EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000014210 (Gene tree)
Gene ID: 104848957
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 33755 bases
Position: chrKN123809.1:12378526-12412280
Accession: 104848957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000005044	KH_1	PF00013.29	1.4e-69	1	4
ENSFDAP00000005044	KH_1	PF00013.29	1.4e-69	2	4
ENSFDAP00000005044	KH_1	PF00013.29	1.4e-69	3	4
ENSFDAP00000005044	KH_1	PF00013.29	1.4e-69	4	4
ENSFDAP00000005078	KH_1	PF00013.29	5.5e-17	1	1
ENSFDAP00000005044	KH_2	PF07650.17	1.5e-22	1	2
ENSFDAP00000005044	KH_2	PF07650.17	1.5e-22	2	2
ENSFDAP00000005078	KH_2	PF07650.17	1.7e-06	1	1
ENSFDAP00000005044	DUF1897	PF09005.10	7.1e-12	1	2
ENSFDAP00000005044	DUF1897	PF09005.10	7.1e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000018536	FUBP1-201	2243	XM_010605199	ENSFDAP00000005044	655 (aa)	XP_010603501	UPI00053F6E46
ENSFDAT00000018569	FUBP1-202	2644	-	ENSFDAP00000005078	146 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000014210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000014210's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000014210	FUBP1	61	53.027	ENSFDAG00000010889	KHSRP	92	77.778
ENSFDAG00000014210	FUBP1	96	51.429	ENSFDAG00000013466	FUBP3	83	65.578
ENSFDAG00000014210	FUBP1	55	34.524	ENSFDAG00000012692	PCBP4	74	34.524
ENSFDAG00000014210	FUBP1	51	40.625	ENSFDAG00000009117	PCBP3	59	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000014210	FUBP1	100	100.000	ENSG00000162613	FUBP1	100	99.084	Homo_sapiens
ENSFDAG00000014210	FUBP1	100	70.270	ENSAPOG00000014845	fubp1	70	75.435	Acanthochromis_polyacanthus
ENSFDAG00000014210	FUBP1	100	100.000	ENSAMEG00000007372	FUBP1	99	95.796	Ailuropoda_melanoleuca
ENSFDAG00000014210	FUBP1	100	70.270	ENSACIG00000020024	fubp1	69	73.904	Amphilophus_citrinellus
ENSFDAG00000014210	FUBP1	100	70.270	ENSAPEG00000012232	fubp1	72	76.419	Amphiprion_percula
ENSFDAG00000014210	FUBP1	99	71.233	ENSATEG00000018619	fubp1	70	77.974	Anabas_testudineus
ENSFDAG00000014210	FUBP1	100	95.918	ENSAPLG00000005965	FUBP1	100	97.181	Anas_platyrhynchos
ENSFDAG00000014210	FUBP1	95	92.086	ENSACAG00000006310	FUBP1	96	87.281	Anolis_carolinensis
ENSFDAG00000014210	FUBP1	100	70.270	ENSACLG00000006708	fubp1	72	77.533	Astatotilapia_calliptera
ENSFDAG00000014210	FUBP1	100	78.912	ENSAMXG00000005525	fubp1	64	86.047	Astyanax_mexicanus
ENSFDAG00000014210	FUBP1	100	100.000	ENSCJAG00000007062	FUBP1	100	98.931	Callithrix_jacchus
ENSFDAG00000014210	FUBP1	100	100.000	ENSCAFG00000020361	FUBP1	99	99.222	Canis_familiaris
ENSFDAG00000014210	FUBP1	100	99.315	ENSTSYG00000000148	FUBP1	100	98.862	Carlito_syrichta
ENSFDAG00000014210	FUBP1	57	98.901	ENSCAPG00000011052	-	67	98.901	Cavia_aperea
ENSFDAG00000014210	FUBP1	100	99.315	ENSCPOG00000002757	FUBP1	100	99.240	Cavia_porcellus
