EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000014119 (Gene tree)
Gene ID: 104858135
Gene Symbol: -
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 47614 bases
Position: chrKN121627.1:4739243-4786856
Accession: 104858135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000004943	dsrm	PF00035.26	2.5e-31	1	3
ENSFDAP00000004943	dsrm	PF00035.26	2.5e-31	2	3
ENSFDAP00000004943	dsrm	PF00035.26	2.5e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000018446	-	3190	XM_010618238	ENSFDAP00000004943	495 (aa)	XP_010616540	-

Gene Model

Click here to download ENSFDAG00000014119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000014119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000014119	-	99	73.482	ENSFDAG00000020837	-	98	73.631
ENSFDAG00000014119	-	96	48.687	ENSFDAG00000005157	STAU2	99	51.543

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000014119	-	100	96.162	ENSG00000124214	STAU1	99	96.162	Homo_sapiens
ENSFDAG00000014119	-	99	72.800	ENSAPOG00000017260	stau1	71	72.800	Acanthochromis_polyacanthus
ENSFDAG00000014119	-	99	92.872	ENSAMEG00000013681	STAU1	69	92.872	Ailuropoda_melanoleuca
ENSFDAG00000014119	-	99	74.545	ENSACIG00000015918	stau1	71	75.202	Amphilophus_citrinellus
ENSFDAG00000014119	-	99	74.000	ENSAOCG00000012224	stau1	71	74.000	Amphiprion_ocellaris
ENSFDAG00000014119	-	99	74.000	ENSAPEG00000012308	stau1	71	74.000	Amphiprion_percula
ENSFDAG00000014119	-	99	74.194	ENSATEG00000024600	stau1	73	74.194	Anabas_testudineus
ENSFDAG00000014119	-	99	87.780	ENSAPLG00000010527	STAU1	69	87.780	Anas_platyrhynchos
ENSFDAG00000014119	-	99	87.602	ENSACAG00000015909	STAU1	70	87.602	Anolis_carolinensis
ENSFDAG00000014119	-	100	96.162	ENSANAG00000032714	STAU1	99	89.697	Aotus_nancymaae
ENSFDAG00000014119	-	99	73.200	ENSACLG00000012270	stau1	71	73.200	Astatotilapia_calliptera
ENSFDAG00000014119	-	100	72.289	ENSAMXG00000016812	stau1	84	72.289	Astyanax_mexicanus
ENSFDAG00000014119	-	100	93.131	ENSBTAG00000000241	STAU1	85	93.131	Bos_taurus
ENSFDAG00000014119	-	100	95.960	ENSCJAG00000016233	STAU1	85	95.152	Callithrix_jacchus
ENSFDAG00000014119	-	100	92.929	ENSCAFG00000011347	STAU1	83	92.929	Canis_familiaris
ENSFDAG00000014119	-	100	91.633	ENSCAFG00020017123	STAU1	82	91.633	Canis_lupus_dingo
ENSFDAG00000014119	-	100	92.727	ENSCHIG00000001799	-	100	86.667	Capra_hircus
ENSFDAG00000014119	-	100	92.323	ENSTSYG00000036179	-	85	92.323	Carlito_syrichta
ENSFDAG00000014119	-	100	93.939	ENSCAPG00000017041	STAU1	99	93.939	Cavia_aperea
ENSFDAG00000014119	-	100	94.545	ENSCPOG00000005566	STAU1	100	94.545	Cavia_porcellus
