EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000012582 (Gene tree)
Gene ID: 104863956
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 46245 bases
Position: chrKN120660.1:2107932-2154176
Accession: 104863956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000003055	FDF	PF09532.10	2.9e-16	1	1
ENSFDAP00000003055	LSM14	PF12701.7	5.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000016781	EDC3-201	2418	XM_010626661	ENSFDAP00000003055	508 (aa)	XP_010624963	A0A091E5W0

Gene Model

Click here to download ENSFDAG00000012582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012582's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012582	EDC3	100	95.079	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSFDAG00000012582	EDC3	100	56.117	ENSAPOG00000008655	EDC3	100	56.117	Acanthochromis_polyacanthus
ENSFDAG00000012582	EDC3	100	70.000	ENSAPOG00000010791	edc3	100	70.000	Acanthochromis_polyacanthus
ENSFDAG00000012582	EDC3	100	94.882	ENSAMEG00000008963	EDC3	100	94.882	Ailuropoda_melanoleuca
ENSFDAG00000012582	EDC3	100	68.959	ENSACIG00000017751	edc3	100	68.959	Amphilophus_citrinellus
ENSFDAG00000012582	EDC3	99	59.302	ENSACIG00000005330	EDC3	99	59.302	Amphilophus_citrinellus
ENSFDAG00000012582	EDC3	100	70.000	ENSAOCG00000005431	edc3	100	70.000	Amphiprion_ocellaris
ENSFDAG00000012582	EDC3	100	58.447	ENSAOCG00000009103	-	100	58.447	Amphiprion_ocellaris
ENSFDAG00000012582	EDC3	100	70.000	ENSAPEG00000000968	edc3	100	70.000	Amphiprion_percula
ENSFDAG00000012582	EDC3	100	58.252	ENSAPEG00000007841	EDC3	100	58.252	Amphiprion_percula
ENSFDAG00000012582	EDC3	100	57.500	ENSATEG00000004205	-	100	57.500	Anabas_testudineus
ENSFDAG00000012582	EDC3	100	70.334	ENSATEG00000015505	edc3	100	70.334	Anabas_testudineus
ENSFDAG00000012582	EDC3	90	85.934	ENSAPLG00000008957	EDC3	100	85.934	Anas_platyrhynchos
ENSFDAG00000012582	EDC3	78	86.398	ENSACAG00000000460	-	100	86.398	Anolis_carolinensis
ENSFDAG00000012582	EDC3	100	95.276	ENSANAG00000024078	EDC3	100	95.276	Aotus_nancymaae
ENSFDAG00000012582	EDC3	100	68.369	ENSACLG00000007232	edc3	100	68.369	Astatotilapia_calliptera
ENSFDAG00000012582	EDC3	99	58.594	ENSACLG00000018776	-	100	58.480	Astatotilapia_calliptera
ENSFDAG00000012582	EDC3	100	70.817	ENSAMXG00000001589	edc3	100	70.817	Astyanax_mexicanus
ENSFDAG00000012582	EDC3	100	93.898	ENSBTAG00000007308	EDC3	100	93.898	Bos_taurus
ENSFDAG00000012582	EDC3	100	95.472	ENSCJAG00000017681	EDC3	100	95.472	Callithrix_jacchus
ENSFDAG00000012582	EDC3	100	94.882	ENSCAFG00000017935	EDC3	100	94.882	Canis_familiaris
ENSFDAG00000012582	EDC3	100	94.882	ENSCAFG00020003909	EDC3	100	94.882	Canis_lupus_dingo
ENSFDAG00000012582	EDC3	100	94.488	ENSCHIG00000023658	EDC3	100	94.488	Capra_hircus
ENSFDAG00000012582	EDC3	100	94.488	ENSTSYG00000004822	EDC3	100	94.488	Carlito_syrichta
ENSFDAG00000012582	EDC3	100	96.850	ENSCPOG00000015595	EDC3	100	96.850	Cavia_porcellus
