EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000013398 (Gene tree)
Gene ID: 104859771
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 2096 bases
Position: chrKN121905.1:1147991-1150086
Accession: 104859771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000004105	PseudoU_synth_2	PF00849.22	9.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000017689	RPUSD1-201	1079	XM_010620545	ENSFDAP00000004105	306 (aa)	XP_010618847	A0A091DWF4

Gene Model

Click here to download ENSFDAG00000013398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000013398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000013398	RPUSD1	100	82.692	ENSG00000007376	RPUSD1	100	88.690	Homo_sapiens
ENSFDAG00000013398	RPUSD1	98	56.291	ENSAPOG00000022221	rpusd1	98	56.291	Acanthochromis_polyacanthus
ENSFDAG00000013398	RPUSD1	100	82.680	ENSAMEG00000007461	RPUSD1	100	82.680	Ailuropoda_melanoleuca
ENSFDAG00000013398	RPUSD1	98	57.516	ENSACIG00000015863	rpusd1	98	57.516	Amphilophus_citrinellus
ENSFDAG00000013398	RPUSD1	98	56.721	ENSAOCG00000021975	rpusd1	95	56.721	Amphiprion_ocellaris
ENSFDAG00000013398	RPUSD1	98	56.393	ENSAPEG00000001316	rpusd1	95	56.393	Amphiprion_percula
ENSFDAG00000013398	RPUSD1	83	64.427	ENSATEG00000002984	rpusd1	98	57.705	Anabas_testudineus
ENSFDAG00000013398	RPUSD1	78	58.065	ENSAPLG00000012316	RPUSD1	100	58.065	Anas_platyrhynchos
ENSFDAG00000013398	RPUSD1	99	66.997	ENSACAG00000008953	RPUSD1	100	66.997	Anolis_carolinensis
ENSFDAG00000013398	RPUSD1	100	83.333	ENSANAG00000024709	RPUSD1	100	84.936	Aotus_nancymaae
ENSFDAG00000013398	RPUSD1	98	55.696	ENSACLG00000013692	rpusd1	98	57.980	Astatotilapia_calliptera
ENSFDAG00000013398	RPUSD1	99	58.746	ENSAMXG00000019802	rpusd1	100	58.746	Astyanax_mexicanus
ENSFDAG00000013398	RPUSD1	100	84.740	ENSBTAG00000000179	RPUSD1	100	86.039	Bos_taurus
ENSFDAG00000013398	RPUSD1	100	83.333	ENSCJAG00000012253	RPUSD1	100	84.295	Callithrix_jacchus
ENSFDAG00000013398	RPUSD1	100	83.007	ENSCAFG00000019614	RPUSD1	100	83.333	Canis_familiaris
ENSFDAG00000013398	RPUSD1	100	83.007	ENSCAFG00020008891	RPUSD1	100	83.333	Canis_lupus_dingo
ENSFDAG00000013398	RPUSD1	100	84.091	ENSCHIG00000012872	RPUSD1	100	85.390	Capra_hircus
ENSFDAG00000013398	RPUSD1	100	84.967	ENSTSYG00000036934	RPUSD1	100	84.967	Carlito_syrichta
ENSFDAG00000013398	RPUSD1	100	96.078	ENSCAPG00000014219	RPUSD1	100	96.078	Cavia_aperea
ENSFDAG00000013398	RPUSD1	100	96.078	ENSCPOG00000034604	RPUSD1	100	96.078	Cavia_porcellus
ENSFDAG00000013398	RPUSD1	100	84.295	ENSCCAG00000034385	RPUSD1	100	85.256	Cebus_capucinus
