EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000013791 (Gene tree)
Gene ID: 104867137
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 154872 bases
Position: chrKN122459.1:1951099-2105970
Accession: 104867137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000004584	ResIII	PF04851.15	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000018104	CHD6-201	648	-	ENSFDAP00000004591	215 (aa)	-	-
ENSFDAT00000018110	CHD6-202	8139	XM_010631411	ENSFDAP00000004584	2712 (aa)	XP_010629713	-

Gene Model

Click here to download ENSFDAG00000013791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000013791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000013791	CHD6	75	65.308	ENSFDAG00000021037	CHD9	73	63.855
ENSFDAG00000013791	CHD6	61	61.278	ENSFDAG00000011368	CHD8	60	62.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000013791	CHD6	99	91.704	ENSG00000124177	CHD6	99	98.837	Homo_sapiens
ENSFDAG00000013791	CHD6	75	75.148	ENSAPOG00000013736	chd6	64	75.380	Acanthochromis_polyacanthus
ENSFDAG00000013791	CHD6	99	90.406	ENSAMEG00000009496	CHD6	99	90.406	Ailuropoda_melanoleuca
ENSFDAG00000013791	CHD6	74	75.531	ENSATEG00000005608	chd6	64	75.663	Anabas_testudineus
ENSFDAG00000013791	CHD6	68	78.801	ENSAPLG00000015592	CHD6	99	72.790	Anas_platyrhynchos
ENSFDAG00000013791	CHD6	90	75.531	ENSACAG00000006842	CHD6	89	76.592	Anolis_carolinensis
ENSFDAG00000013791	CHD6	99	91.550	ENSANAG00000037548	CHD6	99	92.661	Aotus_nancymaae
ENSFDAG00000013791	CHD6	77	73.913	ENSAMXG00000009576	chd6	74	73.077	Astyanax_mexicanus
ENSFDAG00000013791	CHD6	99	87.357	ENSBTAG00000005733	CHD6	99	87.357	Bos_taurus
ENSFDAG00000013791	CHD6	99	91.519	ENSCJAG00000017920	CHD6	99	92.477	Callithrix_jacchus
ENSFDAG00000013791	CHD6	99	90.325	ENSCAFG00000009236	CHD6	99	90.251	Canis_familiaris
ENSFDAG00000013791	CHD6	99	89.808	ENSCAFG00020012906	CHD6	99	96.540	Canis_lupus_dingo
ENSFDAG00000013791	CHD6	99	87.136	ENSCHIG00000017606	CHD6	99	87.136	Capra_hircus
ENSFDAG00000013791	CHD6	84	90.710	ENSTSYG00000014635	CHD6	100	90.710	Carlito_syrichta
ENSFDAG00000013791	CHD6	99	95.054	ENSCPOG00000015641	CHD6	99	95.054	Cavia_porcellus
ENSFDAG00000013791	CHD6	99	91.593	ENSCCAG00000036828	CHD6	99	92.661	Cebus_capucinus
ENSFDAG00000013791	CHD6	99	91.298	ENSCATG00000039248	CHD6	99	92.661	Cercocebus_atys
ENSFDAG00000013791	CHD6	99	94.880	ENSCLAG00000013743	CHD6	99	94.880	Chinchilla_lanigera
ENSFDAG00000013791	CHD6	99	91.556	ENSCSAG00000013997	CHD6	99	91.556	Chlorocebus_sabaeus
ENSFDAG00000013791	CHD6	91	88.867	ENSCHOG00000012647	CHD6	95	88.867	Choloepus_hoffmanni
ENSFDAG00000013791	CHD6	99	73.385	ENSCPBG00000019382	CHD6	99	73.804	Chrysemys_picta_bellii
ENSFDAG00000013791	CHD6	99	91.661	ENSCANG00000043435	CHD6	99	92.661	Colobus_angolensis_palliatus
ENSFDAG00000013791	CHD6	99	89.926	ENSCGRG00001002694	Chd6	99	89.926	Cricetulus_griseus_chok1gshd
ENSFDAG00000013791	CHD6	82	73.567	ENSDARG00000017244	chd6	79	73.458	Danio_rerio