ENSFDAG00000012582	EDC3	100	95.669	ENSCCAG00000021663	EDC3	100	95.669	Cebus_capucinus
ENSFDAG00000012582	EDC3	100	96.260	ENSCATG00000037511	EDC3	100	96.260	Cercocebus_atys
ENSFDAG00000012582	EDC3	100	97.047	ENSCLAG00000005700	EDC3	100	97.047	Chinchilla_lanigera
ENSFDAG00000012582	EDC3	100	96.260	ENSCSAG00000014239	EDC3	100	96.260	Chlorocebus_sabaeus
ENSFDAG00000012582	EDC3	100	87.795	ENSCPBG00000024239	EDC3	100	87.795	Chrysemys_picta_bellii
ENSFDAG00000012582	EDC3	100	38.889	ENSCING00000022142	-	99	38.889	Ciona_intestinalis
ENSFDAG00000012582	EDC3	100	96.260	ENSCANG00000028699	EDC3	100	96.260	Colobus_angolensis_palliatus
ENSFDAG00000012582	EDC3	100	95.276	ENSCGRG00001013874	Edc3	100	95.276	Cricetulus_griseus_chok1gshd
ENSFDAG00000012582	EDC3	100	95.276	ENSCGRG00000011885	Edc3	100	95.276	Cricetulus_griseus_crigri
ENSFDAG00000012582	EDC3	99	69.882	ENSCSEG00000012996	edc3	99	69.882	Cynoglossus_semilaevis
ENSFDAG00000012582	EDC3	100	68.566	ENSCVAG00000008023	edc3	100	68.566	Cyprinodon_variegatus
ENSFDAG00000012582	EDC3	99	68.431	ENSDARG00000051931	edc3	99	68.431	Danio_rerio
ENSFDAG00000012582	EDC3	100	84.884	ENSDNOG00000030661	EDC3	100	84.884	Dasypus_novemcinctus
ENSFDAG00000012582	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSFDAG00000012582	EDC3	100	95.079	ENSEASG00005005071	EDC3	100	95.079	Equus_asinus_asinus
ENSFDAG00000012582	EDC3	100	95.079	ENSECAG00000017994	EDC3	100	95.079	Equus_caballus
ENSFDAG00000012582	EDC3	100	61.748	ENSELUG00000007607	EDC3	100	61.748	Esox_lucius
ENSFDAG00000012582	EDC3	100	65.692	ENSELUG00000005794	edc3	100	65.692	Esox_lucius
ENSFDAG00000012582	EDC3	100	94.685	ENSFCAG00000002014	EDC3	100	94.685	Felis_catus
ENSFDAG00000012582	EDC3	98	84.369	ENSFALG00000004543	EDC3	96	84.369	Ficedula_albicollis
ENSFDAG00000012582	EDC3	100	69.608	ENSFHEG00000009375	edc3	100	69.608	Fundulus_heteroclitus
ENSFDAG00000012582	EDC3	100	68.359	ENSGMOG00000002715	edc3	100	68.359	Gadus_morhua
ENSFDAG00000012582	EDC3	100	87.598	ENSGALG00000040181	EDC3	100	87.598	Gallus_gallus
ENSFDAG00000012582	EDC3	100	67.780	ENSGAFG00000014433	edc3	100	67.843	Gambusia_affinis
ENSFDAG00000012582	EDC3	100	68.566	ENSGACG00000009783	edc3	100	68.566	Gasterosteus_aculeatus
ENSFDAG00000012582	EDC3	99	55.642	ENSGACG00000014671	EDC3	99	56.311	Gasterosteus_aculeatus
ENSFDAG00000012582	EDC3	100	87.402	ENSGAGG00000023477	EDC3	100	87.402	Gopherus_agassizii
ENSFDAG00000012582	EDC3	100	95.276	ENSGGOG00000003552	EDC3	100	95.276	Gorilla_gorilla
ENSFDAG00000012582	EDC3	99	58.594	ENSHBUG00000020817	EDC3	99	58.594	Haplochromis_burtoni
ENSFDAG00000012582	EDC3	100	68.369	ENSHBUG00000003635	edc3	100	68.369	Haplochromis_burtoni
ENSFDAG00000012582	EDC3	100	68.164	ENSHCOG00000016834	edc3	100	68.297	Hippocampus_comes
ENSFDAG00000012582	EDC3	99	70.254	ENSIPUG00000005695	edc3	100	70.254	Ictalurus_punctatus
