EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000014026 (Gene tree)
Gene ID: 104874759
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 27779 bases
Position: chrKN123341.1:1367638-1395416
Accession: 104874759
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000004884	PRP4	PF08799.11	7.2e-14	1	1
ENSFDAP00000004884	Prp18	PF02840.15	4e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000018399	-	963	XM_010641979	ENSFDAP00000004884	320 (aa)	XP_010640281	-

Gene Model

Click here to download ENSFDAG00000014026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000014026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000014026	-	96	67.308	ENSFDAG00000010713	-	88	67.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000014026	-	100	99.375	ENSG00000165630	PRPF18	96	99.375	Homo_sapiens
ENSFDAG00000014026	-	100	87.500	ENSAPOG00000024177	prpf18	94	87.500	Acanthochromis_polyacanthus
ENSFDAG00000014026	-	100	99.062	ENSAMEG00000013591	-	94	99.062	Ailuropoda_melanoleuca
ENSFDAG00000014026	-	100	85.938	ENSACIG00000001186	prpf18	94	85.938	Amphilophus_citrinellus
ENSFDAG00000014026	-	98	87.540	ENSAOCG00000006572	prpf18	88	84.688	Amphiprion_ocellaris
ENSFDAG00000014026	-	100	87.812	ENSAPEG00000004564	prpf18	94	87.812	Amphiprion_percula
ENSFDAG00000014026	-	100	86.250	ENSATEG00000000303	prpf18	94	86.250	Anabas_testudineus
ENSFDAG00000014026	-	99	94.671	ENSAPLG00000003387	-	93	94.671	Anas_platyrhynchos
ENSFDAG00000014026	-	100	94.410	ENSACAG00000000818	-	94	94.410	Anolis_carolinensis
ENSFDAG00000014026	-	100	98.750	ENSANAG00000037445	-	94	98.750	Aotus_nancymaae
ENSFDAG00000014026	-	100	86.562	ENSACLG00000026296	prpf18	94	86.562	Astatotilapia_calliptera
ENSFDAG00000014026	-	99	86.239	ENSAMXG00000012848	prpf18	93	86.239	Astyanax_mexicanus
ENSFDAG00000014026	-	100	98.750	ENSBTAG00000017244	PRPF18	94	98.750	Bos_taurus
ENSFDAG00000014026	-	99	39.024	WBGene00009320	F32B6.3	91	39.024	Caenorhabditis_elegans
ENSFDAG00000014026	-	100	98.750	ENSCJAG00000009432	-	94	98.750	Callithrix_jacchus
ENSFDAG00000014026	-	100	99.062	ENSCAFG00000004735	-	94	99.062	Canis_familiaris
ENSFDAG00000014026	-	100	99.062	ENSCAFG00020007712	-	94	99.062	Canis_lupus_dingo
ENSFDAG00000014026	-	100	98.750	ENSCHIG00000000499	-	94	98.750	Capra_hircus
ENSFDAG00000014026	-	100	98.438	ENSTSYG00000003517	-	94	98.438	Carlito_syrichta
ENSFDAG00000014026	-	100	99.375	ENSCPOG00000021069	-	94	99.375	Cavia_porcellus
ENSFDAG00000014026	-	100	98.750	ENSCCAG00000036822	-	94	98.750	Cebus_capucinus
ENSFDAG00000014026	-	100	87.500	ENSCATG00000016633	-	93	87.500	Cercocebus_atys
ENSFDAG00000014026	-	100	98.750	ENSCLAG00000011770	-	94	98.750	Chinchilla_lanigera
