EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000013399 (Gene tree)
Gene ID: 104857342
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 83283 bases
Position: chrKN121439.1:209146-292428
Accession: 104857342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000003684	Not1	PF04054.15	7.9e-153	1	1
ENSFDAP00000003660	Not1	PF04054.15	1.1e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000028940	CNOT1-202	7666	XM_010617173	ENSFDAP00000003684	2376 (aa)	XP_010615475	UPI00053F9BB4
ENSFDAT00000017304	CNOT1-201	6981	-	ENSFDAP00000003660	2326 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000013399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000013399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000013399	CNOT1	100	99.579	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSFDAG00000013399	CNOT1	97	97.055	ENSAPOG00000005042	cnot1	100	97.055	Acanthochromis_polyacanthus
ENSFDAG00000013399	CNOT1	100	99.411	ENSAMEG00000017298	CNOT1	100	99.411	Ailuropoda_melanoleuca
ENSFDAG00000013399	CNOT1	90	89.888	ENSACIG00000016003	cnot1	100	90.214	Amphilophus_citrinellus
ENSFDAG00000013399	CNOT1	100	90.512	ENSAPEG00000022342	cnot1	100	90.470	Amphiprion_percula
ENSFDAG00000013399	CNOT1	97	97.195	ENSATEG00000012892	cnot1	100	97.195	Anabas_testudineus
ENSFDAG00000013399	CNOT1	100	97.605	ENSAPLG00000007162	CNOT1	100	97.605	Anas_platyrhynchos
ENSFDAG00000013399	CNOT1	92	95.826	ENSACAG00000001602	CNOT1	98	96.058	Anolis_carolinensis
ENSFDAG00000013399	CNOT1	100	98.194	ENSANAG00000038198	CNOT1	100	98.194	Aotus_nancymaae
ENSFDAG00000013399	CNOT1	97	97.195	ENSACLG00000014234	cnot1	100	97.195	Astatotilapia_calliptera
ENSFDAG00000013399	CNOT1	100	90.955	ENSAMXG00000013170	cnot1	100	91.463	Astyanax_mexicanus
ENSFDAG00000013399	CNOT1	100	99.747	ENSBTAG00000020782	CNOT1	100	99.747	Bos_taurus
ENSFDAG00000013399	CNOT1	81	40.440	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSFDAG00000013399	CNOT1	100	99.537	ENSCJAG00000011318	CNOT1	100	99.537	Callithrix_jacchus
ENSFDAG00000013399	CNOT1	100	99.328	ENSCAFG00000008426	CNOT1	100	99.328	Canis_familiaris
ENSFDAG00000013399	CNOT1	100	99.613	ENSCAFG00020010156	CNOT1	100	99.613	Canis_lupus_dingo
ENSFDAG00000013399	CNOT1	100	99.747	ENSCHIG00000010452	CNOT1	100	99.747	Capra_hircus
ENSFDAG00000013399	CNOT1	100	99.705	ENSTSYG00000006888	CNOT1	100	99.705	Carlito_syrichta
ENSFDAG00000013399	CNOT1	100	95.202	ENSCPOG00000013026	CNOT1	100	95.202	Cavia_porcellus
ENSFDAG00000013399	CNOT1	100	97.980	ENSCCAG00000026333	CNOT1	100	97.980	Cebus_capucinus
ENSFDAG00000013399	CNOT1	100	99.621	ENSCATG00000032625	CNOT1	100	99.621	Cercocebus_atys
ENSFDAG00000013399	CNOT1	100	99.916	ENSCLAG00000006289	CNOT1	100	99.916	Chinchilla_lanigera
ENSFDAG00000013399	CNOT1	100	99.621	ENSCSAG00000004731	CNOT1	100	99.621	Chlorocebus_sabaeus
ENSFDAG00000013399	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSFDAG00000013399	CNOT1	98	95.837	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSFDAG00000013399	CNOT1	100	59.119	ENSCING00000009149	-	100	58.946	Ciona_intestinalis
ENSFDAG00000013399	CNOT1	89	63.067	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSFDAG00000013399	CNOT1	100	97.731	ENSCANG00000040534	CNOT1	100	97.731	Colobus_angolensis_palliatus