ENSFDAG00000014119	-	100	95.960	ENSCCAG00000034339	STAU1	85	95.960	Cebus_capucinus
ENSFDAG00000014119	-	100	96.162	ENSCATG00000028474	STAU1	99	96.162	Cercocebus_atys
ENSFDAG00000014119	-	100	78.672	ENSCLAG00000002784	-	98	78.672	Chinchilla_lanigera
ENSFDAG00000014119	-	100	98.384	ENSCLAG00000006516	-	100	98.384	Chinchilla_lanigera
ENSFDAG00000014119	-	100	95.354	ENSCSAG00000014986	STAU1	99	95.354	Chlorocebus_sabaeus
ENSFDAG00000014119	-	100	93.750	ENSCHOG00000001511	STAU1	85	93.750	Choloepus_hoffmanni
ENSFDAG00000014119	-	99	87.602	ENSCPBG00000026741	STAU1	71	87.602	Chrysemys_picta_bellii
ENSFDAG00000014119	-	100	94.949	ENSCANG00000039220	STAU1	99	86.089	Colobus_angolensis_palliatus
ENSFDAG00000014119	-	100	91.717	ENSCGRG00001013453	Stau1	100	91.717	Cricetulus_griseus_chok1gshd
ENSFDAG00000014119	-	100	91.717	ENSCGRG00000007216	Stau1	100	91.717	Cricetulus_griseus_crigri
ENSFDAG00000014119	-	99	66.194	ENSCSEG00000000792	stau1	68	66.935	Cynoglossus_semilaevis
ENSFDAG00000014119	-	99	71.545	ENSCVAG00000005906	stau1	86	72.211	Cyprinodon_variegatus
ENSFDAG00000014119	-	99	72.255	ENSDARG00000044182	stau1	78	72.255	Danio_rerio
ENSFDAG00000014119	-	100	93.952	ENSDNOG00000014933	STAU1	83	93.952	Dasypus_novemcinctus
ENSFDAG00000014119	-	100	91.111	ENSDORG00000030220	Stau1	100	91.111	Dipodomys_ordii
ENSFDAG00000014119	-	84	96.522	ENSETEG00000018235	STAU1	72	96.522	Echinops_telfairi
ENSFDAG00000014119	-	100	94.747	ENSEASG00005023343	STAU1	88	94.324	Equus_asinus_asinus
ENSFDAG00000014119	-	100	93.535	ENSECAG00000012894	STAU1	85	93.535	Equus_caballus
ENSFDAG00000014119	-	81	92.020	ENSEEUG00000014344	STAU1	68	92.020	Erinaceus_europaeus
ENSFDAG00000014119	-	99	72.047	ENSELUG00000002529	stau1	77	72.047	Esox_lucius
ENSFDAG00000014119	-	100	93.939	ENSFCAG00000001447	STAU1	99	86.869	Felis_catus
ENSFDAG00000014119	-	99	84.553	ENSFALG00000012940	STAU1	70	84.553	Ficedula_albicollis
ENSFDAG00000014119	-	99	72.400	ENSFHEG00000013517	stau1	85	72.121	Fundulus_heteroclitus
ENSFDAG00000014119	-	99	62.818	ENSGMOG00000016850	stau1	71	62.818	Gadus_morhua
ENSFDAG00000014119	-	99	88.187	ENSGALG00000004736	STAU1	70	87.398	Gallus_gallus
ENSFDAG00000014119	-	99	73.146	ENSGAFG00000010437	stau1	71	73.146	Gambusia_affinis
ENSFDAG00000014119	-	99	73.146	ENSGACG00000001352	stau1	72	72.854	Gasterosteus_aculeatus
ENSFDAG00000014119	-	99	86.382	ENSGAGG00000009825	STAU1	70	86.382	Gopherus_agassizii
ENSFDAG00000014119	-	100	96.364	ENSGGOG00000025351	STAU1	100	95.890	Gorilla_gorilla