ENSFDAG00000012582	EDC3	100	94.882	ENSSTOG00000013936	EDC3	100	94.882	Ictidomys_tridecemlineatus
ENSFDAG00000012582	EDC3	100	93.110	ENSJJAG00000008074	Edc3	100	93.110	Jaculus_jaculus
ENSFDAG00000012582	EDC3	100	56.299	ENSKMAG00000001987	EDC3	100	56.299	Kryptolebias_marmoratus
ENSFDAG00000012582	EDC3	100	69.155	ENSKMAG00000001243	edc3	100	69.080	Kryptolebias_marmoratus
ENSFDAG00000012582	EDC3	100	58.641	ENSLBEG00000017984	EDC3	100	58.641	Labrus_bergylta
ENSFDAG00000012582	EDC3	100	69.608	ENSLBEG00000013435	edc3	99	69.608	Labrus_bergylta
ENSFDAG00000012582	EDC3	100	76.311	ENSLACG00000014149	EDC3	100	76.311	Latimeria_chalumnae
ENSFDAG00000012582	EDC3	99	67.578	ENSLOCG00000014625	edc3	99	67.641	Lepisosteus_oculatus
ENSFDAG00000012582	EDC3	100	92.717	ENSLAFG00000002992	EDC3	100	92.717	Loxodonta_africana
ENSFDAG00000012582	EDC3	100	95.866	ENSMFAG00000043074	EDC3	100	95.866	Macaca_fascicularis
ENSFDAG00000012582	EDC3	100	95.866	ENSMMUG00000011071	EDC3	100	95.866	Macaca_mulatta
ENSFDAG00000012582	EDC3	100	95.866	ENSMNEG00000035316	EDC3	100	95.866	Macaca_nemestrina
ENSFDAG00000012582	EDC3	100	96.260	ENSMLEG00000030372	EDC3	100	96.260	Mandrillus_leucophaeus
ENSFDAG00000012582	EDC3	100	69.745	ENSMAMG00000000505	edc3	100	69.745	Mastacembelus_armatus
ENSFDAG00000012582	EDC3	99	56.641	ENSMAMG00000005423	-	99	56.641	Mastacembelus_armatus
ENSFDAG00000012582	EDC3	99	59.766	ENSMZEG00005005654	EDC3	100	59.649	Maylandia_zebra
ENSFDAG00000012582	EDC3	100	68.369	ENSMZEG00005004892	edc3	100	68.369	Maylandia_zebra
ENSFDAG00000012582	EDC3	100	86.614	ENSMGAG00000002617	EDC3	100	86.614	Meleagris_gallopavo
ENSFDAG00000012582	EDC3	100	94.488	ENSMICG00000043190	EDC3	100	94.488	Microcebus_murinus
ENSFDAG00000012582	EDC3	100	95.079	ENSMOCG00000016205	Edc3	100	95.079	Microtus_ochrogaster
ENSFDAG00000012582	EDC3	99	69.352	ENSMMOG00000012278	edc3	99	69.488	Mola_mola
ENSFDAG00000012582	EDC3	100	90.551	ENSMODG00000009442	EDC3	100	90.551	Monodelphis_domestica
ENSFDAG00000012582	EDC3	100	69.941	ENSMALG00000008658	edc3	100	69.941	Monopterus_albus
ENSFDAG00000012582	EDC3	100	94.488	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSFDAG00000012582	EDC3	100	94.291	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSFDAG00000012582	EDC3	100	94.685	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSFDAG00000012582	EDC3	100	94.094	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSFDAG00000012582	EDC3	100	94.488	ENSMPUG00000017293	EDC3	100	94.488	Mustela_putorius_furo
ENSFDAG00000012582	EDC3	100	94.314	ENSMLUG00000016382	EDC3	100	94.314	Myotis_lucifugus
ENSFDAG00000012582	EDC3	100	93.898	ENSNGAG00000010923	Edc3	100	93.898	Nannospalax_galili
ENSFDAG00000012582	EDC3	99	58.789	ENSNBRG00000007881	EDC3	99	58.789	Neolamprologus_brichardi
ENSFDAG00000012582	EDC3	100	68.173	ENSNBRG00000002434	edc3	100	68.173	Neolamprologus_brichardi