ENSFDAG00000013399	CNOT1	100	99.411	ENSCGRG00001016365	Cnot1	100	99.411	Cricetulus_griseus_chok1gshd
ENSFDAG00000013399	CNOT1	100	99.411	ENSCGRG00000001714	Cnot1	100	99.411	Cricetulus_griseus_crigri
ENSFDAG00000013399	CNOT1	97	96.494	ENSCVAG00000018930	cnot1	100	96.494	Cyprinodon_variegatus
ENSFDAG00000013399	CNOT1	100	89.899	ENSDARG00000004174	cnot1	100	89.816	Danio_rerio
ENSFDAG00000013399	CNOT1	100	97.097	ENSDNOG00000013250	CNOT1	100	97.097	Dasypus_novemcinctus
ENSFDAG00000013399	CNOT1	99	46.230	FBgn0085436	Not1	99	48.431	Drosophila_melanogaster
ENSFDAG00000013399	CNOT1	84	97.440	ENSETEG00000012806	CNOT1	84	97.440	Echinops_telfairi
ENSFDAG00000013399	CNOT1	81	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSFDAG00000013399	CNOT1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSFDAG00000013399	CNOT1	100	99.705	ENSECAG00000009889	CNOT1	100	99.705	Equus_caballus
ENSFDAG00000013399	CNOT1	90	99.216	ENSEEUG00000006015	CNOT1	90	99.216	Erinaceus_europaeus
ENSFDAG00000013399	CNOT1	100	89.776	ENSELUG00000014085	cnot1	100	89.458	Esox_lucius
ENSFDAG00000013399	CNOT1	100	99.413	ENSFCAG00000025155	CNOT1	100	99.413	Felis_catus
ENSFDAG00000013399	CNOT1	100	97.685	ENSFALG00000007285	CNOT1	100	97.685	Ficedula_albicollis
ENSFDAG00000013399	CNOT1	100	90.298	ENSFHEG00000020574	cnot1	100	90.298	Fundulus_heteroclitus
ENSFDAG00000013399	CNOT1	92	89.703	ENSGMOG00000012864	cnot1	100	90.074	Gadus_morhua
ENSFDAG00000013399	CNOT1	100	97.685	ENSGALG00000002301	CNOT1	100	97.685	Gallus_gallus
ENSFDAG00000013399	CNOT1	100	89.211	ENSGAFG00000015005	cnot1	100	89.169	Gambusia_affinis
ENSFDAG00000013399	CNOT1	92	90.403	ENSGACG00000002606	cnot1	100	95.874	Gasterosteus_aculeatus
ENSFDAG00000013399	CNOT1	100	97.812	ENSGAGG00000022646	CNOT1	100	97.812	Gopherus_agassizii
ENSFDAG00000013399	CNOT1	100	99.537	ENSGGOG00000009547	CNOT1	100	99.537	Gorilla_gorilla
ENSFDAG00000013399	CNOT1	97	97.195	ENSHBUG00000001729	cnot1	100	97.195	Haplochromis_burtoni
ENSFDAG00000013399	CNOT1	100	99.747	ENSHGLG00000014322	CNOT1	100	99.747	Heterocephalus_glaber_female
ENSFDAG00000013399	CNOT1	100	89.423	ENSHCOG00000006501	cnot1	100	89.520	Hippocampus_comes
ENSFDAG00000013399	CNOT1	100	88.842	ENSIPUG00000011915	cnot1	100	89.304	Ictalurus_punctatus
ENSFDAG00000013399	CNOT1	100	99.747	ENSSTOG00000005490	CNOT1	100	99.747	Ictidomys_tridecemlineatus
ENSFDAG00000013399	CNOT1	100	99.183	ENSJJAG00000000633	Cnot1	100	99.183	Jaculus_jaculus
ENSFDAG00000013399	CNOT1	100	90.213	ENSKMAG00000006149	cnot1	100	90.092	Kryptolebias_marmoratus
ENSFDAG00000013399	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSFDAG00000013399	CNOT1	100	95.076	ENSLACG00000010869	CNOT1	100	95.076	Latimeria_chalumnae
ENSFDAG00000013399	CNOT1	100	92.995	ENSLOCG00000006324	cnot1	100	92.995	Lepisosteus_oculatus
ENSFDAG00000013399	CNOT1	100	99.453	ENSLAFG00000000098	CNOT1	100	99.453	Loxodonta_africana
ENSFDAG00000013399	CNOT1	100	99.613	ENSMFAG00000035888	CNOT1	100	99.613	Macaca_fascicularis
ENSFDAG00000013399	CNOT1	100	99.579	ENSMMUG00000014625	CNOT1	100	99.579	Macaca_mulatta
ENSFDAG00000013399	CNOT1	100	97.034	ENSMNEG00000031820	CNOT1	100	99.626	Macaca_nemestrina
ENSFDAG00000013399	CNOT1	100	98.409	ENSMLEG00000040933	CNOT1	100	98.409	Mandrillus_leucophaeus
