EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000012881 (Gene tree)
Gene ID: 104864713
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 38003 bases
Position: chrKN122247.1:3221124-3259126
Accession: 104864713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000003341	ResIII	PF04851.15	1.1e-07	1	1
ENSFDAP00000003372	ResIII	PF04851.15	1.1e-07	1	1
ENSFDAP00000003357	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000017024	CHD5-201	5793	-	ENSFDAP00000003341	1930 (aa)	-	-
ENSFDAT00000017036	CHD5-202	6078	XM_010627897	ENSFDAP00000003357	2025 (aa)	XP_019063527	-
ENSFDAT00000017047	CHD5-203	5901	-	ENSFDAP00000003372	1966 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000012881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000012881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000012881	CHD5	76	73.418	ENSFDAG00000020219	-	95	70.311
ENSFDAG00000012881	CHD5	92	71.043	ENSFDAG00000008220	CHD3	93	69.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000012881	CHD5	95	95.005	ENSG00000116254	CHD5	99	94.982	Homo_sapiens
ENSFDAG00000012881	CHD5	97	92.587	ENSAMEG00000009880	CHD5	100	94.349	Ailuropoda_melanoleuca
ENSFDAG00000012881	CHD5	93	77.796	ENSACIG00000012582	chd5	98	78.591	Amphilophus_citrinellus
ENSFDAG00000012881	CHD5	92	79.348	ENSAOCG00000020356	chd5	90	79.271	Amphiprion_ocellaris
ENSFDAG00000012881	CHD5	96	79.937	ENSAPLG00000015475	CHD5	98	81.458	Anas_platyrhynchos
ENSFDAG00000012881	CHD5	95	84.365	ENSACAG00000002441	CHD5	99	81.837	Anolis_carolinensis
ENSFDAG00000012881	CHD5	87	94.855	ENSANAG00000001078	CHD5	91	95.269	Aotus_nancymaae
ENSFDAG00000012881	CHD5	92	75.356	ENSACLG00000003012	chd5	96	75.342	Astatotilapia_calliptera
ENSFDAG00000012881	CHD5	90	76.275	ENSAMXG00000008921	chd5	99	76.418	Astyanax_mexicanus
ENSFDAG00000012881	CHD5	93	95.273	ENSBTAG00000040477	CHD5	99	95.815	Bos_taurus
ENSFDAG00000012881	CHD5	95	94.901	ENSCJAG00000000101	CHD5	99	94.878	Callithrix_jacchus
ENSFDAG00000012881	CHD5	92	95.447	ENSCAFG00000019545	CHD5	99	95.702	Canis_familiaris
ENSFDAG00000012881	CHD5	98	93.640	ENSCAFG00020008689	CHD5	99	93.424	Canis_lupus_dingo
ENSFDAG00000012881	CHD5	95	94.472	ENSCHIG00000015027	CHD5	98	93.201	Capra_hircus
ENSFDAG00000012881	CHD5	95	89.866	ENSTSYG00000033991	CHD5	99	89.375	Carlito_syrichta
ENSFDAG00000012881	CHD5	96	95.897	ENSCAPG00000009294	CHD5	99	96.468	Cavia_aperea
ENSFDAG00000012881	CHD5	96	95.844	ENSCPOG00000025080	CHD5	99	96.468	Cavia_porcellus
ENSFDAG00000012881	CHD5	95	94.953	ENSCCAG00000024756	CHD5	99	94.930	Cebus_capucinus
ENSFDAG00000012881	CHD5	95	94.173	ENSCATG00000043011	CHD5	99	94.154	Cercocebus_atys
ENSFDAG00000012881	CHD5	96	96.840	ENSCLAG00000010589	CHD5	99	97.205	Chinchilla_lanigera
ENSFDAG00000012881	CHD5	95	95.213	ENSCSAG00000000733	CHD5	99	95.189	Chlorocebus_sabaeus
ENSFDAG00000012881	CHD5	92	89.972	ENSCPBG00000019363	CHD5	99	90.060	Chrysemys_picta_bellii
ENSFDAG00000012881	CHD5	97	93.782	ENSCANG00000032302	CHD5	99	95.436	Colobus_angolensis_palliatus
ENSFDAG00000012881	CHD5	55	96.695	ENSCGRG00001011042	Chd5	100	96.698	Cricetulus_griseus_chok1gshd
ENSFDAG00000012881	CHD5	98	93.495	ENSCGRG00000011341	Chd5	99	94.084	Cricetulus_griseus_crigri
ENSFDAG00000012881	CHD5	96	66.444	ENSDARG00000025789	chd4b	96	67.507	Danio_rerio
