EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000013830 (Gene tree)
Gene ID: 104873942
Gene Symbol: SNRNP70
Alias: RNPU1Z|RPU1|SNRP70|Snp1|U1-70K
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 15449 bases
Position: chrKN123228.1:1243782-1259230
Accession: 104873942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000004652	RRM_1	PF00076.22	3.5e-18	1	1
ENSFDAP00000004648	RRM_1	PF00076.22	9.4e-09	1	1
ENSFDAP00000004643	RRM_1	PF00076.22	9.6e-09	1	1
ENSFDAP00000004652	U1snRNP70_N	PF12220.8	6.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000018162	SNRNP70-201	255	-	ENSFDAP00000004643	85 (aa)	-	-
ENSFDAT00000018167	SNRNP70-202	258	-	ENSFDAP00000004648	86 (aa)	-	-
ENSFDAT00000018171	SNRNP70-203	1113	XM_010640889	ENSFDAP00000004652	370 (aa)	XP_010639191	-

Gene Model

Click here to download ENSFDAG00000013830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000013830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000013830	SNRNP70	96	99.682	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSFDAG00000013830	SNRNP70	95	86.585	ENSAMEG00000014468	SNRNP70	81	96.203	Ailuropoda_melanoleuca
ENSFDAG00000013830	SNRNP70	95	90.244	ENSAOCG00000011672	snrnp70	50	83.482	Amphiprion_ocellaris
ENSFDAG00000013830	SNRNP70	95	93.827	ENSACAG00000013276	SNRNP70	51	97.297	Anolis_carolinensis
ENSFDAG00000013830	SNRNP70	95	97.531	ENSANAG00000036787	SNRNP70	99	97.561	Aotus_nancymaae
ENSFDAG00000013830	SNRNP70	96	99.682	ENSCJAG00000000193	SNRNP70	99	98.814	Callithrix_jacchus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSCAFG00000003711	SNRNP70	99	97.561	Canis_familiaris
ENSFDAG00000013830	SNRNP70	95	97.531	ENSCAFG00020025470	SNRNP70	99	93.373	Canis_lupus_dingo
ENSFDAG00000013830	SNRNP70	100	98.824	ENSCAPG00000017198	-	100	98.824	Cavia_aperea
ENSFDAG00000013830	SNRNP70	95	97.531	ENSCPOG00000019589	SNRNP70	61	100.000	Cavia_porcellus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSCCAG00000036551	SNRNP70	78	99.623	Cebus_capucinus
ENSFDAG00000013830	SNRNP70	96	99.682	ENSCATG00000016149	SNRNP70	81	99.682	Cercocebus_atys
ENSFDAG00000013830	SNRNP70	95	97.531	ENSCLAG00000007991	SNRNP70	81	100.000	Chinchilla_lanigera
ENSFDAG00000013830	SNRNP70	96	96.815	ENSCSAG00000002759	SNRNP70	80	96.815	Chlorocebus_sabaeus
ENSFDAG00000013830	SNRNP70	95	96.296	ENSCPBG00000014841	SNRNP70	51	99.099	Chrysemys_picta_bellii
ENSFDAG00000013830	SNRNP70	87	77.027	ENSCSAVG00000010109	-	50	70.681	Ciona_savignyi
ENSFDAG00000013830	SNRNP70	100	99.682	ENSCANG00000036607	SNRNP70	99	99.187	Colobus_angolensis_palliatus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSCGRG00001020676	Snrnp70	60	100.000	Cricetulus_griseus_chok1gshd
ENSFDAG00000013830	SNRNP70	95	97.531	ENSCGRG00000018048	Snrnp70	60	100.000	Cricetulus_griseus_crigri
ENSFDAG00000013830	SNRNP70	95	88.889	ENSCSEG00000011978	snrnp70	99	91.480	Cynoglossus_semilaevis