ENSFDAG00000013398	RPUSD1	100	83.654	ENSCATG00000042983	RPUSD1	100	84.615	Cercocebus_atys
ENSFDAG00000013398	RPUSD1	100	96.405	ENSCLAG00000013966	RPUSD1	100	96.405	Chinchilla_lanigera
ENSFDAG00000013398	RPUSD1	100	83.333	ENSCSAG00000012121	RPUSD1	100	84.295	Chlorocebus_sabaeus
ENSFDAG00000013398	RPUSD1	99	64.169	ENSCPBG00000021101	RPUSD1	99	64.169	Chrysemys_picta_bellii
ENSFDAG00000013398	RPUSD1	92	86.833	ENSCANG00000028576	RPUSD1	100	86.833	Colobus_angolensis_palliatus
ENSFDAG00000013398	RPUSD1	100	85.621	ENSCGRG00001014253	Rpusd1	100	85.621	Cricetulus_griseus_chok1gshd
ENSFDAG00000013398	RPUSD1	100	85.621	ENSCGRG00000017995	Rpusd1	100	85.621	Cricetulus_griseus_crigri
ENSFDAG00000013398	RPUSD1	99	56.066	ENSCSEG00000018512	rpusd1	100	56.066	Cynoglossus_semilaevis
ENSFDAG00000013398	RPUSD1	98	57.000	ENSCVAG00000022746	rpusd1	98	57.000	Cyprinodon_variegatus
ENSFDAG00000013398	RPUSD1	99	60.396	ENSDARG00000060192	rpusd1	100	60.396	Danio_rerio
ENSFDAG00000013398	RPUSD1	100	80.000	ENSDNOG00000003721	RPUSD1	100	80.769	Dasypus_novemcinctus
ENSFDAG00000013398	RPUSD1	100	86.928	ENSDORG00000026656	Rpusd1	100	87.908	Dipodomys_ordii
ENSFDAG00000013398	RPUSD1	99	46.708	ENSEBUG00000008767	rpusd1	94	46.708	Eptatretus_burgeri
ENSFDAG00000013398	RPUSD1	100	83.544	ENSEASG00005018421	RPUSD1	76	84.810	Equus_asinus_asinus
ENSFDAG00000013398	RPUSD1	83	59.843	ENSELUG00000014307	rpusd1	88	54.426	Esox_lucius
ENSFDAG00000013398	RPUSD1	100	82.680	ENSFCAG00000010359	RPUSD1	100	82.680	Felis_catus
ENSFDAG00000013398	RPUSD1	99	65.347	ENSFALG00000003211	RPUSD1	100	65.347	Ficedula_albicollis
ENSFDAG00000013398	RPUSD1	98	55.776	ENSFHEG00000004736	rpusd1	98	55.776	Fundulus_heteroclitus
ENSFDAG00000013398	RPUSD1	83	62.846	ENSGMOG00000010756	rpusd1	98	56.250	Gadus_morhua
ENSFDAG00000013398	RPUSD1	99	63.754	ENSGALG00000005315	RPUSD1	100	63.754	Gallus_gallus
ENSFDAG00000013398	RPUSD1	98	57.333	ENSGAFG00000009886	rpusd1	98	57.333	Gambusia_affinis
ENSFDAG00000013398	RPUSD1	82	62.948	ENSGACG00000014276	rpusd1	97	56.106	Gasterosteus_aculeatus
ENSFDAG00000013398	RPUSD1	99	63.518	ENSGAGG00000004181	RPUSD1	99	63.518	Gopherus_agassizii
ENSFDAG00000013398	RPUSD1	100	82.372	ENSGGOG00000013997	RPUSD1	100	83.333	Gorilla_gorilla
ENSFDAG00000013398	RPUSD1	98	55.380	ENSHBUG00000023728	rpusd1	98	57.655	Haplochromis_burtoni
ENSFDAG00000013398	RPUSD1	100	97.712	ENSHGLG00000002595	RPUSD1	100	97.712	Heterocephalus_glaber_female
ENSFDAG00000013398	RPUSD1	100	97.712	ENSHGLG00100014303	RPUSD1	100	97.712	Heterocephalus_glaber_male
ENSFDAG00000013398	RPUSD1	98	57.475	ENSHCOG00000002390	rpusd1	99	57.475	Hippocampus_comes