ENSFDAG00000014119	-	99	73.400	ENSHBUG00000023668	stau1	71	73.400	Haplochromis_burtoni
ENSFDAG00000014119	-	100	97.172	ENSHGLG00000008730	STAU1	100	97.172	Heterocephalus_glaber_female
ENSFDAG00000014119	-	100	98.384	ENSHGLG00100000098	STAU1	100	98.384	Heterocephalus_glaber_male
ENSFDAG00000014119	-	99	70.423	ENSHCOG00000018461	stau1	70	70.423	Hippocampus_comes
ENSFDAG00000014119	-	94	73.134	ENSIPUG00000023725	stau1	70	73.134	Ictalurus_punctatus
ENSFDAG00000014119	-	100	94.545	ENSSTOG00000003634	STAU1	100	94.545	Ictidomys_tridecemlineatus
ENSFDAG00000014119	-	100	92.929	ENSJJAG00000020032	Stau1	100	92.929	Jaculus_jaculus
ENSFDAG00000014119	-	99	70.850	ENSKMAG00000007135	stau1	71	71.515	Kryptolebias_marmoratus
ENSFDAG00000014119	-	99	71.485	ENSLBEG00000020172	stau1	71	71.485	Labrus_bergylta
ENSFDAG00000014119	-	99	81.616	ENSLACG00000016157	STAU1	70	80.318	Latimeria_chalumnae
ENSFDAG00000014119	-	99	78.427	ENSLOCG00000003134	stau1	71	78.427	Lepisosteus_oculatus
ENSFDAG00000014119	-	100	92.121	ENSLAFG00000003238	STAU1	96	92.121	Loxodonta_africana
ENSFDAG00000014119	-	100	96.162	ENSMFAG00000040931	STAU1	100	95.956	Macaca_fascicularis
ENSFDAG00000014119	-	100	96.162	ENSMMUG00000002302	STAU1	100	95.956	Macaca_mulatta
ENSFDAG00000014119	-	100	96.162	ENSMNEG00000033821	STAU1	99	96.162	Macaca_nemestrina
ENSFDAG00000014119	-	100	95.152	ENSMLEG00000031383	STAU1	85	95.152	Mandrillus_leucophaeus
ENSFDAG00000014119	-	99	74.597	ENSMAMG00000017586	stau1	74	74.597	Mastacembelus_armatus
ENSFDAG00000014119	-	99	73.200	ENSMZEG00005015605	stau1	71	73.200	Maylandia_zebra
ENSFDAG00000014119	-	99	87.984	ENSMGAG00000004719	STAU1	69	87.984	Meleagris_gallopavo
ENSFDAG00000014119	-	100	91.515	ENSMAUG00000013846	Stau1	100	91.515	Mesocricetus_auratus
ENSFDAG00000014119	-	100	95.354	ENSMICG00000001995	STAU1	85	95.354	Microcebus_murinus
ENSFDAG00000014119	-	100	92.727	ENSMOCG00000018743	Stau1	100	92.727	Microtus_ochrogaster
ENSFDAG00000014119	-	100	71.573	ENSMMOG00000015455	stau1	98	72.032	Mola_mola
ENSFDAG00000014119	-	100	90.303	ENSMODG00000016276	STAU1	73	90.303	Monodelphis_domestica
ENSFDAG00000014119	-	99	73.800	ENSMALG00000000045	stau1	71	73.800	Monopterus_albus
ENSFDAG00000014119	-	100	90.909	MGP_CAROLIEiJ_G0024699	Stau1	100	90.909	Mus_caroli
ENSFDAG00000014119	-	100	90.303	ENSMUSG00000039536	Stau1	100	90.303	Mus_musculus
ENSFDAG00000014119	-	100	90.505	MGP_PahariEiJ_G0026141	Stau1	100	90.505	Mus_pahari
ENSFDAG00000014119	-	100	89.899	MGP_SPRETEiJ_G0025619	Stau1	100	89.899	Mus_spretus
