EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000012658 (Gene tree)
Gene ID: 104860089
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 60964 bases
Position: chrKN121930.1:7970226-8031189
Accession: 104860089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000003119	HRDC	PF00570.23	1.7e-12	1	1
ENSFDAP00000003119	BDHCT	PF08072.11	3.7e-20	1	1
ENSFDAP00000003119	DEAD	PF00270.29	5.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000016831	BLM-201	4047	XM_010621100	ENSFDAP00000003119	1348 (aa)	XP_010619402	-

Gene Model

Click here to download ENSFDAG00000012658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012658	BLM	100	72.702	ENSG00000197299	BLM	100	74.850	Homo_sapiens
ENSFDAG00000012658	BLM	55	65.888	ENSAPOG00000017966	blm	55	65.888	Acanthochromis_polyacanthus
ENSFDAG00000012658	BLM	100	70.658	ENSAMEG00000013843	BLM	100	70.588	Ailuropoda_melanoleuca
ENSFDAG00000012658	BLM	56	64.253	ENSACIG00000023762	blm	53	64.253	Amphilophus_citrinellus
ENSFDAG00000012658	BLM	51	77.711	ENSAOCG00000003318	blm	51	77.711	Amphiprion_ocellaris
ENSFDAG00000012658	BLM	51	77.711	ENSAPEG00000018105	blm	62	77.711	Amphiprion_percula
ENSFDAG00000012658	BLM	51	80.120	ENSATEG00000006421	blm	51	80.120	Anabas_testudineus
ENSFDAG00000012658	BLM	81	51.236	ENSAPLG00000006878	BLM	99	50.824	Anas_platyrhynchos
ENSFDAG00000012658	BLM	52	80.460	ENSACAG00000014275	BLM	50	80.460	Anolis_carolinensis
ENSFDAG00000012658	BLM	98	86.415	ENSANAG00000038415	BLM	93	91.139	Aotus_nancymaae
ENSFDAG00000012658	BLM	87	66.516	ENSACLG00000020354	blm	83	66.516	Astatotilapia_calliptera
ENSFDAG00000012658	BLM	86	57.362	ENSAMXG00000016970	blm	88	54.831	Astyanax_mexicanus
ENSFDAG00000012658	BLM	100	60.991	ENSBTAG00000020301	BLM	100	61.135	Bos_taurus
ENSFDAG00000012658	BLM	98	86.226	ENSCJAG00000009803	BLM	93	91.561	Callithrix_jacchus
ENSFDAG00000012658	BLM	100	70.287	ENSCAFG00000012385	BLM	100	69.657	Canis_familiaris
ENSFDAG00000012658	BLM	100	70.147	ENSCAFG00020016111	BLM	100	73.054	Canis_lupus_dingo
ENSFDAG00000012658	BLM	100	68.676	ENSCHIG00000010329	BLM	100	68.816	Capra_hircus
ENSFDAG00000012658	BLM	99	85.343	ENSTSYG00000012368	BLM	94	86.992	Carlito_syrichta
ENSFDAG00000012658	BLM	87	80.247	ENSCAPG00000017976	BLM	100	80.247	Cavia_aperea
ENSFDAG00000012658	BLM	100	80.070	ENSCPOG00000001761	BLM	100	77.676	Cavia_porcellus
ENSFDAG00000012658	BLM	98	85.660	ENSCCAG00000023069	BLM	93	92.405	Cebus_capucinus
ENSFDAG00000012658	BLM	98	87.170	ENSCATG00000040609	BLM	93	92.827	Cercocebus_atys
ENSFDAG00000012658	BLM	100	81.690	ENSCLAG00000012111	BLM	100	81.761	Chinchilla_lanigera
ENSFDAG00000012658	BLM	98	86.226	ENSCSAG00000017040	BLM	94	86.604	Chlorocebus_sabaeus
ENSFDAG00000012658	BLM	92	76.842	ENSCHOG00000006255	BLM	90	76.842	Choloepus_hoffmanni
ENSFDAG00000012658	BLM	88	47.001	ENSCPBG00000025000	BLM	96	58.194	Chrysemys_picta_bellii
ENSFDAG00000012658	BLM	83	92.778	ENSCANG00000034808	BLM	100	92.778	Colobus_angolensis_palliatus