ENSFDAG00000014026	-	100	96.657	ENSCSAG00000013109	-	94	96.657	Chlorocebus_sabaeus
ENSFDAG00000014026	-	99	91.291	ENSCPBG00000003100	-	94	91.892	Chrysemys_picta_bellii
ENSFDAG00000014026	-	99	55.346	ENSCING00000020481	-	91	55.346	Ciona_intestinalis
ENSFDAG00000014026	-	99	55.556	ENSCSAVG00000010546	-	92	55.590	Ciona_savignyi
ENSFDAG00000014026	-	100	99.062	ENSCANG00000034900	-	94	99.062	Colobus_angolensis_palliatus
ENSFDAG00000014026	-	100	98.750	ENSCGRG00001023665	Prpf18	94	98.750	Cricetulus_griseus_chok1gshd
ENSFDAG00000014026	-	100	98.750	ENSCGRG00000014690	Prpf18	94	98.750	Cricetulus_griseus_crigri
ENSFDAG00000014026	-	100	85.000	ENSCSEG00000005536	prpf18	93	85.000	Cynoglossus_semilaevis
ENSFDAG00000014026	-	100	86.250	ENSCVAG00000012401	prpf18	94	86.250	Cyprinodon_variegatus
ENSFDAG00000014026	-	100	86.875	ENSDARG00000058306	prpf18	94	86.875	Danio_rerio
ENSFDAG00000014026	-	100	99.062	ENSDNOG00000035607	-	94	99.062	Dasypus_novemcinctus
ENSFDAG00000014026	-	100	98.750	ENSDORG00000000858	Prpf18	94	98.750	Dipodomys_ordii
ENSFDAG00000014026	-	99	50.789	FBgn0027784	Prp18	91	50.473	Drosophila_melanogaster
ENSFDAG00000014026	-	92	94.218	ENSETEG00000015060	-	86	94.218	Echinops_telfairi
ENSFDAG00000014026	-	99	67.901	ENSEBUG00000016502	prpf18	93	66.975	Eptatretus_burgeri
ENSFDAG00000014026	-	100	99.062	ENSEASG00005019373	-	94	99.062	Equus_asinus_asinus
ENSFDAG00000014026	-	100	99.062	ENSECAG00000006997	PRPF18	94	99.062	Equus_caballus
ENSFDAG00000014026	-	92	60.204	ENSEEUG00000001171	-	93	60.204	Erinaceus_europaeus
ENSFDAG00000014026	-	100	84.112	ENSELUG00000022190	prpf18	94	84.112	Esox_lucius
ENSFDAG00000014026	-	100	98.750	ENSFCAG00000004436	-	94	98.750	Felis_catus
ENSFDAG00000014026	-	92	90.461	ENSFALG00000001912	-	90	91.391	Ficedula_albicollis
ENSFDAG00000014026	-	85	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSFDAG00000014026	-	99	81.191	ENSGMOG00000012210	prpf18	93	81.191	Gadus_morhua
ENSFDAG00000014026	-	99	94.671	ENSGALG00000043593	-	93	94.671	Gallus_gallus
ENSFDAG00000014026	-	100	85.000	ENSGAFG00000006034	prpf18	94	85.000	Gambusia_affinis
ENSFDAG00000014026	-	100	83.125	ENSGACG00000012232	prpf18	94	83.125	Gasterosteus_aculeatus
ENSFDAG00000014026	-	99	94.984	ENSGAGG00000016878	-	93	94.984	Gopherus_agassizii
ENSFDAG00000014026	-	92	99.320	ENSGGOG00000025188	-	90	99.320	Gorilla_gorilla
ENSFDAG00000014026	-	100	86.562	ENSHBUG00000010264	prpf18	94	86.562	Haplochromis_burtoni
ENSFDAG00000014026	-	100	99.062	ENSHGLG00000018534	PRPF18	94	99.062	Heterocephalus_glaber_female
ENSFDAG00000014026	-	100	99.062	ENSHGLG00100012161	-	98	99.062	Heterocephalus_glaber_male