ENSFDAG00000014119	-	99	93.686	ENSMPUG00000017581	STAU1	72	93.686	Mustela_putorius_furo
ENSFDAG00000014119	-	100	93.333	ENSMLUG00000008407	STAU1	83	93.333	Myotis_lucifugus
ENSFDAG00000014119	-	100	94.747	ENSNGAG00000007108	Stau1	100	94.747	Nannospalax_galili
ENSFDAG00000014119	-	99	73.400	ENSNBRG00000017596	stau1	71	73.400	Neolamprologus_brichardi
ENSFDAG00000014119	-	100	95.960	ENSNLEG00000006955	STAU1	99	95.960	Nomascus_leucogenys
ENSFDAG00000014119	-	95	90.812	ENSMEUG00000003263	STAU1	80	90.812	Notamacropus_eugenii
ENSFDAG00000014119	-	100	92.137	ENSOPRG00000014569	STAU1	86	92.137	Ochotona_princeps
ENSFDAG00000014119	-	100	96.162	ENSODEG00000006523	STAU1	99	96.162	Octodon_degus
ENSFDAG00000014119	-	99	73.600	ENSONIG00000004152	stau1	68	73.600	Oreochromis_niloticus
ENSFDAG00000014119	-	99	88.008	ENSOANG00000006394	STAU1	70	88.008	Ornithorhynchus_anatinus
ENSFDAG00000014119	-	100	93.737	ENSOCUG00000006214	STAU1	85	93.737	Oryctolagus_cuniculus
ENSFDAG00000014119	-	99	71.486	ENSOMEG00000002388	stau1	71	71.486	Oryzias_melastigma
ENSFDAG00000014119	-	100	94.545	ENSOGAG00000002127	STAU1	83	94.545	Otolemur_garnettii
ENSFDAG00000014119	-	100	64.427	ENSOGAG00000028222	-	98	64.870	Otolemur_garnettii
ENSFDAG00000014119	-	100	92.727	ENSOARG00000012204	STAU1	83	92.727	Ovis_aries
ENSFDAG00000014119	-	100	96.364	ENSPPAG00000032023	STAU1	100	95.890	Pan_paniscus
ENSFDAG00000014119	-	100	93.939	ENSPPRG00000003436	STAU1	99	93.939	Panthera_pardus
ENSFDAG00000014119	-	100	93.939	ENSPTIG00000011768	STAU1	99	92.629	Panthera_tigris_altaica
ENSFDAG00000014119	-	100	96.364	ENSPTRG00000023130	STAU1	100	95.890	Pan_troglodytes
ENSFDAG00000014119	-	100	95.152	ENSPANG00000020560	STAU1	99	90.524	Papio_anubis
ENSFDAG00000014119	-	99	73.200	ENSPKIG00000024588	stau1	71	73.200	Paramormyrops_kingsleyae
ENSFDAG00000014119	-	99	86.179	ENSPSIG00000010731	STAU1	70	86.179	Pelodiscus_sinensis
ENSFDAG00000014119	-	99	74.245	ENSPMGG00000018553	stau1	98	71.400	Periophthalmus_magnuspinnatus
ENSFDAG00000014119	-	100	91.919	ENSPEMG00000022045	Stau1	100	91.919	Peromyscus_maniculatus_bairdii
ENSFDAG00000014119	-	100	91.313	ENSPCIG00000023269	STAU1	99	85.859	Phascolarctos_cinereus
ENSFDAG00000014119	-	99	73.200	ENSPFOG00000017253	stau1	71	73.200	Poecilia_formosa
ENSFDAG00000014119	-	63	66.352	ENSPLAG00000014829	stau1	78	68.553	Poecilia_latipinna
ENSFDAG00000014119	-	93	72.650	ENSPMEG00000007495	stau1	67	72.650	Poecilia_mexicana
ENSFDAG00000014119	-	99	72.800	ENSPREG00000003477	stau1	71	72.800	Poecilia_reticulata
ENSFDAG00000014119	-	100	95.152	ENSPPYG00000011111	STAU1	85	95.152	Pongo_abelii
