EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000012697 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 1058 bases
Position: chrKN121161.1:3658161-3659218
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000003181	FRG1	PF06229.12	5.3e-59	1	1
ENSFDAP00000003185	FRG1	PF06229.12	9.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000016887	-	912	-	ENSFDAP00000003185	218 (aa)	-	-
ENSFDAT00000016888	-	735	-	ENSFDAP00000003181	244 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000012697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000012697	-	98	93.458	ENSFDAG00000000962	-	100	87.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012697	-	100	84.615	ENSG00000109536	FRG1	100	95.690	Homo_sapiens
ENSFDAG00000012697	-	98	66.822	ENSAPOG00000001060	frg1	100	62.452	Acanthochromis_polyacanthus
ENSFDAG00000012697	-	98	87.907	ENSAMEG00000013503	FRG1	100	85.769	Ailuropoda_melanoleuca
ENSFDAG00000012697	-	82	70.391	ENSACIG00000022283	frg1	98	63.927	Amphilophus_citrinellus
ENSFDAG00000012697	-	82	69.274	ENSAOCG00000024240	frg1	85	63.927	Amphiprion_ocellaris
ENSFDAG00000012697	-	98	67.290	ENSAPEG00000002486	frg1	100	62.452	Amphiprion_percula
ENSFDAG00000012697	-	98	68.224	ENSATEG00000010414	frg1	100	60.920	Anabas_testudineus
ENSFDAG00000012697	-	98	84.112	ENSAPLG00000007785	-	100	76.923	Anas_platyrhynchos
ENSFDAG00000012697	-	98	77.570	ENSACAG00000006877	-	100	71.538	Anolis_carolinensis
ENSFDAG00000012697	-	98	89.720	ENSANAG00000020876	FRG1	100	84.615	Aotus_nancymaae
ENSFDAG00000012697	-	98	61.682	ENSACLG00000027065	frg1	100	55.513	Astatotilapia_calliptera
ENSFDAG00000012697	-	98	71.495	ENSAMXG00000032700	frg1	100	64.231	Astyanax_mexicanus
ENSFDAG00000012697	-	98	87.907	ENSBTAG00000007089	FRG1	100	85.769	Bos_taurus
ENSFDAG00000012697	-	81	39.474	WBGene00014177	frg-1	82	39.474	Caenorhabditis_elegans
ENSFDAG00000012697	-	98	89.720	ENSCJAG00000011272	FRG1	100	84.615	Callithrix_jacchus
ENSFDAG00000012697	-	98	87.907	ENSCAFG00000007135	FRG1	100	85.769	Canis_familiaris
ENSFDAG00000012697	-	78	91.716	ENSCAFG00020000082	-	85	86.854	Canis_lupus_dingo
ENSFDAG00000012697	-	98	87.907	ENSCHIG00000011585	-	100	85.769	Capra_hircus
ENSFDAG00000012697	-	98	68.750	ENSTSYG00000031599	-	100	68.750	Carlito_syrichta
ENSFDAG00000012697	-	84	91.848	ENSCAPG00000016056	-	90	88.182	Cavia_aperea
ENSFDAG00000012697	-	98	92.056	ENSCPOG00000022277	-	100	86.538	Cavia_porcellus
ENSFDAG00000012697	-	98	89.720	ENSCCAG00000024627	FRG1	100	84.615	Cebus_capucinus
ENSFDAG00000012697	-	100	84.615	ENSCATG00000029230	FRG1	100	84.615	Cercocebus_atys
ENSFDAG00000012697	-	100	76.378	ENSCLAG00000004960	-	100	76.772	Chinchilla_lanigera