ENSFDAG00000012582	EDC3	100	85.827	ENSNLEG00000014577	EDC3	100	85.827	Nomascus_leucogenys
ENSFDAG00000012582	EDC3	100	89.567	ENSMEUG00000009077	EDC3	100	89.567	Notamacropus_eugenii
ENSFDAG00000012582	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSFDAG00000012582	EDC3	100	68.566	ENSONIG00000008434	edc3	100	68.566	Oreochromis_niloticus
ENSFDAG00000012582	EDC3	100	59.533	ENSONIG00000002932	-	100	59.533	Oreochromis_niloticus
ENSFDAG00000012582	EDC3	78	90.680	ENSOCUG00000017740	EDC3	86	90.680	Oryctolagus_cuniculus
ENSFDAG00000012582	EDC3	100	68.173	ENSORLG00000004883	edc3	100	68.173	Oryzias_latipes
ENSFDAG00000012582	EDC3	100	56.641	ENSORLG00000014399	-	98	56.641	Oryzias_latipes
ENSFDAG00000012582	EDC3	100	67.583	ENSORLG00020012262	edc3	100	67.583	Oryzias_latipes_hni
ENSFDAG00000012582	EDC3	100	56.641	ENSORLG00020019446	-	100	56.641	Oryzias_latipes_hni
ENSFDAG00000012582	EDC3	100	56.250	ENSORLG00015017635	-	96	56.250	Oryzias_latipes_hsok
ENSFDAG00000012582	EDC3	100	68.173	ENSORLG00015005634	edc3	100	68.173	Oryzias_latipes_hsok
ENSFDAG00000012582	EDC3	100	68.824	ENSOMEG00000014026	edc3	100	68.824	Oryzias_melastigma
ENSFDAG00000012582	EDC3	100	57.227	ENSOMEG00000017354	EDC3	100	57.227	Oryzias_melastigma
ENSFDAG00000012582	EDC3	100	94.882	ENSOGAG00000014441	EDC3	100	94.882	Otolemur_garnettii
ENSFDAG00000012582	EDC3	100	93.713	ENSOARG00000003476	EDC3	100	94.106	Ovis_aries
ENSFDAG00000012582	EDC3	100	95.276	ENSPPAG00000040143	EDC3	100	95.276	Pan_paniscus
ENSFDAG00000012582	EDC3	100	95.079	ENSPPRG00000006257	EDC3	100	95.079	Panthera_pardus
ENSFDAG00000012582	EDC3	100	95.079	ENSPTIG00000017424	EDC3	100	95.079	Panthera_tigris_altaica
ENSFDAG00000012582	EDC3	100	95.276	ENSPTRG00000007279	EDC3	100	95.276	Pan_troglodytes
ENSFDAG00000012582	EDC3	100	96.260	ENSPANG00000015997	EDC3	100	96.260	Papio_anubis
ENSFDAG00000012582	EDC3	100	68.945	ENSPKIG00000004416	edc3	100	69.922	Paramormyrops_kingsleyae
ENSFDAG00000012582	EDC3	100	66.406	ENSPKIG00000019810	EDC3	100	66.406	Paramormyrops_kingsleyae
ENSFDAG00000012582	EDC3	100	82.283	ENSPSIG00000008474	EDC3	100	82.283	Pelodiscus_sinensis
ENSFDAG00000012582	EDC3	100	67.319	ENSPMGG00000007223	edc3	100	67.319	Periophthalmus_magnuspinnatus
ENSFDAG00000012582	EDC3	100	94.488	ENSPEMG00000015260	Edc3	100	94.488	Peromyscus_maniculatus_bairdii
ENSFDAG00000012582	EDC3	100	88.976	ENSPCIG00000006276	EDC3	70	89.152	Phascolarctos_cinereus
ENSFDAG00000012582	EDC3	100	69.352	ENSPFOG00000012204	edc3	100	69.352	Poecilia_formosa
ENSFDAG00000012582	EDC3	100	69.352	ENSPLAG00000014420	edc3	100	69.352	Poecilia_latipinna
ENSFDAG00000012582	EDC3	100	69.352	ENSPMEG00000023289	edc3	100	69.352	Poecilia_mexicana
ENSFDAG00000012582	EDC3	100	69.548	ENSPREG00000016022	edc3	100	69.548	Poecilia_reticulata
ENSFDAG00000012582	EDC3	100	94.094	ENSPPYG00000006642	EDC3	100	94.094	Pongo_abelii