ENSFDAG00000013398	RPUSD1	99	59.868	ENSIPUG00000001570	rpusd1	99	59.736	Ictalurus_punctatus
ENSFDAG00000013398	RPUSD1	100	89.216	ENSSTOG00000004276	RPUSD1	100	89.216	Ictidomys_tridecemlineatus
ENSFDAG00000013398	RPUSD1	100	88.562	ENSJJAG00000015696	Rpusd1	100	88.562	Jaculus_jaculus
ENSFDAG00000013398	RPUSD1	98	57.000	ENSKMAG00000017287	rpusd1	98	57.000	Kryptolebias_marmoratus
ENSFDAG00000013398	RPUSD1	98	55.738	ENSLBEG00000022502	rpusd1	98	56.393	Labrus_bergylta
ENSFDAG00000013398	RPUSD1	98	55.738	ENSLBEG00000013354	RPUSD1	98	56.393	Labrus_bergylta
ENSFDAG00000013398	RPUSD1	99	60.328	ENSLACG00000008869	RPUSD1	99	60.328	Latimeria_chalumnae
ENSFDAG00000013398	RPUSD1	71	72.685	ENSLOCG00000005682	rpusd1	99	72.685	Lepisosteus_oculatus
ENSFDAG00000013398	RPUSD1	100	80.065	ENSLAFG00000002115	RPUSD1	100	80.065	Loxodonta_africana
ENSFDAG00000013398	RPUSD1	100	83.654	ENSMFAG00000003961	RPUSD1	100	84.615	Macaca_fascicularis
ENSFDAG00000013398	RPUSD1	100	83.654	ENSMMUG00000000842	RPUSD1	100	84.615	Macaca_mulatta
ENSFDAG00000013398	RPUSD1	100	83.654	ENSMNEG00000042712	RPUSD1	100	84.615	Macaca_nemestrina
ENSFDAG00000013398	RPUSD1	100	83.654	ENSMLEG00000030591	RPUSD1	100	84.615	Mandrillus_leucophaeus
ENSFDAG00000013398	RPUSD1	83	64.427	ENSMAMG00000004735	rpusd1	98	58.170	Mastacembelus_armatus
ENSFDAG00000013398	RPUSD1	98	55.696	ENSMZEG00005003214	rpusd1	98	57.980	Maylandia_zebra
ENSFDAG00000013398	RPUSD1	97	63.696	ENSMGAG00000005447	RPUSD1	99	63.696	Meleagris_gallopavo
ENSFDAG00000013398	RPUSD1	86	80.534	ENSMAUG00000019998	Rpusd1	100	80.534	Mesocricetus_auratus
ENSFDAG00000013398	RPUSD1	100	85.714	ENSMICG00000017561	RPUSD1	100	85.897	Microcebus_murinus
ENSFDAG00000013398	RPUSD1	100	88.235	ENSMOCG00000014082	Rpusd1	100	88.235	Microtus_ochrogaster
ENSFDAG00000013398	RPUSD1	80	65.306	ENSMMOG00000012569	rpusd1	99	57.333	Mola_mola
ENSFDAG00000013398	RPUSD1	100	68.710	ENSMODG00000016882	RPUSD1	100	69.032	Monodelphis_domestica
ENSFDAG00000013398	RPUSD1	98	57.516	ENSMALG00000017818	rpusd1	98	57.516	Monopterus_albus
ENSFDAG00000013398	RPUSD1	100	88.235	MGP_CAROLIEiJ_G0021244	Rpusd1	100	88.235	Mus_caroli
ENSFDAG00000013398	RPUSD1	100	88.235	ENSMUSG00000041199	Rpusd1	100	88.235	Mus_musculus
ENSFDAG00000013398	RPUSD1	100	86.688	MGP_PahariEiJ_G0023562	Rpusd1	100	86.688	Mus_pahari
ENSFDAG00000013398	RPUSD1	100	88.235	MGP_SPRETEiJ_G0022155	Rpusd1	100	88.235	Mus_spretus
ENSFDAG00000013398	RPUSD1	100	83.007	ENSMPUG00000015897	RPUSD1	100	83.333	Mustela_putorius_furo
ENSFDAG00000013398	RPUSD1	100	85.256	ENSMLUG00000001089	RPUSD1	100	86.218	Myotis_lucifugus