ENSFDAG00000012697	-	98	92.056	ENSCLAG00000000370	-	100	86.538	Chinchilla_lanigera
ENSFDAG00000012697	-	98	60.748	ENSCLAG00000006068	-	100	58.566	Chinchilla_lanigera
ENSFDAG00000012697	-	87	69.312	ENSCLAG00000009263	-	100	67.220	Chinchilla_lanigera
ENSFDAG00000012697	-	100	84.615	ENSCSAG00000002899	FRG1	100	84.615	Chlorocebus_sabaeus
ENSFDAG00000012697	-	79	86.047	ENSCSAG00000017729	-	100	80.093	Chlorocebus_sabaeus
ENSFDAG00000012697	-	56	93.388	ENSCHOG00000000773	-	75	93.388	Choloepus_hoffmanni
ENSFDAG00000012697	-	83	81.768	ENSCPBG00000009211	-	85	77.169	Chrysemys_picta_bellii
ENSFDAG00000012697	-	86	47.162	ENSCING00000005161	-	99	45.725	Ciona_intestinalis
ENSFDAG00000012697	-	61	50.000	ENSCSAVG00000008018	-	100	46.486	Ciona_savignyi
ENSFDAG00000012697	-	100	84.615	ENSCANG00000020991	FRG1	100	84.615	Colobus_angolensis_palliatus
ENSFDAG00000012697	-	100	83.846	ENSCGRG00001014998	Frg1	100	83.846	Cricetulus_griseus_chok1gshd
ENSFDAG00000012697	-	98	68.224	ENSCGRG00000003902	-	96	65.769	Cricetulus_griseus_crigri
ENSFDAG00000012697	-	100	83.846	ENSCGRG00000011860	-	100	83.846	Cricetulus_griseus_crigri
ENSFDAG00000012697	-	98	64.953	ENSCSEG00000015950	frg1	100	56.627	Cynoglossus_semilaevis
ENSFDAG00000012697	-	98	65.888	ENSCVAG00000009985	frg1	100	60.769	Cyprinodon_variegatus
ENSFDAG00000012697	-	98	71.028	ENSDARG00000056504	frg1	97	73.571	Danio_rerio
ENSFDAG00000012697	-	100	85.000	ENSDNOG00000014886	FRG1	100	85.000	Dasypus_novemcinctus
ENSFDAG00000012697	-	100	81.967	ENSDORG00000016190	Frg1	100	81.967	Dipodomys_ordii
ENSFDAG00000012697	-	81	45.581	FBgn0036964	FRG1	100	41.887	Drosophila_melanogaster
ENSFDAG00000012697	-	100	83.462	ENSETEG00000012349	-	100	83.462	Echinops_telfairi
ENSFDAG00000012697	-	61	56.296	ENSEBUG00000014053	frg1	77	55.882	Eptatretus_burgeri
ENSFDAG00000012697	-	56	42.484	ENSEBUG00000012359	FRG1	91	42.484	Eptatretus_burgeri
ENSFDAG00000012697	-	98	89.252	ENSEASG00005017497	FRG1	100	84.231	Equus_asinus_asinus
ENSFDAG00000012697	-	98	89.252	ENSECAG00000003122	FRG1	100	84.231	Equus_caballus
ENSFDAG00000012697	-	57	92.800	ENSEEUG00000000145	-	100	84.076	Erinaceus_europaeus
ENSFDAG00000012697	-	98	69.626	ENSELUG00000021712	frg1	100	64.231	Esox_lucius
ENSFDAG00000012697	-	98	87.907	ENSFCAG00000025737	FRG1	100	85.769	Felis_catus
ENSFDAG00000012697	-	82	83.240	ENSFALG00000011231	-	85	77.169	Ficedula_albicollis
ENSFDAG00000012697	-	98	64.953	ENSFHEG00000010540	frg1	100	59.770	Fundulus_heteroclitus
ENSFDAG00000012697	-	98	65.421	ENSGMOG00000000867	frg1	100	60.385	Gadus_morhua
ENSFDAG00000012697	-	98	82.243	ENSGALG00000013590	-	100	74.615	Gallus_gallus
ENSFDAG00000012697	-	96	64.762	ENSGAFG00000013855	frg1	100	64.286	Gambusia_affinis
ENSFDAG00000012697	-	98	66.822	ENSGACG00000016888	frg1	100	61.154	Gasterosteus_aculeatus
ENSFDAG00000012697	-	98	80.374	ENSGAGG00000025012	-	100	74.615	Gopherus_agassizii
ENSFDAG00000012697	-	100	55.263	ENSGGOG00000040796	-	100	55.263	Gorilla_gorilla
ENSFDAG00000012697	-	93	72.414	ENSGGOG00000012888	-	88	80.460	Gorilla_gorilla
ENSFDAG00000012697	-	98	66.355	ENSHBUG00000010667	frg1	100	60.385	Haplochromis_burtoni
ENSFDAG00000012697	-	98	85.981	ENSHGLG00000020943	-	99	81.467	Heterocephalus_glaber_female
ENSFDAG00000012697	-	98	79.439	ENSHGLG00000001211	-	100	74.502	Heterocephalus_glaber_female
ENSFDAG00000012697	-	98	89.720	ENSHGLG00000020402	-	94	83.784	Heterocephalus_glaber_female
ENSFDAG00000012697	-	98	92.523	ENSHGLG00000005601	FRG1	100	86.923	Heterocephalus_glaber_female
ENSFDAG00000012697	-	98	70.093	ENSHGLG00100015285	-	100	67.692	Heterocephalus_glaber_male
ENSFDAG00000012697	-	98	79.907	ENSHGLG00100010674	-	100	74.900	Heterocephalus_glaber_male
ENSFDAG00000012697	-	98	92.056	ENSHGLG00100016261	-	100	86.538	Heterocephalus_glaber_male
ENSFDAG00000012697	-	98	85.981	ENSHGLG00100021211	-	99	81.467	Heterocephalus_glaber_male
ENSFDAG00000012697	-	82	68.156	ENSHCOG00000000224	frg1	94	61.818	Hippocampus_comes
ENSFDAG00000012697	-	98	69.626	ENSIPUG00000022716	frg1	100	63.462	Ictalurus_punctatus
ENSFDAG00000012697	-	100	84.231	ENSSTOG00000002857	-	100	84.231	Ictidomys_tridecemlineatus
ENSFDAG00000012697	-	100	85.000	ENSJJAG00000020625	Frg1	100	85.000	Jaculus_jaculus
ENSFDAG00000012697	-	98	64.953	ENSKMAG00000005841	frg1	100	59.615	Kryptolebias_marmoratus
ENSFDAG00000012697	-	98	65.888	ENSLBEG00000001466	frg1	100	61.905	Labrus_bergylta
ENSFDAG00000012697	-	98	71.296	ENSLACG00000010243	frg1	100	60.606	Latimeria_chalumnae
ENSFDAG00000012697	-	98	69.159	ENSLOCG00000013868	frg1	100	64.615	Lepisosteus_oculatus
ENSFDAG00000012697	-	100	83.846	ENSLAFG00000011191	FRG1	100	84.231	Loxodonta_africana
ENSFDAG00000012697	-	81	76.744	ENSMFAG00000042873	-	89	76.744	Macaca_fascicularis
ENSFDAG00000012697	-	100	84.615	ENSMFAG00000031178	FRG1	100	84.615	Macaca_fascicularis
ENSFDAG00000012697	-	100	84.615	ENSMMUG00000001824	FRG1	100	84.615	Macaca_mulatta
ENSFDAG00000012697	-	78	78.947	ENSMMUG00000047496	-	88	75.980	Macaca_mulatta
ENSFDAG00000012697	-	98	77.570	ENSMNEG00000018620	FRG1	100	77.510	Macaca_nemestrina
ENSFDAG00000012697	-	100	84.615	ENSMLEG00000028881	FRG1	100	84.615	Mandrillus_leucophaeus
ENSFDAG00000012697	-	98	66.355	ENSMAMG00000012406	frg1	100	61.538	Mastacembelus_armatus