ENSFDAG00000012881	CHD5	95	77.435	ENSDARG00000105083	chd5	97	79.974	Danio_rerio
ENSFDAG00000012881	CHD5	91	95.857	ENSDNOG00000046342	CHD5	99	90.481	Dasypus_novemcinctus
ENSFDAG00000012881	CHD5	96	94.325	ENSDORG00000005923	Chd5	99	95.122	Dipodomys_ordii
ENSFDAG00000012881	CHD5	97	92.176	ENSEASG00005021464	CHD5	96	95.775	Equus_asinus_asinus
ENSFDAG00000012881	CHD5	98	91.410	ENSECAG00000025043	CHD5	98	95.219	Equus_caballus
ENSFDAG00000012881	CHD5	75	98.592	ENSEEUG00000002772	CHD5	77	98.592	Erinaceus_europaeus
ENSFDAG00000012881	CHD5	92	77.298	ENSELUG00000010742	chd5	95	78.079	Esox_lucius
ENSFDAG00000012881	CHD5	95	94.529	ENSFCAG00000006319	CHD5	99	93.644	Felis_catus
ENSFDAG00000012881	CHD5	97	87.076	ENSFALG00000009740	CHD5	99	87.629	Ficedula_albicollis
ENSFDAG00000012881	CHD5	97	87.260	ENSGALG00000000747	CHD5	99	87.019	Gallus_gallus
ENSFDAG00000012881	CHD5	56	82.708	ENSGACG00000004389	chd5	93	83.012	Gasterosteus_aculeatus
ENSFDAG00000012881	CHD5	87	96.517	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSFDAG00000012881	CHD5	95	95.065	ENSGGOG00000000708	CHD5	99	95.273	Gorilla_gorilla
ENSFDAG00000012881	CHD5	92	76.577	ENSHBUG00000013453	chd5	96	76.561	Haplochromis_burtoni
ENSFDAG00000012881	CHD5	97	96.588	ENSHGLG00000018184	CHD5	99	97.293	Heterocephalus_glaber_female
ENSFDAG00000012881	CHD5	98	89.012	ENSHGLG00100013261	CHD5	99	88.895	Heterocephalus_glaber_male
ENSFDAG00000012881	CHD5	94	76.915	ENSIPUG00000005446	chd5	98	78.263	Ictalurus_punctatus
ENSFDAG00000012881	CHD5	97	94.502	ENSSTOG00000002778	CHD5	99	95.581	Ictidomys_tridecemlineatus
ENSFDAG00000012881	CHD5	96	94.362	ENSJJAG00000019072	Chd5	99	94.309	Jaculus_jaculus
ENSFDAG00000012881	CHD5	95	81.166	ENSLOCG00000004944	chd5	94	82.129	Lepisosteus_oculatus
ENSFDAG00000012881	CHD5	97	94.087	ENSLAFG00000006348	CHD5	100	95.747	Loxodonta_africana
ENSFDAG00000012881	CHD5	97	93.776	ENSMFAG00000033993	CHD5	99	95.647	Macaca_fascicularis
ENSFDAG00000012881	CHD5	97	93.779	ENSMMUG00000016838	CHD5	99	95.433	Macaca_mulatta
ENSFDAG00000012881	CHD5	95	95.265	ENSMNEG00000040044	CHD5	99	95.241	Macaca_nemestrina
ENSFDAG00000012881	CHD5	95	91.902	ENSMLEG00000039166	CHD5	99	92.107	Mandrillus_leucophaeus
ENSFDAG00000012881	CHD5	87	80.910	ENSMZEG00005000841	chd5	92	80.772	Maylandia_zebra
ENSFDAG00000012881	CHD5	97	86.963	ENSMGAG00000001055	CHD5	99	87.804	Meleagris_gallopavo
ENSFDAG00000012881	CHD5	95	92.379	ENSMICG00000017862	CHD5	99	91.809	Microcebus_murinus
ENSFDAG00000012881	CHD5	96	94.669	ENSMOCG00000011049	Chd5	99	93.947	Microtus_ochrogaster
ENSFDAG00000012881	CHD5	83	80.831	ENSMODG00000006294	CHD5	78	94.342	Monodelphis_domestica
ENSFDAG00000012881	CHD5	92	78.321	ENSMALG00000002831	chd5	97	76.948	Monopterus_albus
ENSFDAG00000012881	CHD5	96	94.373	MGP_CAROLIEiJ_G0026857	Chd5	99	94.465	Mus_caroli
ENSFDAG00000012881	CHD5	96	94.007	ENSMUSG00000005045	Chd5	99	94.008	Mus_musculus
ENSFDAG00000012881	CHD5	96	94.507	MGP_PahariEiJ_G0029205	Chd5	99	94.361	Mus_pahari
ENSFDAG00000012881	CHD5	96	94.266	MGP_SPRETEiJ_G0027850	Chd5	99	94.361	Mus_spretus
ENSFDAG00000012881	CHD5	97	89.497	ENSMPUG00000007122	CHD5	99	90.946	Mustela_putorius_furo
ENSFDAG00000012881	CHD5	98	92.442	ENSNGAG00000019812	Chd5	99	92.693	Nannospalax_galili