ENSFDAG00000014119	-	93	83.550	ENSPCAG00000002459	STAU1	84	83.550	Procavia_capensis
ENSFDAG00000014119	-	100	95.354	ENSPCOG00000027746	STAU1	99	95.354	Propithecus_coquereli
ENSFDAG00000014119	-	83	98.148	ENSPVAG00000015019	STAU1	71	98.148	Pteropus_vampyrus
ENSFDAG00000014119	-	99	73.400	ENSPNYG00000014436	stau1	71	73.400	Pundamilia_nyererei
ENSFDAG00000014119	-	99	71.769	ENSPNAG00000011323	stau1	77	71.769	Pygocentrus_nattereri
ENSFDAG00000014119	-	100	91.111	ENSRNOG00000007781	Stau1	100	91.111	Rattus_norvegicus
ENSFDAG00000014119	-	100	96.162	ENSRBIG00000037345	STAU1	99	96.162	Rhinopithecus_bieti
ENSFDAG00000014119	-	100	95.152	ENSRROG00000039008	STAU1	99	94.949	Rhinopithecus_roxellana
ENSFDAG00000014119	-	100	95.960	ENSSBOG00000034448	STAU1	99	91.919	Saimiri_boliviensis_boliviensis
ENSFDAG00000014119	-	100	90.505	ENSSHAG00000009492	STAU1	83	90.505	Sarcophilus_harrisii
ENSFDAG00000014119	-	99	74.798	ENSSFOG00015021497	stau1	85	71.705	Scleropages_formosus
ENSFDAG00000014119	-	99	73.200	ENSSMAG00000017410	stau1	71	73.200	Scophthalmus_maximus
ENSFDAG00000014119	-	99	74.600	ENSSDUG00000019439	stau1	71	74.600	Seriola_dumerili
ENSFDAG00000014119	-	99	74.600	ENSSLDG00000025040	stau1	71	74.600	Seriola_lalandi_dorsalis
ENSFDAG00000014119	-	99	87.398	ENSSPUG00000017983	STAU1	73	87.373	Sphenodon_punctatus
ENSFDAG00000014119	-	99	74.000	ENSSPAG00000019275	stau1	71	74.000	Stegastes_partitus
ENSFDAG00000014119	-	100	94.343	ENSSSCG00000027444	STAU1	99	94.343	Sus_scrofa
ENSFDAG00000014119	-	99	86.179	ENSTGUG00000008784	STAU1	69	86.179	Taeniopygia_guttata
ENSFDAG00000014119	-	99	73.589	ENSTRUG00000005837	stau1	70	74.245	Takifugu_rubripes
ENSFDAG00000014119	-	99	72.854	ENSTNIG00000014732	stau1	73	72.854	Tetraodon_nigroviridis
ENSFDAG00000014119	-	100	80.645	ENSTBEG00000009404	STAU1	85	80.645	Tupaia_belangeri
ENSFDAG00000014119	-	95	90.812	ENSTTRG00000004285	STAU1	80	90.812	Tursiops_truncatus
ENSFDAG00000014119	-	100	91.633	ENSUAMG00000025449	STAU1	99	91.633	Ursus_americanus
ENSFDAG00000014119	-	75	89.655	ENSUMAG00000024475	STAU1	87	89.655	Ursus_maritimus
ENSFDAG00000014119	-	100	94.141	ENSVPAG00000001313	STAU1	85	94.141	Vicugna_pacos
ENSFDAG00000014119	-	100	91.833	ENSVVUG00000022325	STAU1	73	91.833	Vulpes_vulpes
ENSFDAG00000014119	-	99	80.081	ENSXETG00000001783	stau1	70	80.285	Xenopus_tropicalis
ENSFDAG00000014119	-	55	69.708	ENSXCOG00000008804	stau1	72	69.310	Xiphophorus_couchianus
ENSFDAG00000014119	-	99	73.146	ENSXMAG00000016175	stau1	71	73.146	Xiphophorus_maculatus