ENSFDAG00000012697	-	98	65.888	ENSMZEG00005007549	frg1	100	60.000	Maylandia_zebra
ENSFDAG00000012697	-	98	83.178	ENSMGAG00000011481	-	100	75.385	Meleagris_gallopavo
ENSFDAG00000012697	-	100	84.231	ENSMAUG00000000847	Frg1	100	84.231	Mesocricetus_auratus
ENSFDAG00000012697	-	100	85.385	ENSMICG00000046816	FRG1	100	85.385	Microcebus_murinus
ENSFDAG00000012697	-	100	76.538	ENSMOCG00000023000	Frg1	100	76.538	Microtus_ochrogaster
ENSFDAG00000012697	-	82	65.922	ENSMMOG00000004008	frg1	93	61.644	Mola_mola
ENSFDAG00000012697	-	100	80.000	ENSMODG00000019031	-	87	80.000	Monodelphis_domestica
ENSFDAG00000012697	-	98	66.355	ENSMALG00000018497	frg1	100	61.923	Monopterus_albus
ENSFDAG00000012697	-	100	83.846	MGP_CAROLIEiJ_G0031006	Frg1	100	83.846	Mus_caroli
ENSFDAG00000012697	-	100	83.846	ENSMUSG00000031590	Frg1	100	83.846	Mus_musculus
ENSFDAG00000012697	-	100	83.462	MGP_PahariEiJ_G0021475	Frg1	100	83.462	Mus_pahari
ENSFDAG00000012697	-	100	83.462	MGP_SPRETEiJ_G0032120	Frg1	100	83.462	Mus_spretus
ENSFDAG00000012697	-	98	87.907	ENSMPUG00000017962	FRG1	100	85.769	Mustela_putorius_furo
ENSFDAG00000012697	-	98	89.720	ENSMLUG00000023179	FRG1	100	84.231	Myotis_lucifugus
ENSFDAG00000012697	-	100	84.615	ENSNGAG00000016411	Frg1	100	84.615	Nannospalax_galili
ENSFDAG00000012697	-	96	61.905	ENSNBRG00000006806	frg1	95	61.905	Neolamprologus_brichardi
ENSFDAG00000012697	-	98	76.168	ENSNLEG00000035849	-	100	70.076	Nomascus_leucogenys
ENSFDAG00000012697	-	98	88.785	ENSNLEG00000000930	FRG1	100	83.846	Nomascus_leucogenys
ENSFDAG00000012697	-	98	72.685	ENSNLEG00000032333	-	100	67.939	Nomascus_leucogenys
ENSFDAG00000012697	-	78	79.290	ENSNLEG00000036059	-	86	74.752	Nomascus_leucogenys
ENSFDAG00000012697	-	100	58.462	ENSNLEG00000032846	-	100	72.321	Nomascus_leucogenys
ENSFDAG00000012697	-	78	79.290	ENSNLEG00000028874	-	91	73.762	Nomascus_leucogenys
ENSFDAG00000012697	-	50	87.037	ENSMEUG00000007509	-	59	78.947	Notamacropus_eugenii
ENSFDAG00000012697	-	96	88.626	ENSOPRG00000004722	-	100	74.231	Ochotona_princeps
ENSFDAG00000012697	-	98	92.056	ENSODEG00000006458	-	100	86.538	Octodon_degus
ENSFDAG00000012697	-	100	68.235	ENSODEG00000006953	-	100	68.235	Octodon_degus
ENSFDAG00000012697	-	98	66.355	ENSONIG00000010162	frg1	100	60.536	Oreochromis_niloticus
ENSFDAG00000012697	-	58	86.614	ENSOANG00000005659	-	76	78.947	Ornithorhynchus_anatinus
ENSFDAG00000012697	-	100	85.769	ENSOCUG00000009038	-	100	85.769	Oryctolagus_cuniculus
ENSFDAG00000012697	-	98	65.421	ENSORLG00000008106	frg1	89	58.635	Oryzias_latipes
ENSFDAG00000012697	-	98	65.888	ENSORLG00020014355	frg1	100	59.615	Oryzias_latipes_hni