ENSFDAG00000013399	CNOT1	100	89.215	ENSMAMG00000016524	cnot1	100	89.295	Mastacembelus_armatus
ENSFDAG00000013399	CNOT1	97	97.195	ENSMZEG00005016210	cnot1	100	97.195	Maylandia_zebra
ENSFDAG00000013399	CNOT1	100	97.433	ENSMGAG00000001908	CNOT1	100	97.433	Meleagris_gallopavo
ENSFDAG00000013399	CNOT1	100	99.495	ENSMICG00000007071	CNOT1	100	99.495	Microcebus_murinus
ENSFDAG00000013399	CNOT1	100	99.453	ENSMOCG00000017969	Cnot1	100	99.453	Microtus_ochrogaster
ENSFDAG00000013399	CNOT1	97	93.829	ENSMMOG00000019134	cnot1	100	93.829	Mola_mola
ENSFDAG00000013399	CNOT1	100	97.897	ENSMODG00000014199	CNOT1	100	97.897	Monodelphis_domestica
ENSFDAG00000013399	CNOT1	100	90.214	ENSMALG00000008645	cnot1	100	90.256	Monopterus_albus
ENSFDAG00000013399	CNOT1	95	99.777	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	Mus_caroli
ENSFDAG00000013399	CNOT1	100	99.495	ENSMUSG00000036550	Cnot1	100	99.495	Mus_musculus
ENSFDAG00000013399	CNOT1	100	99.537	MGP_PahariEiJ_G0023028	Cnot1	100	99.537	Mus_pahari
ENSFDAG00000013399	CNOT1	100	99.495	MGP_SPRETEiJ_G0032549	Cnot1	100	99.495	Mus_spretus
ENSFDAG00000013399	CNOT1	100	99.705	ENSMPUG00000004830	CNOT1	100	99.705	Mustela_putorius_furo
ENSFDAG00000013399	CNOT1	100	99.032	ENSMLUG00000003728	CNOT1	100	99.032	Myotis_lucifugus
ENSFDAG00000013399	CNOT1	100	99.705	ENSNGAG00000018628	Cnot1	100	99.705	Nannospalax_galili
ENSFDAG00000013399	CNOT1	94	97.195	ENSNBRG00000019358	cnot1	100	97.195	Neolamprologus_brichardi
ENSFDAG00000013399	CNOT1	100	99.527	ENSNLEG00000003566	CNOT1	100	99.527	Nomascus_leucogenys
ENSFDAG00000013399	CNOT1	86	98.210	ENSMEUG00000006145	CNOT1	87	98.210	Notamacropus_eugenii
ENSFDAG00000013399	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSFDAG00000013399	CNOT1	100	99.874	ENSODEG00000016337	CNOT1	100	99.874	Octodon_degus
ENSFDAG00000013399	CNOT1	100	90.578	ENSONIG00000007358	cnot1	100	90.171	Oreochromis_niloticus
ENSFDAG00000013399	CNOT1	92	98.136	ENSOANG00000012109	CNOT1	100	98.166	Ornithorhynchus_anatinus
ENSFDAG00000013399	CNOT1	100	99.621	ENSOCUG00000006911	CNOT1	100	99.621	Oryctolagus_cuniculus
ENSFDAG00000013399	CNOT1	100	90.314	ENSORLG00000013734	cnot1	100	90.352	Oryzias_latipes
ENSFDAG00000013399	CNOT1	100	90.776	ENSORLG00020017012	cnot1	100	90.446	Oryzias_latipes_hni
ENSFDAG00000013399	CNOT1	100	90.691	ENSORLG00015007091	cnot1	100	90.189	Oryzias_latipes_hsok
ENSFDAG00000013399	CNOT1	100	90.013	ENSOMEG00000015124	cnot1	100	90.309	Oryzias_melastigma
ENSFDAG00000013399	CNOT1	100	99.537	ENSOGAG00000000543	CNOT1	100	99.537	Otolemur_garnettii
ENSFDAG00000013399	CNOT1	100	99.747	ENSOARG00000001567	CNOT1	100	99.747	Ovis_aries
ENSFDAG00000013399	CNOT1	100	99.579	ENSPPAG00000022013	CNOT1	100	99.579	Pan_paniscus
ENSFDAG00000013399	CNOT1	100	99.705	ENSPPRG00000004867	CNOT1	100	99.705	Panthera_pardus
ENSFDAG00000013399	CNOT1	100	99.705	ENSPTIG00000012589	CNOT1	100	99.705	Panthera_tigris_altaica
ENSFDAG00000013399	CNOT1	100	99.570	ENSPTRG00000008183	CNOT1	100	99.570	Pan_troglodytes
ENSFDAG00000013399	CNOT1	100	96.144	ENSPANG00000020901	CNOT1	100	96.144	Papio_anubis
ENSFDAG00000013399	CNOT1	100	92.195	ENSPKIG00000023538	CNOT1	100	92.363	Paramormyrops_kingsleyae
ENSFDAG00000013399	CNOT1	97	93.399	ENSPKIG00000002914	CNOT1	99	93.399	Paramormyrops_kingsleyae