ENSFDAG00000012881	CHD5	97	91.291	ENSNLEG00000010320	CHD5	99	92.727	Nomascus_leucogenys
ENSFDAG00000012881	CHD5	83	91.364	ENSOPRG00000004304	CHD5	87	89.272	Ochotona_princeps
ENSFDAG00000012881	CHD5	98	95.986	ENSODEG00000010262	CHD5	99	96.935	Octodon_degus
ENSFDAG00000012881	CHD5	92	77.158	ENSONIG00000000619	chd5	93	77.977	Oreochromis_niloticus
ENSFDAG00000012881	CHD5	95	72.533	ENSOANG00000001819	CHD5	98	72.909	Ornithorhynchus_anatinus
ENSFDAG00000012881	CHD5	95	93.455	ENSOGAG00000005703	CHD5	99	93.233	Otolemur_garnettii
ENSFDAG00000012881	CHD5	96	93.938	ENSOARG00000013425	CHD5	98	94.339	Ovis_aries
ENSFDAG00000012881	CHD5	95	94.964	ENSPPAG00000034048	CHD5	99	94.912	Pan_paniscus
ENSFDAG00000012881	CHD5	95	93.879	ENSPPRG00000009453	CHD5	99	93.029	Panthera_pardus
ENSFDAG00000012881	CHD5	95	86.950	ENSPTIG00000013926	CHD5	99	87.206	Panthera_tigris_altaica
ENSFDAG00000012881	CHD5	95	94.956	ENSPTRG00000000075	CHD5	99	94.674	Pan_troglodytes
ENSFDAG00000012881	CHD5	95	95.265	ENSPANG00000006765	CHD5	99	95.241	Papio_anubis
ENSFDAG00000012881	CHD5	93	78.591	ENSPKIG00000004282	chd5	98	78.571	Paramormyrops_kingsleyae
ENSFDAG00000012881	CHD5	94	82.504	ENSPSIG00000006414	CHD5	100	82.627	Pelodiscus_sinensis
ENSFDAG00000012881	CHD5	67	96.431	ENSPEMG00000014799	Chd5	100	96.096	Peromyscus_maniculatus_bairdii
ENSFDAG00000012881	CHD5	97	90.761	ENSPCIG00000028310	CHD5	97	90.848	Phascolarctos_cinereus
ENSFDAG00000012881	CHD5	92	76.502	ENSPLAG00000005343	chd5	96	76.193	Poecilia_latipinna
ENSFDAG00000012881	CHD5	95	90.161	ENSPPYG00000001952	CHD5	99	91.775	Pongo_abelii
ENSFDAG00000012881	CHD5	95	95.682	ENSPCOG00000022930	CHD5	99	95.447	Propithecus_coquereli
ENSFDAG00000012881	CHD5	92	78.611	ENSPNYG00000003183	chd5	98	77.632	Pundamilia_nyererei
ENSFDAG00000012881	CHD5	97	92.817	ENSRNOG00000011268	Chd5	99	93.844	Rattus_norvegicus
ENSFDAG00000012881	CHD5	93	96.402	ENSRBIG00000032140	CHD5	95	96.402	Rhinopithecus_bieti
ENSFDAG00000012881	CHD5	95	94.962	ENSRROG00000041146	CHD5	99	95.169	Rhinopithecus_roxellana
ENSFDAG00000012881	CHD5	96	90.293	ENSSBOG00000001955	CHD5	99	95.408	Saimiri_boliviensis_boliviensis
ENSFDAG00000012881	CHD5	95	85.614	ENSSHAG00000018641	CHD5	99	85.790	Sarcophilus_harrisii
ENSFDAG00000012881	CHD5	95	77.790	ENSSFOG00015006296	chd5	94	78.384	Scleropages_formosus
ENSFDAG00000012881	CHD5	92	79.278	ENSSDUG00000017526	chd5	97	78.330	Seriola_dumerili
ENSFDAG00000012881	CHD5	95	80.955	ENSSPUG00000010622	CHD5	98	81.095	Sphenodon_punctatus
ENSFDAG00000012881	CHD5	96	94.788	ENSSSCG00000003366	CHD5	99	95.647	Sus_scrofa
ENSFDAG00000012881	CHD5	94	83.198	ENSTGUG00000002634	-	100	83.820	Taeniopygia_guttata
ENSFDAG00000012881	CHD5	53	80.333	ENSTNIG00000004346	chd5	99	80.864	Tetraodon_nigroviridis
ENSFDAG00000012881	CHD5	96	93.826	ENSTTRG00000010468	CHD5	99	93.760	Tursiops_truncatus
ENSFDAG00000012881	CHD5	96	94.190	ENSUAMG00000024509	CHD5	99	94.447	Ursus_americanus
ENSFDAG00000012881	CHD5	94	91.254	ENSUMAG00000024173	CHD5	98	91.180	Ursus_maritimus
ENSFDAG00000012881	CHD5	98	92.699	ENSVVUG00000026480	CHD5	96	96.226	Vulpes_vulpes
ENSFDAG00000012881	CHD5	95	79.225	ENSXETG00000002904	chd5	99	80.107	Xenopus_tropicalis
ENSFDAG00000012881	CHD5	57	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus