EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000013303 (Gene tree)
Gene ID: 104870160
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 54445 bases
Position: chrKN122764.1:507747-562191
Accession: 104870160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000003959	zf-CCCH	PF00642.24	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000017562	RC3H1-201	5238	XM_010635578	ENSFDAP00000003959	1133 (aa)	XP_010633880	A0A091D8M7

Gene Model

Click here to download ENSFDAG00000013303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000013303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000013303	RC3H1	92	54.604	ENSFDAG00000012477	RC3H2	87	54.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000013303	RC3H1	100	94.974	ENSG00000135870	RC3H1	100	94.974	Homo_sapiens
ENSFDAG00000013303	RC3H1	100	94.704	ENSAMEG00000015657	RC3H1	100	94.704	Ailuropoda_melanoleuca
ENSFDAG00000013303	RC3H1	100	86.911	ENSAPLG00000005341	RC3H1	100	86.911	Anas_platyrhynchos
ENSFDAG00000013303	RC3H1	100	84.206	ENSACAG00000015271	RC3H1	100	84.017	Anolis_carolinensis
ENSFDAG00000013303	RC3H1	100	94.797	ENSANAG00000036716	RC3H1	100	94.885	Aotus_nancymaae
ENSFDAG00000013303	RC3H1	100	94.356	ENSBTAG00000052708	RC3H1	100	94.356	Bos_taurus
ENSFDAG00000013303	RC3H1	100	94.444	ENSCJAG00000009106	RC3H1	100	94.533	Callithrix_jacchus
ENSFDAG00000013303	RC3H1	100	95.057	ENSCAFG00000014434	RC3H1	100	95.057	Canis_familiaris
ENSFDAG00000013303	RC3H1	100	94.974	ENSCAFG00020017112	RC3H1	99	97.753	Canis_lupus_dingo
ENSFDAG00000013303	RC3H1	100	94.616	ENSCHIG00000002873	RC3H1	100	94.616	Capra_hircus
ENSFDAG00000013303	RC3H1	99	93.557	ENSTSYG00000003913	RC3H1	99	93.557	Carlito_syrichta
ENSFDAG00000013303	RC3H1	100	93.651	ENSCPOG00000004349	RC3H1	100	93.386	Cavia_porcellus
ENSFDAG00000013303	RC3H1	100	92.681	ENSCCAG00000025652	RC3H1	98	94.837	Cebus_capucinus
ENSFDAG00000013303	RC3H1	100	95.238	ENSCATG00000033497	RC3H1	100	95.238	Cercocebus_atys
ENSFDAG00000013303	RC3H1	100	97.176	ENSCLAG00000011267	RC3H1	100	97.176	Chinchilla_lanigera
ENSFDAG00000013303	RC3H1	96	95.400	ENSCSAG00000011823	RC3H1	85	95.400	Chlorocebus_sabaeus
ENSFDAG00000013303	RC3H1	100	88.323	ENSCPBG00000014670	RC3H1	100	88.235	Chrysemys_picta_bellii
ENSFDAG00000013303	RC3H1	100	95.154	ENSCANG00000032120	RC3H1	100	95.154	Colobus_angolensis_palliatus
ENSFDAG00000013303	RC3H1	100	93.822	ENSCGRG00001020812	Rc3h1	100	93.557	Cricetulus_griseus_chok1gshd
ENSFDAG00000013303	RC3H1	100	93.822	ENSCGRG00000011952	Rc3h1	100	93.557	Cricetulus_griseus_crigri
ENSFDAG00000013303	RC3H1	55	92.777	ENSDNOG00000011494	RC3H1	99	92.777	Dasypus_novemcinctus
ENSFDAG00000013303	RC3H1	100	94.175	ENSDORG00000004855	Rc3h1	100	94.086	Dipodomys_ordii
ENSFDAG00000013303	RC3H1	82	95.335	ENSETEG00000012064	RC3H1	87	95.335	Echinops_telfairi
ENSFDAG00000013303	RC3H1	100	93.998	ENSEASG00005017000	RC3H1	100	93.998	Equus_asinus_asinus
ENSFDAG00000013303	RC3H1	100	93.910	ENSECAG00000021208	RC3H1	100	93.910	Equus_caballus
ENSFDAG00000013303	RC3H1	89	82.746	ENSEEUG00000014861	RC3H1	93	82.746	Erinaceus_europaeus
ENSFDAG00000013303	RC3H1	100	95.503	ENSFCAG00000014924	RC3H1	100	95.503	Felis_catus
ENSFDAG00000013303	RC3H1	100	86.364	ENSFALG00000002947	RC3H1	100	85.927	Ficedula_albicollis
ENSFDAG00000013303	RC3H1	100	86.404	ENSGALG00000004587	RC3H1	100	86.404	Gallus_gallus
ENSFDAG00000013303	RC3H1	100	86.655	ENSGAGG00000018194	RC3H1	100	86.831	Gopherus_agassizii
ENSFDAG00000013303	RC3H1	100	88.489	ENSGGOG00000005735	RC3H1	100	88.489	Gorilla_gorilla
ENSFDAG00000013303	RC3H1	88	90.798	ENSHGLG00000004183	-	99	90.761	Heterocephalus_glaber_female
ENSFDAG00000013303	RC3H1	100	97.352	ENSHGLG00100008577	RC3H1	100	97.352	Heterocephalus_glaber_male
ENSFDAG00000013303	RC3H1	100	94.885	ENSSTOG00000016033	RC3H1	100	94.797	Ictidomys_tridecemlineatus
ENSFDAG00000013303	RC3H1	100	93.733	ENSJJAG00000018915	Rc3h1	100	93.380	Jaculus_jaculus
ENSFDAG00000013303	RC3H1	100	74.174	ENSLACG00000016186	RC3H1	100	77.463	Latimeria_chalumnae
ENSFDAG00000013303	RC3H1	97	95.446	ENSLAFG00000004367	RC3H1	100	95.446	Loxodonta_africana
ENSFDAG00000013303	RC3H1	100	95.150	ENSMFAG00000033725	RC3H1	100	95.150	Macaca_fascicularis
ENSFDAG00000013303	RC3H1	100	95.238	ENSMMUG00000000630	RC3H1	100	95.238	Macaca_mulatta
ENSFDAG00000013303	RC3H1	100	95.238	ENSMNEG00000035968	RC3H1	100	95.238	Macaca_nemestrina
ENSFDAG00000013303	RC3H1	100	95.150	ENSMLEG00000037455	RC3H1	100	95.150	Mandrillus_leucophaeus
ENSFDAG00000013303	RC3H1	88	94.159	ENSMAUG00000020864	Rc3h1	93	93.857	Mesocricetus_auratus
ENSFDAG00000013303	RC3H1	100	95.410	ENSMICG00000003000	RC3H1	100	95.410	Microcebus_murinus
ENSFDAG00000013303	RC3H1	93	92.140	ENSMOCG00000016587	Rc3h1	98	91.951	Microtus_ochrogaster
ENSFDAG00000013303	RC3H1	100	90.837	ENSMODG00000004289	RC3H1	100	90.925	Monodelphis_domestica
ENSFDAG00000013303	RC3H1	100	92.763	MGP_CAROLIEiJ_G0014756	Rc3h1	100	92.498	Mus_caroli
ENSFDAG00000013303	RC3H1	100	92.498	ENSMUSG00000040423	Rc3h1	100	92.233	Mus_musculus
ENSFDAG00000013303	RC3H1	100	92.410	MGP_PahariEiJ_G0027992	Rc3h1	100	92.145	Mus_pahari
ENSFDAG00000013303	RC3H1	100	92.321	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.056	Mus_spretus
ENSFDAG00000013303	RC3H1	100	94.533	ENSMPUG00000004747	RC3H1	100	94.351	Mustela_putorius_furo
ENSFDAG00000013303	RC3H1	100	93.733	ENSMLUG00000011127	RC3H1	100	93.733	Myotis_lucifugus
ENSFDAG00000013303	RC3H1	100	94.704	ENSNGAG00000011135	Rc3h1	100	94.440	Nannospalax_galili
ENSFDAG00000013303	RC3H1	100	94.885	ENSNLEG00000015327	RC3H1	100	94.885	Nomascus_leucogenys
ENSFDAG00000013303	RC3H1	99	81.609	ENSOPRG00000013068	RC3H1	99	81.256	Ochotona_princeps
ENSFDAG00000013303	RC3H1	100	96.734	ENSODEG00000014185	RC3H1	100	96.734	Octodon_degus
ENSFDAG00000013303	RC3H1	100	89.607	ENSOANG00000000924	RC3H1	100	89.782	Ornithorhynchus_anatinus
ENSFDAG00000013303	RC3H1	99	94.181	ENSOCUG00000004930	RC3H1	98	94.181	Oryctolagus_cuniculus
ENSFDAG00000013303	RC3H1	100	88.106	ENSOGAG00000004044	RC3H1	100	88.106	Otolemur_garnettii
ENSFDAG00000013303	RC3H1	100	94.566	ENSOARG00000013011	RC3H1	100	94.566	Ovis_aries
ENSFDAG00000013303	RC3H1	100	94.978	ENSPPAG00000039253	RC3H1	100	94.978	Pan_paniscus
ENSFDAG00000013303	RC3H1	100	94.793	ENSPPRG00000009007	RC3H1	100	94.793	Panthera_pardus
ENSFDAG00000013303	RC3H1	100	95.167	ENSPTIG00000015326	RC3H1	100	95.167	Panthera_tigris_altaica
ENSFDAG00000013303	RC3H1	100	94.978	ENSPTRG00000001702	RC3H1	100	94.978	Pan_troglodytes
ENSFDAG00000013303	RC3H1	100	95.150	ENSPANG00000008886	RC3H1	100	95.150	Papio_anubis
ENSFDAG00000013303	RC3H1	100	87.807	ENSPSIG00000016181	RC3H1	100	88.070	Pelodiscus_sinensis
ENSFDAG00000013303	RC3H1	100	92.851	ENSPEMG00000011966	Rc3h1	100	92.674	Peromyscus_maniculatus_bairdii
ENSFDAG00000013303	RC3H1	70	93.173	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSFDAG00000013303	RC3H1	100	91.799	ENSPPYG00000000490	RC3H1	98	94.551	Pongo_abelii
ENSFDAG00000013303	RC3H1	81	97.368	ENSPCAG00000010775	RC3H1	87	97.368	Procavia_capensis
ENSFDAG00000013303	RC3H1	83	94.444	ENSPCOG00000021795	RC3H1	96	94.444	Propithecus_coquereli
ENSFDAG00000013303	RC3H1	100	86.143	ENSPVAG00000007593	RC3H1	100	86.143	Pteropus_vampyrus
ENSFDAG00000013303	RC3H1	97	61.478	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSFDAG00000013303	RC3H1	100	95.154	ENSRBIG00000037743	RC3H1	100	95.154	Rhinopithecus_bieti
ENSFDAG00000013303	RC3H1	100	95.150	ENSRROG00000036546	RC3H1	100	95.150	Rhinopithecus_roxellana
ENSFDAG00000013303	RC3H1	93	84.637	ENSSBOG00000010664	RC3H1	100	88.647	Saimiri_boliviensis_boliviensis
ENSFDAG00000013303	RC3H1	100	89.877	ENSSHAG00000007589	RC3H1	100	89.965	Sarcophilus_harrisii
ENSFDAG00000013303	RC3H1	87	86.486	ENSSARG00000004660	RC3H1	86	86.486	Sorex_araneus
ENSFDAG00000013303	RC3H1	100	83.246	ENSSPUG00000018472	RC3H1	100	82.807	Sphenodon_punctatus
ENSFDAG00000013303	RC3H1	100	95.146	ENSSSCG00000015498	RC3H1	100	95.146	Sus_scrofa
ENSFDAG00000013303	RC3H1	100	86.743	ENSTGUG00000004090	RC3H1	100	86.655	Taeniopygia_guttata
ENSFDAG00000013303	RC3H1	93	89.716	ENSTBEG00000005015	RC3H1	93	89.716	Tupaia_belangeri
ENSFDAG00000013303	RC3H1	100	94.718	ENSTTRG00000008572	RC3H1	100	94.718	Tursiops_truncatus
ENSFDAG00000013303	RC3H1	100	94.175	ENSUAMG00000019525	RC3H1	100	94.175	Ursus_americanus
ENSFDAG00000013303	RC3H1	100	94.621	ENSUMAG00000020087	RC3H1	100	94.621	Ursus_maritimus
ENSFDAG00000013303	RC3H1	91	98.198	ENSVPAG00000002591	RC3H1	92	98.198	Vicugna_pacos
ENSFDAG00000013303	RC3H1	100	94.723	ENSVVUG00000014201	RC3H1	100	94.723	Vulpes_vulpes
ENSFDAG00000013303	RC3H1	100	78.348	ENSXETG00000020030	rc3h1	100	77.875	Xenopus_tropicalis