ENSFDAG00000012697	-	98	65.888	ENSORLG00015014159	frg1	100	59.615	Oryzias_latipes_hsok
ENSFDAG00000012697	-	98	66.667	ENSOMEG00000002468	frg1	87	66.667	Oryzias_melastigma
ENSFDAG00000012697	-	98	88.372	ENSOGAG00000005749	-	100	83.846	Otolemur_garnettii
ENSFDAG00000012697	-	98	87.907	ENSOARG00000008592	FRG1	100	83.270	Ovis_aries
ENSFDAG00000012697	-	98	84.038	ENSPPAG00000043170	-	99	84.038	Pan_paniscus
ENSFDAG00000012697	-	98	64.055	ENSPPAG00000043174	-	100	59.073	Pan_paniscus
ENSFDAG00000012697	-	98	87.850	ENSPPRG00000019777	-	100	82.692	Panthera_pardus
ENSFDAG00000012697	-	100	85.769	ENSPPRG00000025003	-	100	85.769	Panthera_pardus
ENSFDAG00000012697	-	100	85.000	ENSPTIG00000006588	-	100	85.000	Panthera_tigris_altaica
ENSFDAG00000012697	-	98	88.318	ENSPTIG00000006566	-	100	83.077	Panthera_tigris_altaica
ENSFDAG00000012697	-	98	73.272	ENSPTRG00000043123	-	94	68.511	Pan_troglodytes
ENSFDAG00000012697	-	97	70.142	ENSPTRG00000052363	-	94	77.228	Pan_troglodytes
ENSFDAG00000012697	-	98	71.296	ENSPTRG00000044710	-	100	64.940	Pan_troglodytes
ENSFDAG00000012697	-	100	84.615	ENSPTRG00000050205	-	100	84.615	Pan_troglodytes
ENSFDAG00000012697	-	98	70.370	ENSPTRG00000050204	-	100	62.948	Pan_troglodytes
ENSFDAG00000012697	-	100	84.615	ENSPTRG00000016671	-	100	84.615	Pan_troglodytes
ENSFDAG00000012697	-	83	77.778	ENSPANG00000031530	-	84	81.868	Papio_anubis
ENSFDAG00000012697	-	98	67.290	ENSPKIG00000024189	frg1	100	61.538	Paramormyrops_kingsleyae
ENSFDAG00000012697	-	79	81.977	ENSPSIG00000017971	-	82	75.926	Pelodiscus_sinensis
ENSFDAG00000012697	-	98	61.215	ENSPMGG00000019273	frg1	100	56.863	Periophthalmus_magnuspinnatus
ENSFDAG00000012697	-	100	83.846	ENSPEMG00000000650	Frg1	100	83.846	Peromyscus_maniculatus_bairdii
ENSFDAG00000012697	-	98	83.721	ENSPCIG00000007530	-	69	77.308	Phascolarctos_cinereus
ENSFDAG00000012697	-	98	66.355	ENSPFOG00000006721	frg1	100	59.770	Poecilia_formosa
ENSFDAG00000012697	-	50	72.477	ENSPLAG00000005321	frg1	69	72.477	Poecilia_latipinna
ENSFDAG00000012697	-	98	66.822	ENSPMEG00000013816	frg1	100	60.000	Poecilia_mexicana
ENSFDAG00000012697	-	98	66.355	ENSPREG00000000097	frg1	100	59.615	Poecilia_reticulata
ENSFDAG00000012697	-	67	91.034	ENSPPYG00000029810	-	100	91.034	Pongo_abelii
ENSFDAG00000012697	-	57	87.200	ENSPPYG00000011275	-	87	79.114	Pongo_abelii
ENSFDAG00000012697	-	98	81.308	ENSPCAG00000014953	-	100	80.242	Procavia_capensis
ENSFDAG00000012697	-	100	65.164	ENSPCOG00000022726	FRG1	100	65.164	Propithecus_coquereli
ENSFDAG00000012697	-	100	71.154	ENSPVAG00000010551	FRG1	100	71.154	Pteropus_vampyrus
ENSFDAG00000012697	-	58	71.654	ENSPNYG00000015209	frg1	74	61.988	Pundamilia_nyererei
