1	93	70.118	Poecilia_reticulata
ENSFDAG00000012518	PUS1	98	80.622	ENSPPYG00000005132	PUS1	98	79.475	Pongo_abelii
ENSFDAG00000012518	PUS1	64	77.947	ENSPCAG00000009110	-	64	77.947	Procavia_capensis
ENSFDAG00000012518	PUS1	94	75.827	ENSPCOG00000015595	PUS1	100	74.820	Propithecus_coquereli
ENSFDAG00000012518	PUS1	85	67.989	ENSPNYG00000013571	pus1	84	67.989	Pundamilia_nyererei
ENSFDAG00000012518	PUS1	89	69.505	ENSPNAG00000003938	pus1	84	70.391	Pygocentrus_nattereri
ENSFDAG00000012518	PUS1	100	84.161	ENSRNOG00000037500	Pus1	99	83.688	Rattus_norvegicus
ENSFDAG00000012518	PUS1	94	82.653	ENSRBIG00000043177	PUS1	91	88.344	Rhinopithecus_bieti
ENSFDAG00000012518	PUS1	98	79.097	ENSRROG00000039744	PUS1	89	87.748	Rhinopithecus_roxellana
ENSFDAG00000012518	PUS1	74	30.081	YGL063W	-	97	30.081	Saccharomyces_cerevisiae
ENSFDAG00000012518	PUS1	79	43.382	YPL212C	-	59	43.382	Saccharomyces_cerevisiae
ENSFDAG00000012518	PUS1	94	83.120	ENSSBOG00000023593	PUS1	93	89.164	Saimiri_boliviensis_boliviensis
ENSFDAG00000012518	PUS1	95	73.485	ENSSHAG00000013193	PUS1	89	75.956	Sarcophilus_harrisii
ENSFDAG00000012518	PUS1	89	70.789	ENSSFOG00015003463	pus1	85	71.316	Scleropages_formosus
ENSFDAG00000012518	PUS1	83	68.824	ENSSMAG00000019075	pus1	82	68.300	Scophthalmus_maximus
ENSFDAG00000012518	PUS1	87	68.421	ENSSDUG00000007102	pus1	86	68.421	Seriola_dumerili
ENSFDAG00000012518	PUS1	87	67.867	ENSSLDG00000022850	pus1	86	67.867	Seriola_lalandi_dorsalis
ENSFDAG00000012518	PUS1	74	77.303	ENSSARG00000008367	PUS1	98	77.303	Sorex_araneus
ENSFDAG00000012518	PUS1	90	75.068	ENSSPUG00000010009	PUS1	92	75.068	Sphenodon_punctatus
ENSFDAG00000012518	PUS1	91	66.223	ENSSPAG00000006272	pus1	92	67.867	Stegastes_partitus
ENSFDAG00000012518	PUS1	100	77.367	ENSSSCG00000009741	PUS1	94	84.350	Sus_scrofa
ENSFDAG00000012518	PUS1	80	81.212	ENSTGUG00000008068	PUS1	100	81.212	Taeniopygia_guttata
ENSFDAG00000012518	PUS1	90	65.041	ENSTRUG00000002198	pus1	93	65.934	Takifugu_rubripes
ENSFDAG00000012518	PUS1	86	67.403	ENSTNIG00000003942	pus1	92	67.680	Tetraodon_nigroviridis
ENSFDAG00000012518	PUS1	98	78.251	ENSTTRG00000000632	PUS1	88	84.677	Tursiops_truncatus
ENSFDAG00000012518	PUS1	94	80.612	ENSUAMG00000017197	PUS1	93	82.842	Ursus_americanus
ENSFDAG00000012518	PUS1	90	82.796	ENSUMAG00000002831	PUS1	100	86.607	Ursus_maritimus
ENSFDAG00000012518	PUS1	89	83.740	ENSVVUG00000004199	PUS1	84	83.967	Vulpes_vulpes
ENSFDAG00000012518	PUS1	78	49.221	ENSXETG00000033640	-	100	49.221	Xenopus_tropicalis
ENSFDAG00000012518	PUS1	80	75.758	ENSXETG00000002030	pus1	83	75.758	Xenopus_tropicalis
ENSFDAG00000012518	PUS1	91	65.867	ENSXCOG00000004722	pus1	95	66.757	Xiphophorus_couchianus
ENSFDAG00000012518	PUS1	88	67.493	ENSXMAG00000000988	pus1	88	66.033	Xiphophorus_maculatus