ENSFDAG00000012658	BLM	100	72.861	ENSCGRG00001024897	Blm	100	70.988	Cricetulus_griseus_chok1gshd
ENSFDAG00000012658	BLM	66	63.005	ENSCGRG00000016261	Blm	97	63.043	Cricetulus_griseus_crigri
ENSFDAG00000012658	BLM	53	52.020	ENSCSEG00000013483	blm	60	52.465	Cynoglossus_semilaevis
ENSFDAG00000012658	BLM	83	79.518	ENSDARG00000077089	blm	78	79.518	Danio_rerio
ENSFDAG00000012658	BLM	99	72.036	ENSDNOG00000010159	BLM	99	71.478	Dasypus_novemcinctus
ENSFDAG00000012658	BLM	72	68.099	ENSDORG00000011033	Blm	100	69.532	Dipodomys_ordii
ENSFDAG00000012658	BLM	54	34.102	FBgn0002906	Blm	52	34.453	Drosophila_melanogaster
ENSFDAG00000012658	BLM	84	64.354	ENSETEG00000015019	BLM	80	64.354	Echinops_telfairi
ENSFDAG00000012658	BLM	100	68.410	ENSEASG00005006727	BLM	100	71.856	Equus_asinus_asinus
ENSFDAG00000012658	BLM	100	70.701	ENSECAG00000011405	BLM	100	70.701	Equus_caballus
ENSFDAG00000012658	BLM	96	82.714	ENSEEUG00000001434	BLM	92	82.714	Erinaceus_europaeus
ENSFDAG00000012658	BLM	99	59.672	ENSELUG00000019098	blm	92	61.980	Esox_lucius
ENSFDAG00000012658	BLM	100	69.678	ENSFCAG00000006087	BLM	100	78.443	Felis_catus
ENSFDAG00000012658	BLM	74	52.110	ENSFALG00000010981	BLM	99	47.254	Ficedula_albicollis
ENSFDAG00000012658	BLM	55	66.355	ENSFHEG00000002553	blm	94	59.074	Fundulus_heteroclitus
ENSFDAG00000012658	BLM	100	38.089	ENSGMOG00000016431	blm	80	76.506	Gadus_morhua
ENSFDAG00000012658	BLM	82	50.407	ENSGALG00000008256	BLM	99	46.295	Gallus_gallus
ENSFDAG00000012658	BLM	55	66.355	ENSGAFG00000001117	blm	56	66.355	Gambusia_affinis
ENSFDAG00000012658	BLM	61	77.108	ENSGACG00000010863	blm	85	79.470	Gasterosteus_aculeatus
ENSFDAG00000012658	BLM	88	43.997	ENSGAGG00000005383	BLM	91	59.612	Gopherus_agassizii
ENSFDAG00000012658	BLM	100	72.593	ENSGGOG00000007710	BLM	100	74.850	Gorilla_gorilla
ENSFDAG00000012658	BLM	87	66.516	ENSHBUG00000015943	blm	83	66.516	Haplochromis_burtoni
ENSFDAG00000012658	BLM	99	93.271	ENSHGLG00000013231	BLM	95	93.271	Heterocephalus_glaber_female
ENSFDAG00000012658	BLM	72	49.190	ENSHCOG00000011455	blm	83	54.470	Hippocampus_comes
ENSFDAG00000012658	BLM	71	59.013	ENSIPUG00000000529	blm	60	75.740	Ictalurus_punctatus
ENSFDAG00000012658	BLM	100	71.888	ENSSTOG00000005000	BLM	100	72.657	Ictidomys_tridecemlineatus
ENSFDAG00000012658	BLM	64	81.333	ENSJJAG00000016322	Blm	94	81.333	Jaculus_jaculus
ENSFDAG00000012658	BLM	78	58.178	ENSKMAG00000016608	blm	54	65.639	Kryptolebias_marmoratus
ENSFDAG00000012658	BLM	56	68.966	ENSLACG00000006490	BLM	94	64.037	Latimeria_chalumnae
ENSFDAG00000012658	BLM	84	47.513	ENSLOCG00000014302	blm	89	56.066	Lepisosteus_oculatus
ENSFDAG00000012658	BLM	98	87.170	ENSMFAG00000042982	BLM	93	93.249	Macaca_fascicularis
ENSFDAG00000012658	BLM	98	87.358	ENSMMUG00000019526	BLM	93	93.249	Macaca_mulatta
ENSFDAG00000012658	BLM	98	73.329	ENSMNEG00000031251	BLM	98	73.381	Macaca_nemestrina
ENSFDAG00000012658	BLM	98	86.604	ENSMLEG00000032934	BLM	94	86.604	Mandrillus_leucophaeus
ENSFDAG00000012658	BLM	65	67.421	ENSMAMG00000008726	blm	82	67.421	Mastacembelus_armatus