ENSFDAG00000013830	SNRNP70	95	90.123	ENSDARG00000077126	snrnp70	99	88.820	Danio_rerio
ENSFDAG00000013830	SNRNP70	95	97.531	ENSDORG00000010228	Snrnp70	61	100.000	Dipodomys_ordii
ENSFDAG00000013830	SNRNP70	72	100.000	ENSETEG00000005009	SNRNP70	57	100.000	Echinops_telfairi
ENSFDAG00000013830	SNRNP70	100	99.684	ENSEASG00005004917	SNRNP70	81	99.684	Equus_asinus_asinus
ENSFDAG00000013830	SNRNP70	95	83.951	ENSEEUG00000005666	SNRNP70	62	82.051	Erinaceus_europaeus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSFCAG00000042603	SNRNP70	100	77.854	Felis_catus
ENSFDAG00000013830	SNRNP70	95	88.889	ENSGMOG00000011492	snrnp70	97	91.403	Gadus_morhua
ENSFDAG00000013830	SNRNP70	95	88.889	ENSGACG00000000448	snrnp70	70	91.928	Gasterosteus_aculeatus
ENSFDAG00000013830	SNRNP70	96	99.682	ENSGGOG00000008245	SNRNP70	99	97.561	Gorilla_gorilla
ENSFDAG00000013830	SNRNP70	100	97.647	ENSSTOG00000013988	-	99	98.810	Ictidomys_tridecemlineatus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSJJAG00000002614	Snrnp70	61	100.000	Jaculus_jaculus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSLAFG00000028536	SNRNP70	100	100.000	Loxodonta_africana
ENSFDAG00000013830	SNRNP70	96	99.682	ENSMFAG00000039824	SNRNP70	81	99.682	Macaca_fascicularis
ENSFDAG00000013830	SNRNP70	96	96.815	ENSMMUG00000004928	SNRNP70	99	97.561	Macaca_mulatta
ENSFDAG00000013830	SNRNP70	95	97.531	ENSMNEG00000038057	SNRNP70	80	96.178	Macaca_nemestrina
ENSFDAG00000013830	SNRNP70	96	99.682	ENSMLEG00000030967	SNRNP70	81	99.682	Mandrillus_leucophaeus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSMAUG00000020970	Snrnp70	61	100.000	Mesocricetus_auratus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSMICG00000038437	SNRNP70	100	99.190	Microcebus_murinus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSMOCG00000012825	Snrnp70	60	100.000	Microtus_ochrogaster
ENSFDAG00000013830	SNRNP70	95	83.951	ENSMODG00000023381	SNRNP70	68	88.060	Monodelphis_domestica
ENSFDAG00000013830	SNRNP70	95	98.780	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSFDAG00000013830	SNRNP70	98	100.000	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSFDAG00000013830	SNRNP70	95	98.780	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSFDAG00000013830	SNRNP70	98	100.000	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSFDAG00000013830	SNRNP70	100	99.367	ENSMPUG00000003258	SNRNP70	81	99.367	Mustela_putorius_furo
ENSFDAG00000013830	SNRNP70	100	99.684	ENSMLUG00000011766	SNRNP70	91	99.684	Myotis_lucifugus
ENSFDAG00000013830	SNRNP70	100	98.824	ENSNGAG00000021191	Snrnp70	100	98.824	Nannospalax_galili
ENSFDAG00000013830	SNRNP70	95	91.358	ENSNBRG00000003126	snrnp70	96	92.377	Neolamprologus_brichardi
ENSFDAG00000013830	SNRNP70	94	99.675	ENSNLEG00000004899	SNRNP70	98	98.770	Nomascus_leucogenys