ENSFDAG00000013398	RPUSD1	100	87.582	ENSNGAG00000003595	Rpusd1	100	87.582	Nannospalax_galili
ENSFDAG00000013398	RPUSD1	98	50.789	ENSNBRG00000006457	rpusd1	98	57.333	Neolamprologus_brichardi
ENSFDAG00000013398	RPUSD1	55	77.714	ENSNLEG00000008424	-	100	78.857	Nomascus_leucogenys
ENSFDAG00000013398	RPUSD1	100	68.489	ENSMEUG00000016049	RPUSD1	100	68.489	Notamacropus_eugenii
ENSFDAG00000013398	RPUSD1	99	78.289	ENSOPRG00000008340	RPUSD1	99	78.289	Ochotona_princeps
ENSFDAG00000013398	RPUSD1	100	94.118	ENSODEG00000016945	RPUSD1	100	94.118	Octodon_degus
ENSFDAG00000013398	RPUSD1	98	54.430	ENSONIG00000015672	rpusd1	99	56.678	Oreochromis_niloticus
ENSFDAG00000013398	RPUSD1	99	57.980	ENSORLG00000013009	rpusd1	99	57.980	Oryzias_latipes
ENSFDAG00000013398	RPUSD1	99	57.655	ENSORLG00020010382	rpusd1	99	57.655	Oryzias_latipes_hni
ENSFDAG00000013398	RPUSD1	99	57.003	ENSORLG00015021354	rpusd1	99	57.003	Oryzias_latipes_hsok
ENSFDAG00000013398	RPUSD1	98	58.528	ENSOMEG00000021426	rpusd1	98	58.528	Oryzias_melastigma
ENSFDAG00000013398	RPUSD1	100	87.500	ENSOGAG00000003795	RPUSD1	100	87.500	Otolemur_garnettii
ENSFDAG00000013398	RPUSD1	100	84.091	ENSOARG00000014254	RPUSD1	100	85.390	Ovis_aries
ENSFDAG00000013398	RPUSD1	100	82.372	ENSPPAG00000034797	RPUSD1	100	83.333	Pan_paniscus
ENSFDAG00000013398	RPUSD1	100	82.353	ENSPPRG00000012389	RPUSD1	100	82.353	Panthera_pardus
ENSFDAG00000013398	RPUSD1	100	82.026	ENSPTIG00000008545	RPUSD1	92	82.026	Panthera_tigris_altaica
ENSFDAG00000013398	RPUSD1	100	82.372	ENSPTRG00000007565	RPUSD1	100	83.333	Pan_troglodytes
ENSFDAG00000013398	RPUSD1	100	83.013	ENSPANG00000024401	RPUSD1	100	83.974	Papio_anubis
ENSFDAG00000013398	RPUSD1	99	60.000	ENSPKIG00000018890	rpusd1	91	60.000	Paramormyrops_kingsleyae
ENSFDAG00000013398	RPUSD1	99	64.286	ENSPSIG00000013945	RPUSD1	100	64.286	Pelodiscus_sinensis
ENSFDAG00000013398	RPUSD1	98	58.194	ENSPMGG00000014950	rpusd1	98	58.194	Periophthalmus_magnuspinnatus
ENSFDAG00000013398	RPUSD1	100	87.255	ENSPEMG00000000497	Rpusd1	100	87.255	Peromyscus_maniculatus_bairdii
ENSFDAG00000013398	RPUSD1	84	55.212	ENSPMAG00000001563	rpusd1	84	55.212	Petromyzon_marinus
ENSFDAG00000013398	RPUSD1	100	68.371	ENSPCIG00000021216	-	94	68.371	Phascolarctos_cinereus
ENSFDAG00000013398	RPUSD1	98	57.525	ENSPFOG00000007946	rpusd1	98	57.525	Poecilia_formosa
ENSFDAG00000013398	RPUSD1	98	57.525	ENSPLAG00000011925	rpusd1	98	57.525	Poecilia_latipinna
ENSFDAG00000013398	RPUSD1	98	57.191	ENSPMEG00000002910	rpusd1	98	57.191	Poecilia_mexicana
ENSFDAG00000013398	RPUSD1	98	57.667	ENSPREG00000019851	rpusd1	98	57.667	Poecilia_reticulata