ENSFDAG00000012658	BLM	87	66.516	ENSMZEG00005022323	blm	66	66.516	Maylandia_zebra
ENSFDAG00000012658	BLM	100	70.231	ENSMAUG00000008953	Blm	99	70.469	Mesocricetus_auratus
ENSFDAG00000012658	BLM	100	73.090	ENSMICG00000034442	BLM	100	73.020	Microcebus_murinus
ENSFDAG00000012658	BLM	100	69.339	ENSMOCG00000016367	Blm	99	69.831	Microtus_ochrogaster
ENSFDAG00000012658	BLM	56	61.233	ENSMMOG00000006959	blm	55	61.233	Mola_mola
ENSFDAG00000012658	BLM	99	58.152	ENSMODG00000019449	BLM	99	58.135	Monodelphis_domestica
ENSFDAG00000012658	BLM	64	67.757	ENSMALG00000007323	blm	82	65.044	Monopterus_albus
ENSFDAG00000012658	BLM	100	70.119	MGP_CAROLIEiJ_G0029907	Blm	100	70.189	Mus_caroli
ENSFDAG00000012658	BLM	100	70.265	ENSMUSG00000030528	Blm	100	68.318	Mus_musculus
ENSFDAG00000012658	BLM	100	70.728	MGP_PahariEiJ_G0013129	Blm	100	68.697	Mus_pahari
ENSFDAG00000012658	BLM	100	70.749	MGP_SPRETEiJ_G0031009	Blm	100	68.719	Mus_spretus
ENSFDAG00000012658	BLM	84	67.463	ENSMPUG00000015657	BLM	99	67.381	Mustela_putorius_furo
ENSFDAG00000012658	BLM	100	68.061	ENSMLUG00000014697	BLM	100	68.131	Myotis_lucifugus
ENSFDAG00000012658	BLM	100	73.455	ENSNGAG00000001275	Blm	100	70.836	Nannospalax_galili
ENSFDAG00000012658	BLM	87	65.909	ENSNBRG00000019702	blm	70	65.909	Neolamprologus_brichardi
ENSFDAG00000012658	BLM	100	70.848	ENSNLEG00000012087	BLM	100	74.092	Nomascus_leucogenys
ENSFDAG00000012658	BLM	99	74.674	ENSMEUG00000007253	BLM	94	74.674	Notamacropus_eugenii
ENSFDAG00000012658	BLM	94	72.299	ENSOPRG00000011667	BLM	94	72.299	Ochotona_princeps
ENSFDAG00000012658	BLM	72	75.216	ENSODEG00000015373	BLM	100	75.312	Octodon_degus
ENSFDAG00000012658	BLM	57	65.502	ENSONIG00000015193	blm	54	65.502	Oreochromis_niloticus
ENSFDAG00000012658	BLM	52	71.615	ENSOANG00000009316	-	99	71.615	Ornithorhynchus_anatinus
ENSFDAG00000012658	BLM	99	66.433	ENSOCUG00000013969	BLM	99	66.013	Oryctolagus_cuniculus
ENSFDAG00000012658	BLM	77	59.853	ENSORLG00000008110	blm	54	65.753	Oryzias_latipes
ENSFDAG00000012658	BLM	99	59.630	ENSORLG00020004812	blm	54	65.753	Oryzias_latipes_hni
ENSFDAG00000012658	BLM	77	59.630	ENSORLG00015018640	blm	94	60.183	Oryzias_latipes_hsok
ENSFDAG00000012658	BLM	55	66.822	ENSOMEG00000023545	blm	53	66.822	Oryzias_melastigma
ENSFDAG00000012658	BLM	100	69.986	ENSOGAG00000005708	BLM	100	69.495	Otolemur_garnettii
ENSFDAG00000012658	BLM	100	71.627	ENSOARG00000012875	BLM	100	68.194	Ovis_aries
ENSFDAG00000012658	BLM	100	72.051	ENSPPAG00000032173	BLM	100	74.251	Pan_paniscus
ENSFDAG00000012658	BLM	100	69.818	ENSPPRG00000002471	BLM	100	78.443	Panthera_pardus
ENSFDAG00000012658	BLM	100	70.938	ENSPTIG00000016168	BLM	100	77.358	Panthera_tigris_altaica
ENSFDAG00000012658	BLM	100	71.388	ENSPTRG00000007460	BLM	100	73.054	Pan_troglodytes
ENSFDAG00000012658	BLM	98	86.981	ENSPANG00000018572	BLM	93	92.405	Papio_anubis
ENSFDAG00000012658	BLM	87	65.625	ENSPKIG00000008954	blm	81	65.625	Paramormyrops_kingsleyae