ENSFDAG00000013791	CHD6	99	89.130	ENSDNOG00000004176	CHD6	99	89.130	Dasypus_novemcinctus
ENSFDAG00000013791	CHD6	99	90.624	ENSEASG00005023433	CHD6	95	96.911	Equus_asinus_asinus
ENSFDAG00000013791	CHD6	99	91.181	ENSECAG00000011761	CHD6	99	91.181	Equus_caballus
ENSFDAG00000013791	CHD6	70	79.817	ENSELUG00000012309	chd6	89	79.817	Esox_lucius
ENSFDAG00000013791	CHD6	99	90.406	ENSFCAG00000003572	CHD6	99	90.406	Felis_catus
ENSFDAG00000013791	CHD6	99	71.262	ENSFALG00000012563	CHD6	98	71.481	Ficedula_albicollis
ENSFDAG00000013791	CHD6	73	69.407	ENSGMOG00000011715	chd6	84	69.550	Gadus_morhua
ENSFDAG00000013791	CHD6	79	71.082	ENSGACG00000000037	chd6	87	69.695	Gasterosteus_aculeatus
ENSFDAG00000013791	CHD6	99	91.630	ENSGGOG00000013123	CHD6	99	92.661	Gorilla_gorilla
ENSFDAG00000013791	CHD6	77	72.913	ENSHBUG00000014701	chd6	64	73.961	Haplochromis_burtoni
ENSFDAG00000013791	CHD6	99	96.199	ENSHGLG00000004548	CHD6	99	96.199	Heterocephalus_glaber_female
ENSFDAG00000013791	CHD6	99	96.199	ENSHGLG00100006401	CHD6	99	96.199	Heterocephalus_glaber_male
ENSFDAG00000013791	CHD6	78	75.591	ENSIPUG00000003692	chd6	74	76.326	Ictalurus_punctatus
ENSFDAG00000013791	CHD6	99	92.804	ENSSTOG00000013382	CHD6	99	92.804	Ictidomys_tridecemlineatus
ENSFDAG00000013791	CHD6	85	77.171	ENSLACG00000010881	CHD6	83	77.036	Latimeria_chalumnae
ENSFDAG00000013791	CHD6	72	80.380	ENSLOCG00000007386	chd6	84	75.608	Lepisosteus_oculatus
ENSFDAG00000013791	CHD6	99	90.557	ENSLAFG00000012144	CHD6	99	90.557	Loxodonta_africana
ENSFDAG00000013791	CHD6	99	91.661	ENSMFAG00000032830	CHD6	99	92.661	Macaca_fascicularis
ENSFDAG00000013791	CHD6	99	91.630	ENSMMUG00000020458	CHD6	99	92.661	Macaca_mulatta
ENSFDAG00000013791	CHD6	99	91.661	ENSMNEG00000040847	CHD6	99	92.661	Macaca_nemestrina
ENSFDAG00000013791	CHD6	99	91.661	ENSMLEG00000031965	CHD6	99	92.661	Mandrillus_leucophaeus
ENSFDAG00000013791	CHD6	76	73.550	ENSMAMG00000013111	chd6	64	74.739	Mastacembelus_armatus
ENSFDAG00000013791	CHD6	99	71.838	ENSMGAG00000001121	CHD6	99	72.463	Meleagris_gallopavo
ENSFDAG00000013791	CHD6	99	91.802	ENSMICG00000016641	CHD6	99	92.294	Microcebus_murinus
ENSFDAG00000013791	CHD6	89	80.339	ENSMODG00000000720	-	99	80.339	Monodelphis_domestica
ENSFDAG00000013791	CHD6	99	88.524	MGP_CAROLIEiJ_G0024604	Chd6	99	94.473	Mus_caroli
ENSFDAG00000013791	CHD6	99	88.672	ENSMUSG00000057133	Chd6	99	94.388	Mus_musculus
ENSFDAG00000013791	CHD6	99	88.635	MGP_PahariEiJ_G0026048	Chd6	99	94.813	Mus_pahari
ENSFDAG00000013791	CHD6	99	88.672	MGP_SPRETEiJ_G0025526	Chd6	99	94.473	Mus_spretus
ENSFDAG00000013791	CHD6	99	89.142	ENSMPUG00000017695	CHD6	99	89.179	Mustela_putorius_furo
ENSFDAG00000013791	CHD6	99	89.705	ENSMLUG00000016247	CHD6	99	89.705	Myotis_lucifugus
ENSFDAG00000013791	CHD6	78	72.864	ENSNBRG00000013839	chd6	79	71.861	Neolamprologus_brichardi
ENSFDAG00000013791	CHD6	99	90.540	ENSNLEG00000006496	CHD6	99	90.480	Nomascus_leucogenys
ENSFDAG00000013791	CHD6	99	87.196	ENSOPRG00000013376	-	99	87.196	Ochotona_princeps