ENSFDAG00000012697	-	98	66.355	ENSPNAG00000013259	frg1	100	62.692	Pygocentrus_nattereri
ENSFDAG00000012697	-	100	82.692	ENSRNOG00000009846	Frg1	100	82.692	Rattus_norvegicus
ENSFDAG00000012697	-	98	83.645	ENSRBIG00000042219	-	94	81.498	Rhinopithecus_bieti
ENSFDAG00000012697	-	77	83.832	ENSRROG00000032084	-	88	80.095	Rhinopithecus_roxellana
ENSFDAG00000012697	-	100	81.538	ENSRROG00000015523	FRG1	100	81.538	Rhinopithecus_roxellana
ENSFDAG00000012697	-	98	89.720	ENSSBOG00000034175	FRG1	100	83.846	Saimiri_boliviensis_boliviensis
ENSFDAG00000012697	-	98	82.326	ENSSHAG00000005886	-	100	79.231	Sarcophilus_harrisii
ENSFDAG00000012697	-	98	68.224	ENSSFOG00015021361	frg1	99	60.317	Scleropages_formosus
ENSFDAG00000012697	-	98	62.617	ENSSMAG00000001213	frg1	100	59.615	Scophthalmus_maximus
ENSFDAG00000012697	-	98	66.822	ENSSDUG00000018886	frg1	100	60.385	Seriola_dumerili
ENSFDAG00000012697	-	98	64.486	ENSSLDG00000024191	frg1	100	59.615	Seriola_lalandi_dorsalis
ENSFDAG00000012697	-	78	88.889	ENSSARG00000002471	-	94	88.701	Sorex_araneus
ENSFDAG00000012697	-	96	78.571	ENSSPUG00000017326	-	96	78.571	Sphenodon_punctatus
ENSFDAG00000012697	-	98	64.019	ENSSPAG00000013294	frg1	100	57.308	Stegastes_partitus
ENSFDAG00000012697	-	100	85.000	ENSSSCG00000006996	FRG1	100	85.000	Sus_scrofa
ENSFDAG00000012697	-	56	85.366	ENSTGUG00000016714	-	100	85.366	Taeniopygia_guttata
ENSFDAG00000012697	-	98	82.243	ENSTGUG00000007028	-	100	74.615	Taeniopygia_guttata
ENSFDAG00000012697	-	98	67.290	ENSTRUG00000016208	frg1	100	60.769	Takifugu_rubripes
ENSFDAG00000012697	-	98	63.551	ENSTNIG00000007128	frg1	100	60.769	Tetraodon_nigroviridis
ENSFDAG00000012697	-	75	58.421	ENSTBEG00000017605	-	99	58.639	Tupaia_belangeri
ENSFDAG00000012697	-	100	83.462	ENSTBEG00000014491	-	100	83.462	Tupaia_belangeri
ENSFDAG00000012697	-	81	58.571	ENSTBEG00000012789	-	100	58.571	Tupaia_belangeri
ENSFDAG00000012697	-	100	85.000	ENSTTRG00000003429	FRG1	100	85.000	Tursiops_truncatus
ENSFDAG00000012697	-	98	81.308	ENSUAMG00000012123	-	100	77.510	Ursus_americanus
ENSFDAG00000012697	-	98	87.907	ENSUMAG00000021119	FRG1	100	85.769	Ursus_maritimus
ENSFDAG00000012697	-	83	90.608	ENSVPAG00000011977	-	93	86.818	Vicugna_pacos
ENSFDAG00000012697	-	100	86.275	ENSVPAG00000000616	FRG1	100	86.275	Vicugna_pacos
ENSFDAG00000012697	-	78	91.716	ENSVVUG00000007181	-	77	86.854	Vulpes_vulpes
ENSFDAG00000012697	-	98	77.103	ENSXETG00000012470	frg1	100	70.769	Xenopus_tropicalis
ENSFDAG00000012697	-	98	60.748	ENSXCOG00000005312	frg1	100	56.538	Xiphophorus_couchianus
ENSFDAG00000012697	-	98	65.888	ENSXMAG00000007751	frg1	100	59.231	Xiphophorus_maculatus