ENSFDAG00000013398	RPUSD1	100	66.667	ENSPCAG00000002258	RPUSD1	100	66.667	Procavia_capensis
ENSFDAG00000013398	RPUSD1	100	87.220	ENSPCOG00000022582	RPUSD1	100	87.500	Propithecus_coquereli
ENSFDAG00000013398	RPUSD1	100	81.410	ENSPVAG00000013104	RPUSD1	100	82.372	Pteropus_vampyrus
ENSFDAG00000013398	RPUSD1	98	57.191	ENSPNYG00000024076	rpusd1	98	57.655	Pundamilia_nyererei
ENSFDAG00000013398	RPUSD1	99	57.426	ENSPNAG00000013806	rpusd1	100	57.426	Pygocentrus_nattereri
ENSFDAG00000013398	RPUSD1	100	87.908	ENSRNOG00000023639	Rpusd1	100	87.908	Rattus_norvegicus
ENSFDAG00000013398	RPUSD1	100	83.333	ENSRBIG00000030238	RPUSD1	100	84.295	Rhinopithecus_bieti
ENSFDAG00000013398	RPUSD1	100	83.333	ENSRROG00000036663	RPUSD1	100	84.295	Rhinopithecus_roxellana
ENSFDAG00000013398	RPUSD1	100	84.314	ENSSBOG00000033063	RPUSD1	100	84.641	Saimiri_boliviensis_boliviensis
ENSFDAG00000013398	RPUSD1	100	67.732	ENSSHAG00000013500	RPUSD1	100	67.732	Sarcophilus_harrisii
ENSFDAG00000013398	RPUSD1	99	60.855	ENSSFOG00015014394	rpusd1	99	60.855	Scleropages_formosus
ENSFDAG00000013398	RPUSD1	98	56.311	ENSSMAG00000008045	rpusd1	91	56.311	Scophthalmus_maximus
ENSFDAG00000013398	RPUSD1	83	65.217	ENSSDUG00000001829	rpusd1	95	58.361	Seriola_dumerili
ENSFDAG00000013398	RPUSD1	83	65.217	ENSSLDG00000020853	rpusd1	95	58.361	Seriola_lalandi_dorsalis
ENSFDAG00000013398	RPUSD1	55	87.425	ENSSARG00000011187	-	100	87.425	Sorex_araneus
ENSFDAG00000013398	RPUSD1	63	52.500	ENSSPUG00000005119	-	100	52.500	Sphenodon_punctatus
ENSFDAG00000013398	RPUSD1	98	57.705	ENSSPAG00000012708	rpusd1	98	58.361	Stegastes_partitus
ENSFDAG00000013398	RPUSD1	100	83.013	ENSSSCG00000008000	RPUSD1	99	86.770	Sus_scrofa
ENSFDAG00000013398	RPUSD1	83	71.765	ENSTGUG00000015375	RPUSD1	100	71.765	Taeniopygia_guttata
ENSFDAG00000013398	RPUSD1	98	56.536	ENSTRUG00000003041	rpusd1	98	56.536	Takifugu_rubripes
ENSFDAG00000013398	RPUSD1	98	54.000	ENSTNIG00000002660	rpusd1	99	54.000	Tetraodon_nigroviridis
ENSFDAG00000013398	RPUSD1	100	84.936	ENSTTRG00000010167	RPUSD1	100	84.936	Tursiops_truncatus
ENSFDAG00000013398	RPUSD1	100	82.680	ENSUAMG00000012736	RPUSD1	100	83.007	Ursus_americanus
ENSFDAG00000013398	RPUSD1	100	82.680	ENSUMAG00000021174	RPUSD1	100	83.007	Ursus_maritimus
ENSFDAG00000013398	RPUSD1	100	82.736	ENSVVUG00000012357	RPUSD1	100	82.736	Vulpes_vulpes
ENSFDAG00000013398	RPUSD1	100	59.477	ENSXETG00000007184	rpusd1	100	59.477	Xenopus_tropicalis
ENSFDAG00000013398	RPUSD1	98	56.667	ENSXCOG00000017930	rpusd1	98	56.667	Xiphophorus_couchianus
ENSFDAG00000013398	RPUSD1	98	57.000	ENSXMAG00000024084	rpusd1	98	57.000	Xiphophorus_maculatus