ENSFDAG00000013791	CHD6	82	75.517	ENSONIG00000000393	chd6	83	74.903	Oreochromis_niloticus
ENSFDAG00000013791	CHD6	99	69.887	ENSOANG00000014347	CHD6	99	69.902	Ornithorhynchus_anatinus
ENSFDAG00000013791	CHD6	99	89.041	ENSOCUG00000012394	CHD6	99	89.041	Oryctolagus_cuniculus
ENSFDAG00000013791	CHD6	79	70.877	ENSORLG00020021891	chd6	95	85.972	Oryzias_latipes_hni
ENSFDAG00000013791	CHD6	99	90.122	ENSOGAG00000002427	CHD6	99	90.074	Otolemur_garnettii
ENSFDAG00000013791	CHD6	99	85.035	ENSOARG00000002597	CHD6	99	85.035	Ovis_aries
ENSFDAG00000013791	CHD6	99	90.627	ENSPPRG00000014756	CHD6	99	90.627	Panthera_pardus
ENSFDAG00000013791	CHD6	99	90.443	ENSPTIG00000011094	CHD6	99	90.443	Panthera_tigris_altaica
ENSFDAG00000013791	CHD6	99	91.808	ENSPTRG00000013504	CHD6	99	92.661	Pan_troglodytes
ENSFDAG00000013791	CHD6	99	91.667	ENSPANG00000025554	CHD6	99	92.844	Papio_anubis
ENSFDAG00000013791	CHD6	77	76.774	ENSPKIG00000005578	chd6	79	72.639	Paramormyrops_kingsleyae
ENSFDAG00000013791	CHD6	77	76.491	ENSPMGG00000014877	chd6	90	75.378	Periophthalmus_magnuspinnatus
ENSFDAG00000013791	CHD6	99	79.624	ENSPCIG00000028037	CHD6	99	80.140	Phascolarctos_cinereus
ENSFDAG00000013791	CHD6	78	70.158	ENSPLAG00000003128	chd6	70	72.803	Poecilia_latipinna
ENSFDAG00000013791	CHD6	73	72.692	ENSPREG00000022653	chd6	99	86.264	Poecilia_reticulata
ENSFDAG00000013791	CHD6	99	91.928	ENSPPYG00000011016	CHD6	99	91.928	Pongo_abelii
ENSFDAG00000013791	CHD6	99	91.614	ENSPCOG00000001089	CHD6	99	92.477	Propithecus_coquereli
ENSFDAG00000013791	CHD6	78	74.658	ENSPNYG00000022516	chd6	78	73.913	Pundamilia_nyererei
ENSFDAG00000013791	CHD6	76	75.182	ENSPNAG00000012825	chd6	74	74.323	Pygocentrus_nattereri
ENSFDAG00000013791	CHD6	99	88.479	ENSRNOG00000016744	Chd6	99	88.294	Rattus_norvegicus
ENSFDAG00000013791	CHD6	99	91.587	ENSSBOG00000022089	CHD6	99	92.661	Saimiri_boliviensis_boliviensis
ENSFDAG00000013791	CHD6	99	79.176	ENSSHAG00000017072	CHD6	99	79.691	Sarcophilus_harrisii
ENSFDAG00000013791	CHD6	78	76.057	ENSSFOG00015012920	chd6	80	71.867	Scleropages_formosus
ENSFDAG00000013791	CHD6	58	99.342	ENSSARG00000002615	-	60	99.342	Sorex_araneus
ENSFDAG00000013791	CHD6	99	89.377	ENSSSCG00000007360	CHD6	99	89.377	Sus_scrofa
ENSFDAG00000013791	CHD6	97	73.399	ENSTGUG00000003179	CHD6	99	73.810	Taeniopygia_guttata
ENSFDAG00000013791	CHD6	76	77.231	ENSTNIG00000017487	chd6	87	77.231	Tetraodon_nigroviridis
ENSFDAG00000013791	CHD6	99	86.915	ENSTTRG00000013438	CHD6	99	86.915	Tursiops_truncatus
ENSFDAG00000013791	CHD6	99	89.254	ENSUAMG00000024036	CHD6	95	95.367	Ursus_americanus
ENSFDAG00000013791	CHD6	99	90.654	ENSUMAG00000002017	CHD6	95	95.367	Ursus_maritimus
ENSFDAG00000013791	CHD6	94	88.499	ENSVPAG00000007941	CHD6	95	88.567	Vicugna_pacos
ENSFDAG00000013791	CHD6	99	90.332	ENSVVUG00000029164	CHD6	99	90.332	Vulpes_vulpes
ENSFDAG00000013791	CHD6	99	60.847	ENSXETG00000021445	chd6	62	72.070	Xenopus_tropicalis