ENSFDAG00000014026	-	100	86.250	ENSHCOG00000015987	prpf18	94	86.250	Hippocampus_comes
ENSFDAG00000014026	-	100	83.384	ENSIPUG00000007432	prpf18	94	84.290	Ictalurus_punctatus
ENSFDAG00000014026	-	100	98.438	ENSSTOG00000008735	-	94	98.438	Ictidomys_tridecemlineatus
ENSFDAG00000014026	-	98	74.038	ENSJJAG00000015191	-	89	74.038	Jaculus_jaculus
ENSFDAG00000014026	-	100	99.375	ENSJJAG00000024041	-	94	99.375	Jaculus_jaculus
ENSFDAG00000014026	-	100	85.312	ENSKMAG00000012124	prpf18	94	85.312	Kryptolebias_marmoratus
ENSFDAG00000014026	-	100	86.875	ENSLBEG00000028466	prpf18	94	86.875	Labrus_bergylta
ENSFDAG00000014026	-	100	89.375	ENSLACG00000009885	prpf18	94	89.375	Latimeria_chalumnae
ENSFDAG00000014026	-	100	93.125	ENSLOCG00000016736	prpf18	94	93.125	Lepisosteus_oculatus
ENSFDAG00000014026	-	100	99.375	ENSLAFG00000007753	-	94	99.375	Loxodonta_africana
ENSFDAG00000014026	-	100	99.375	ENSMFAG00000000540	-	94	99.375	Macaca_fascicularis
ENSFDAG00000014026	-	100	99.375	ENSMMUG00000015071	PRPF18	94	99.375	Macaca_mulatta
ENSFDAG00000014026	-	100	99.375	ENSMNEG00000024679	-	94	99.375	Macaca_nemestrina
ENSFDAG00000014026	-	100	83.125	ENSMLEG00000031715	-	92	83.125	Mandrillus_leucophaeus
ENSFDAG00000014026	-	100	85.625	ENSMAMG00000006610	prpf18	94	85.625	Mastacembelus_armatus
ENSFDAG00000014026	-	100	86.562	ENSMZEG00005019392	prpf18	94	86.562	Maylandia_zebra
ENSFDAG00000014026	-	99	94.671	ENSMGAG00000005023	-	93	94.671	Meleagris_gallopavo
ENSFDAG00000014026	-	100	99.062	ENSMICG00000006572	-	94	99.062	Microcebus_murinus
ENSFDAG00000014026	-	100	99.375	ENSMOCG00000021468	Prpf18	94	99.375	Microtus_ochrogaster
ENSFDAG00000014026	-	100	85.312	ENSMMOG00000013012	prpf18	94	85.312	Mola_mola
ENSFDAG00000014026	-	100	86.875	ENSMODG00000024043	-	94	86.875	Monodelphis_domestica
ENSFDAG00000014026	-	96	91.456	ENSMODG00000016902	-	86	91.456	Monodelphis_domestica
ENSFDAG00000014026	-	92	86.441	ENSMALG00000005486	prpf18	85	86.780	Monopterus_albus
ENSFDAG00000014026	-	100	98.750	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSFDAG00000014026	-	100	98.438	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSFDAG00000014026	-	100	99.062	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSFDAG00000014026	-	100	98.125	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSFDAG00000014026	-	100	98.750	ENSMPUG00000000938	-	94	98.750	Mustela_putorius_furo
ENSFDAG00000014026	-	100	98.438	ENSMLUG00000009200	-	94	98.438	Myotis_lucifugus
ENSFDAG00000014026	-	100	99.062	ENSNGAG00000012500	-	94	99.062	Nannospalax_galili
ENSFDAG00000014026	-	72	91.304	ENSNGAG00000023550	-	82	91.304	Nannospalax_galili