ENSFDAG00000012582	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSFDAG00000012582	EDC3	100	95.472	ENSPCOG00000013364	EDC3	100	95.472	Propithecus_coquereli
ENSFDAG00000012582	EDC3	100	93.898	ENSPVAG00000014733	EDC3	100	93.898	Pteropus_vampyrus
ENSFDAG00000012582	EDC3	99	58.594	ENSPNYG00000009669	EDC3	99	58.594	Pundamilia_nyererei
ENSFDAG00000012582	EDC3	100	68.369	ENSPNYG00000021797	edc3	100	68.369	Pundamilia_nyererei
ENSFDAG00000012582	EDC3	100	69.557	ENSPNAG00000019657	edc3	100	69.557	Pygocentrus_nattereri
ENSFDAG00000012582	EDC3	99	94.257	ENSRNOG00000019579	Edc3	99	94.257	Rattus_norvegicus
ENSFDAG00000012582	EDC3	100	95.866	ENSRBIG00000019488	EDC3	100	95.866	Rhinopithecus_bieti
ENSFDAG00000012582	EDC3	100	95.866	ENSRROG00000034959	EDC3	100	95.866	Rhinopithecus_roxellana
ENSFDAG00000012582	EDC3	100	95.472	ENSSBOG00000004896	EDC3	100	95.472	Saimiri_boliviensis_boliviensis
ENSFDAG00000012582	EDC3	96	90.184	ENSSHAG00000015075	EDC3	95	90.184	Sarcophilus_harrisii
ENSFDAG00000012582	EDC3	100	63.529	ENSSFOG00015002439	edc3	100	65.175	Scleropages_formosus
ENSFDAG00000012582	EDC3	100	70.817	ENSSFOG00015016939	edc3	100	71.984	Scleropages_formosus
ENSFDAG00000012582	EDC3	100	69.745	ENSSMAG00000010695	edc3	100	69.745	Scophthalmus_maximus
ENSFDAG00000012582	EDC3	99	57.310	ENSSMAG00000010176	-	99	57.310	Scophthalmus_maximus
ENSFDAG00000012582	EDC3	100	69.608	ENSSDUG00000021844	edc3	100	69.608	Seriola_dumerili
ENSFDAG00000012582	EDC3	100	59.496	ENSSDUG00000007671	EDC3	100	59.496	Seriola_dumerili
ENSFDAG00000012582	EDC3	100	69.608	ENSSLDG00000022046	edc3	100	69.608	Seriola_lalandi_dorsalis
ENSFDAG00000012582	EDC3	81	95.161	ENSSARG00000003907	EDC3	80	95.161	Sorex_araneus
ENSFDAG00000012582	EDC3	100	87.598	ENSSPUG00000008232	EDC3	100	87.598	Sphenodon_punctatus
ENSFDAG00000012582	EDC3	100	57.782	ENSSPAG00000020327	EDC3	100	58.366	Stegastes_partitus
ENSFDAG00000012582	EDC3	100	69.608	ENSSPAG00000010009	edc3	100	69.608	Stegastes_partitus
ENSFDAG00000012582	EDC3	100	94.685	ENSSSCG00000001903	EDC3	100	94.685	Sus_scrofa
ENSFDAG00000012582	EDC3	100	87.205	ENSTGUG00000004007	EDC3	100	87.205	Taeniopygia_guttata
ENSFDAG00000012582	EDC3	100	70.138	ENSTRUG00000017078	edc3	100	70.138	Takifugu_rubripes
ENSFDAG00000012582	EDC3	100	68.885	ENSTNIG00000016047	edc3	100	68.885	Tetraodon_nigroviridis
ENSFDAG00000012582	EDC3	100	94.488	ENSTTRG00000007990	EDC3	100	94.488	Tursiops_truncatus
ENSFDAG00000012582	EDC3	100	94.882	ENSUAMG00000026710	-	100	94.882	Ursus_americanus
ENSFDAG00000012582	EDC3	100	94.882	ENSUMAG00000005006	EDC3	96	94.882	Ursus_maritimus
ENSFDAG00000012582	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSFDAG00000012582	EDC3	100	94.882	ENSVVUG00000018601	EDC3	100	94.882	Vulpes_vulpes
ENSFDAG00000012582	EDC3	68	81.609	ENSXETG00000010622	edc3	99	82.759	Xenopus_tropicalis
ENSFDAG00000012582	EDC3	100	69.020	ENSXMAG00000007377	edc3	100	69.020	Xiphophorus_maculatus