ENSFDAG00000012658	BLM	100	71.278	ENSPEMG00000017348	Blm	100	71.419	Peromyscus_maniculatus_bairdii
ENSFDAG00000012658	BLM	99	55.427	ENSPCIG00000006609	BLM	99	55.427	Phascolarctos_cinereus
ENSFDAG00000012658	BLM	55	67.593	ENSPFOG00000005059	blm	53	67.593	Poecilia_formosa
ENSFDAG00000012658	BLM	55	66.822	ENSPLAG00000017344	blm	53	66.822	Poecilia_latipinna
ENSFDAG00000012658	BLM	55	66.822	ENSPMEG00000000321	blm	53	66.822	Poecilia_mexicana
ENSFDAG00000012658	BLM	99	86.271	ENSPPYG00000006784	BLM	100	71.919	Pongo_abelii
ENSFDAG00000012658	BLM	73	87.097	ENSPCAG00000008960	BLM	74	87.097	Procavia_capensis
ENSFDAG00000012658	BLM	100	67.577	ENSPCOG00000000439	BLM	100	74.251	Propithecus_coquereli
ENSFDAG00000012658	BLM	79	81.463	ENSPVAG00000011642	BLM	83	87.500	Pteropus_vampyrus
ENSFDAG00000012658	BLM	88	52.471	ENSPNYG00000010956	blm	87	53.181	Pundamilia_nyererei
ENSFDAG00000012658	BLM	57	53.653	ENSPNAG00000011714	blm	87	55.934	Pygocentrus_nattereri
ENSFDAG00000012658	BLM	100	69.944	ENSRNOG00000011213	Blm	100	69.803	Rattus_norvegicus
ENSFDAG00000012658	BLM	98	86.981	ENSRBIG00000029656	BLM	93	91.983	Rhinopithecus_bieti
ENSFDAG00000012658	BLM	98	86.981	ENSRROG00000037871	BLM	93	91.983	Rhinopithecus_roxellana
ENSFDAG00000012658	BLM	89	91.983	ENSSBOG00000030957	BLM	93	91.983	Saimiri_boliviensis_boliviensis
ENSFDAG00000012658	BLM	99	54.754	ENSSHAG00000007988	BLM	99	54.754	Sarcophilus_harrisii
ENSFDAG00000012658	BLM	60	62.500	ENSSFOG00015015462	blm	65	62.500	Scleropages_formosus
ENSFDAG00000012658	BLM	55	65.888	ENSSMAG00000001120	blm	54	65.888	Scophthalmus_maximus
ENSFDAG00000012658	BLM	55	68.224	ENSSDUG00000010955	blm	53	68.224	Seriola_dumerili
ENSFDAG00000012658	BLM	56	66.516	ENSSLDG00000000634	blm	54	66.516	Seriola_lalandi_dorsalis
ENSFDAG00000012658	BLM	90	62.455	ENSSARG00000006398	BLM	90	73.655	Sorex_araneus
ENSFDAG00000012658	BLM	78	54.821	ENSSPUG00000000013	BLM	96	54.432	Sphenodon_punctatus
ENSFDAG00000012658	BLM	56	62.832	ENSSPAG00000013999	blm	53	62.832	Stegastes_partitus
ENSFDAG00000012658	BLM	100	71.161	ENSSSCG00000001816	BLM	99	71.161	Sus_scrofa
ENSFDAG00000012658	BLM	78	41.952	ENSTGUG00000009959	-	99	46.318	Taeniopygia_guttata
ENSFDAG00000012658	BLM	77	57.993	ENSTRUG00000019860	blm	71	57.993	Takifugu_rubripes
ENSFDAG00000012658	BLM	89	58.442	ENSTNIG00000019246	blm	81	58.442	Tetraodon_nigroviridis
ENSFDAG00000012658	BLM	82	81.096	ENSTBEG00000006706	BLM	80	81.096	Tupaia_belangeri
ENSFDAG00000012658	BLM	100	69.937	ENSTTRG00000016386	BLM	100	69.867	Tursiops_truncatus
ENSFDAG00000012658	BLM	100	70.757	ENSUMAG00000009105	BLM	100	73.653	Ursus_maritimus
ENSFDAG00000012658	BLM	99	67.930	ENSVPAG00000000085	BLM	99	67.672	Vicugna_pacos
ENSFDAG00000012658	BLM	100	69.444	ENSVVUG00000006402	BLM	99	72.603	Vulpes_vulpes
ENSFDAG00000012658	BLM	98	64.728	ENSXETG00000007847	blm	77	90.909	Xenopus_tropicalis
ENSFDAG00000012658	BLM	56	53.431	ENSXCOG00000020227	blm	99	40.259	Xiphophorus_couchianus
ENSFDAG00000012658	BLM	55	65.421	ENSXMAG00000002951	blm	94	58.845	Xiphophorus_maculatus