ENSFDAG00000014026	-	100	86.562	ENSNBRG00000001778	prpf18	94	86.562	Neolamprologus_brichardi
ENSFDAG00000014026	-	100	99.375	ENSNLEG00000012186	-	94	99.375	Nomascus_leucogenys
ENSFDAG00000014026	-	81	79.151	ENSMEUG00000005032	-	75	79.151	Notamacropus_eugenii
ENSFDAG00000014026	-	76	79.835	ENSOPRG00000002153	-	92	79.835	Ochotona_princeps
ENSFDAG00000014026	-	100	98.438	ENSODEG00000003770	-	94	98.438	Octodon_degus
ENSFDAG00000014026	-	98	85.942	ENSONIG00000014854	prpf18	89	85.942	Oreochromis_niloticus
ENSFDAG00000014026	-	100	96.562	ENSOANG00000015404	-	94	96.562	Ornithorhynchus_anatinus
ENSFDAG00000014026	-	100	99.375	ENSOCUG00000027756	-	94	99.375	Oryctolagus_cuniculus
ENSFDAG00000014026	-	100	83.841	ENSORLG00000010293	prpf18	94	83.841	Oryzias_latipes
ENSFDAG00000014026	-	100	86.250	ENSORLG00020001530	prpf18	94	86.250	Oryzias_latipes_hni
ENSFDAG00000014026	-	100	86.250	ENSORLG00015013705	prpf18	94	86.250	Oryzias_latipes_hsok
ENSFDAG00000014026	-	100	87.500	ENSOMEG00000009167	prpf18	94	87.500	Oryzias_melastigma
ENSFDAG00000014026	-	100	98.750	ENSOGAG00000007294	-	94	98.750	Otolemur_garnettii
ENSFDAG00000014026	-	100	98.750	ENSOARG00000006243	-	94	98.750	Ovis_aries
ENSFDAG00000014026	-	100	99.375	ENSPPAG00000041959	-	94	99.375	Pan_paniscus
ENSFDAG00000014026	-	100	98.750	ENSPPRG00000000107	-	94	98.750	Panthera_pardus
ENSFDAG00000014026	-	100	98.750	ENSPTIG00000021094	-	94	98.750	Panthera_tigris_altaica
ENSFDAG00000014026	-	100	99.375	ENSPTRG00000002306	PRPF18	94	99.375	Pan_troglodytes
ENSFDAG00000014026	-	100	99.062	ENSPANG00000023346	-	94	99.062	Papio_anubis
ENSFDAG00000014026	-	100	84.195	ENSPKIG00000014128	prpf18	90	84.195	Paramormyrops_kingsleyae
ENSFDAG00000014026	-	99	94.984	ENSPSIG00000016064	-	93	94.984	Pelodiscus_sinensis
ENSFDAG00000014026	-	100	79.688	ENSPMGG00000016486	prpf18	93	79.688	Periophthalmus_magnuspinnatus
ENSFDAG00000014026	-	100	99.062	ENSPEMG00000013704	Prpf18	94	99.062	Peromyscus_maniculatus_bairdii
ENSFDAG00000014026	-	99	75.542	ENSPMAG00000000204	prpf18	93	75.542	Petromyzon_marinus
ENSFDAG00000014026	-	92	97.619	ENSPCIG00000012963	-	92	97.619	Phascolarctos_cinereus
ENSFDAG00000014026	-	100	83.537	ENSPFOG00000017611	prpf18	94	83.537	Poecilia_formosa
ENSFDAG00000014026	-	100	85.312	ENSPLAG00000000369	prpf18	94	85.312	Poecilia_latipinna
ENSFDAG00000014026	-	100	85.312	ENSPMEG00000005183	prpf18	94	85.312	Poecilia_mexicana
ENSFDAG00000014026	-	100	84.688	ENSPREG00000015232	prpf18	94	84.688	Poecilia_reticulata
ENSFDAG00000014026	-	100	99.062	ENSPPYG00000002101	PRPF18	94	99.062	Pongo_abelii
ENSFDAG00000014026	-	100	80.000	ENSPCAG00000010833	-	94	80.000	Procavia_capensis