ENSFDAG00000013830	SNRNP70	95	96.296	ENSMEUG00000015650	SNRNP70	53	98.507	Notamacropus_eugenii
ENSFDAG00000013830	SNRNP70	95	97.531	ENSODEG00000017499	SNRNP70	58	100.000	Octodon_degus
ENSFDAG00000013830	SNRNP70	95	90.123	ENSONIG00000007822	snrnp70	52	91.928	Oreochromis_niloticus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSOANG00000005213	SNRNP70	97	99.550	Ornithorhynchus_anatinus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSOCUG00000015081	SNRNP70	76	94.633	Oryctolagus_cuniculus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSOGAG00000029310	SNRNP70	61	97.835	Otolemur_garnettii
ENSFDAG00000013830	SNRNP70	95	97.531	ENSOARG00000012608	SNRNP70	60	100.000	Ovis_aries
ENSFDAG00000013830	SNRNP70	96	99.682	ENSPPAG00000035067	SNRNP70	99	100.000	Pan_paniscus
ENSFDAG00000013830	SNRNP70	100	99.367	ENSPPRG00000005579	SNRNP70	81	99.367	Panthera_pardus
ENSFDAG00000013830	SNRNP70	96	99.682	ENSPTRG00000011277	SNRNP70	100	99.602	Pan_troglodytes
ENSFDAG00000013830	SNRNP70	96	99.682	ENSPANG00000004068	SNRNP70	81	99.682	Papio_anubis
ENSFDAG00000013830	SNRNP70	95	65.060	ENSPSIG00000015251	SNRNP70	90	85.217	Pelodiscus_sinensis
ENSFDAG00000013830	SNRNP70	95	97.531	ENSPEMG00000019011	Snrnp70	60	100.000	Peromyscus_maniculatus_bairdii
ENSFDAG00000013830	SNRNP70	73	90.323	ENSPMAG00000008502	snrnp70	97	83.422	Petromyzon_marinus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSPCIG00000007296	SNRNP70	82	94.904	Phascolarctos_cinereus
ENSFDAG00000013830	SNRNP70	96	99.045	ENSPPYG00000010234	SNRNP70	81	99.045	Pongo_abelii
ENSFDAG00000013830	SNRNP70	95	97.531	ENSPCOG00000023103	SNRNP70	82	91.739	Propithecus_coquereli
ENSFDAG00000013830	SNRNP70	95	97.531	ENSPVAG00000009578	SNRNP70	61	93.913	Pteropus_vampyrus
ENSFDAG00000013830	SNRNP70	96	99.682	ENSRBIG00000042387	SNRNP70	93	100.000	Rhinopithecus_bieti
ENSFDAG00000013830	SNRNP70	96	99.682	ENSRROG00000033636	SNRNP70	93	100.000	Rhinopithecus_roxellana
ENSFDAG00000013830	SNRNP70	96	99.682	ENSSBOG00000020026	SNRNP70	99	97.561	Saimiri_boliviensis_boliviensis
ENSFDAG00000013830	SNRNP70	100	94.904	ENSSHAG00000002194	SNRNP70	82	94.904	Sarcophilus_harrisii
ENSFDAG00000013830	SNRNP70	95	95.062	ENSSPUG00000016621	SNRNP70	52	98.649	Sphenodon_punctatus
ENSFDAG00000013830	SNRNP70	96	99.367	ENSTTRG00000017099	SNRNP70	81	99.367	Tursiops_truncatus
ENSFDAG00000013830	SNRNP70	100	99.367	ENSUAMG00000016147	SNRNP70	81	99.367	Ursus_americanus
ENSFDAG00000013830	SNRNP70	95	97.531	ENSUMAG00000001467	SNRNP70	99	97.561	Ursus_maritimus
ENSFDAG00000013830	SNRNP70	62	94.340	ENSVPAG00000005959	-	100	80.995	Vicugna_pacos
ENSFDAG00000013830	SNRNP70	100	99.367	ENSVVUG00000022976	SNRNP70	99	97.561	Vulpes_vulpes
ENSFDAG00000013830	SNRNP70	95	96.296	ENSXETG00000022919	snrnp70	57	95.595	Xenopus_tropicalis
ENSFDAG00000013830	SNRNP70	95	91.358	ENSXMAG00000012789	snrnp70	62	77.700	Xiphophorus_maculatus