ENSFDAG00000013399	CNOT1	100	97.685	ENSPSIG00000005499	CNOT1	100	97.685	Pelodiscus_sinensis
ENSFDAG00000013399	CNOT1	100	81.250	ENSPMAG00000009381	cnot1	100	81.150	Petromyzon_marinus
ENSFDAG00000013399	CNOT1	100	97.809	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
ENSFDAG00000013399	CNOT1	99	89.858	ENSPFOG00000003497	cnot1	100	89.852	Poecilia_formosa
ENSFDAG00000013399	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSFDAG00000013399	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSFDAG00000013399	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSFDAG00000013399	CNOT1	100	99.537	ENSPPYG00000007410	CNOT1	100	99.537	Pongo_abelii
ENSFDAG00000013399	CNOT1	90	97.359	ENSPCAG00000003241	CNOT1	90	97.359	Procavia_capensis
ENSFDAG00000013399	CNOT1	100	99.527	ENSPCOG00000027139	CNOT1	100	99.527	Propithecus_coquereli
ENSFDAG00000013399	CNOT1	100	97.054	ENSPVAG00000004243	CNOT1	100	97.054	Pteropus_vampyrus
ENSFDAG00000013399	CNOT1	97	97.195	ENSPNYG00000012919	cnot1	100	97.195	Pundamilia_nyererei
ENSFDAG00000013399	CNOT1	100	89.861	ENSPNAG00000000246	cnot1	100	90.282	Pygocentrus_nattereri
ENSFDAG00000013399	CNOT1	100	99.495	ENSRNOG00000012271	Cnot1	100	99.495	Rattus_norvegicus
ENSFDAG00000013399	CNOT1	100	97.506	ENSRBIG00000044598	CNOT1	100	97.506	Rhinopithecus_bieti
ENSFDAG00000013399	CNOT1	100	99.621	ENSRROG00000000906	CNOT1	100	99.621	Rhinopithecus_roxellana
ENSFDAG00000013399	CNOT1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSFDAG00000013399	CNOT1	100	95.326	ENSSBOG00000029155	CNOT1	100	95.326	Saimiri_boliviensis_boliviensis
ENSFDAG00000013399	CNOT1	100	97.981	ENSSHAG00000012187	CNOT1	100	97.981	Sarcophilus_harrisii
ENSFDAG00000013399	CNOT1	100	92.505	ENSSFOG00015017614	cnot1	100	92.245	Scleropages_formosus
ENSFDAG00000013399	CNOT1	97	97.195	ENSSMAG00000013844	cnot1	100	97.195	Scophthalmus_maximus
ENSFDAG00000013399	CNOT1	97	97.055	ENSSDUG00000021491	cnot1	100	97.055	Seriola_dumerili
ENSFDAG00000013399	CNOT1	97	97.055	ENSSLDG00000014816	cnot1	100	97.055	Seriola_lalandi_dorsalis
ENSFDAG00000013399	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSFDAG00000013399	CNOT1	100	90.600	ENSSPAG00000018802	cnot1	100	90.390	Stegastes_partitus
ENSFDAG00000013399	CNOT1	100	99.537	ENSSSCG00000002799	CNOT1	100	99.537	Sus_scrofa
ENSFDAG00000013399	CNOT1	100	97.562	ENSTGUG00000005919	CNOT1	100	97.562	Taeniopygia_guttata
ENSFDAG00000013399	CNOT1	100	88.945	ENSTNIG00000018706	cnot1	100	88.792	Tetraodon_nigroviridis
ENSFDAG00000013399	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSFDAG00000013399	CNOT1	95	99.417	ENSTTRG00000008460	CNOT1	95	99.417	Tursiops_truncatus
ENSFDAG00000013399	CNOT1	100	99.705	ENSUAMG00000009251	CNOT1	100	99.705	Ursus_americanus
ENSFDAG00000013399	CNOT1	100	99.705	ENSUMAG00000021291	CNOT1	100	99.705	Ursus_maritimus
ENSFDAG00000013399	CNOT1	97	97.172	ENSVPAG00000008846	CNOT1	97	97.172	Vicugna_pacos
ENSFDAG00000013399	CNOT1	100	98.574	ENSVVUG00000024037	CNOT1	100	99.259	Vulpes_vulpes
ENSFDAG00000013399	CNOT1	100	90.302	ENSXETG00000015900	cnot1	100	90.092	Xenopus_tropicalis
ENSFDAG00000013399	CNOT1	100	89.379	ENSXCOG00000013552	cnot1	100	89.337	Xiphophorus_couchianus
ENSFDAG00000013399	CNOT1	100	89.421	ENSXMAG00000006031	cnot1	100	89.379	Xiphophorus_maculatus