ENSFDAG00000014026	-	92	99.320	ENSPCOG00000013057	-	93	99.320	Propithecus_coquereli
ENSFDAG00000014026	-	97	60.000	ENSPVAG00000002947	-	91	60.000	Pteropus_vampyrus
ENSFDAG00000014026	-	100	86.562	ENSPNYG00000003554	prpf18	94	86.562	Pundamilia_nyererei
ENSFDAG00000014026	-	100	86.930	ENSPNAG00000023151	prpf18	94	86.930	Pygocentrus_nattereri
ENSFDAG00000014026	-	100	98.125	ENSRNOG00000018396	Prpf18	94	98.125	Rattus_norvegicus
ENSFDAG00000014026	-	100	98.750	ENSRBIG00000028028	-	94	98.750	Rhinopithecus_bieti
ENSFDAG00000014026	-	100	99.062	ENSRROG00000040695	-	94	99.062	Rhinopithecus_roxellana
ENSFDAG00000014026	-	100	98.750	ENSSBOG00000034482	-	94	98.750	Saimiri_boliviensis_boliviensis
ENSFDAG00000014026	-	100	97.500	ENSSHAG00000016463	-	94	97.500	Sarcophilus_harrisii
ENSFDAG00000014026	-	99	78.056	ENSSHAG00000009669	-	93	78.056	Sarcophilus_harrisii
ENSFDAG00000014026	-	98	83.282	ENSSFOG00015022118	prpf18	93	78.462	Scleropages_formosus
ENSFDAG00000014026	-	83	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSFDAG00000014026	-	100	85.000	ENSSMAG00000005308	prpf18	94	85.000	Scophthalmus_maximus
ENSFDAG00000014026	-	100	87.188	ENSSDUG00000015428	prpf18	93	89.116	Seriola_dumerili
ENSFDAG00000014026	-	100	87.188	ENSSLDG00000023989	prpf18	94	87.188	Seriola_lalandi_dorsalis
ENSFDAG00000014026	-	100	66.875	ENSSARG00000005307	-	94	66.875	Sorex_araneus
ENSFDAG00000014026	-	99	94.671	ENSSPUG00000002619	-	93	94.671	Sphenodon_punctatus
ENSFDAG00000014026	-	100	86.562	ENSSPAG00000019502	prpf18	94	86.562	Stegastes_partitus
ENSFDAG00000014026	-	100	99.062	ENSSSCG00000026354	-	94	99.062	Sus_scrofa
ENSFDAG00000014026	-	99	94.671	ENSTGUG00000002286	-	93	94.671	Taeniopygia_guttata
ENSFDAG00000014026	-	100	84.062	ENSTRUG00000011278	prpf18	94	84.062	Takifugu_rubripes
ENSFDAG00000014026	-	100	84.062	ENSTNIG00000000911	prpf18	94	84.062	Tetraodon_nigroviridis
ENSFDAG00000014026	-	70	100.000	ENSTBEG00000013011	-	65	100.000	Tupaia_belangeri
ENSFDAG00000014026	-	100	99.062	ENSTTRG00000011117	PRPF18	94	99.062	Tursiops_truncatus
ENSFDAG00000014026	-	97	99.035	ENSUAMG00000001815	-	93	99.035	Ursus_americanus
ENSFDAG00000014026	-	100	93.750	ENSUMAG00000012329	-	93	93.750	Ursus_maritimus
ENSFDAG00000014026	-	100	92.812	ENSVPAG00000011486	-	93	92.812	Vicugna_pacos
ENSFDAG00000014026	-	100	99.062	ENSVVUG00000005453	-	94	99.062	Vulpes_vulpes
ENSFDAG00000014026	-	99	82.555	ENSXETG00000024057	prpf18	93	82.555	Xenopus_tropicalis
ENSFDAG00000014026	-	100	84.472	ENSXCOG00000020414	prpf18	94	84.472	Xiphophorus_couchianus
ENSFDAG00000014026	-	100	85.000	ENSXMAG00000004713	prpf18	85	85.000	Xiphophorus_maculatus