ENSFDAG00000014210	FUBP1	100	98.496	ENSCCAG00000036537	FUBP1	100	84.682	Cebus_capucinus
ENSFDAG00000014210	FUBP1	100	100.000	ENSCATG00000042126	FUBP1	100	98.931	Cercocebus_atys
ENSFDAG00000014210	FUBP1	100	100.000	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSFDAG00000014210	FUBP1	100	100.000	ENSCSAG00000001402	FUBP1	99	99.067	Chlorocebus_sabaeus
ENSFDAG00000014210	FUBP1	100	99.237	ENSCHOG00000008177	FUBP1	100	99.237	Choloepus_hoffmanni
ENSFDAG00000014210	FUBP1	100	100.000	ENSCGRG00001007103	Fubp1	100	98.024	Cricetulus_griseus_chok1gshd
ENSFDAG00000014210	FUBP1	100	100.000	ENSCGRG00000003372	Fubp1	100	98.706	Cricetulus_griseus_crigri
ENSFDAG00000014210	FUBP1	100	70.270	ENSCSEG00000021412	fubp1	70	76.304	Cynoglossus_semilaevis
ENSFDAG00000014210	FUBP1	100	70.270	ENSCVAG00000014487	fubp1	60	84.703	Cyprinodon_variegatus
ENSFDAG00000014210	FUBP1	100	72.603	ENSDARG00000029248	fubp1	70	76.559	Danio_rerio
ENSFDAG00000014210	FUBP1	67	71.795	ENSDNOG00000034565	-	82	72.500	Dasypus_novemcinctus
ENSFDAG00000014210	FUBP1	100	99.315	ENSDORG00000016534	Fubp1	100	98.779	Dipodomys_ordii
ENSFDAG00000014210	FUBP1	77	97.983	ENSETEG00000000948	-	62	97.983	Echinops_telfairi
ENSFDAG00000014210	FUBP1	81	47.920	ENSEBUG00000016143	fubp1	64	58.462	Eptatretus_burgeri
ENSFDAG00000014210	FUBP1	100	100.000	ENSEEUG00000001287	FUBP1	100	85.649	Erinaceus_europaeus
ENSFDAG00000014210	FUBP1	100	76.190	ENSELUG00000007990	fubp1	70	74.082	Esox_lucius
ENSFDAG00000014210	FUBP1	100	95.918	ENSFALG00000005768	FUBP1	69	97.137	Ficedula_albicollis
ENSFDAG00000014210	FUBP1	100	70.270	ENSFHEG00000005230	fubp1	70	78.166	Fundulus_heteroclitus
ENSFDAG00000014210	FUBP1	98	66.154	ENSGMOG00000003370	fubp1	70	69.298	Gadus_morhua
ENSFDAG00000014210	FUBP1	100	95.918	ENSGALG00000008939	FUBP1	99	96.434	Gallus_gallus
ENSFDAG00000014210	FUBP1	100	70.270	ENSGAFG00000020972	fubp1	91	76.871	Gambusia_affinis
ENSFDAG00000014210	FUBP1	100	69.333	ENSGACG00000016563	fubp1	70	75.658	Gasterosteus_aculeatus
ENSFDAG00000014210	FUBP1	100	70.270	ENSHBUG00000009835	fubp1	85	76.703	Haplochromis_burtoni
ENSFDAG00000014210	FUBP1	100	100.000	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSFDAG00000014210	FUBP1	86	93.600	ENSHGLG00000002808	-	72	91.228	Heterocephalus_glaber_female
ENSFDAG00000014210	FUBP1	86	93.600	ENSHGLG00100001414	-	72	91.886	Heterocephalus_glaber_male
ENSFDAG00000014210	FUBP1	100	100.000	ENSHGLG00100003417	-	100	99.240	Heterocephalus_glaber_male
ENSFDAG00000014210	FUBP1	100	69.595	ENSHCOG00000000910	fubp1	70	74.522	Hippocampus_comes
ENSFDAG00000014210	FUBP1	100	78.912	ENSIPUG00000009896	fubp1	70	76.840	Ictalurus_punctatus
ENSFDAG00000014210	FUBP1	100	100.000	ENSSTOG00000014312	FUBP1	100	98.784	Ictidomys_tridecemlineatus
ENSFDAG00000014210	FUBP1	100	100.000	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSFDAG00000014210	FUBP1	100	70.270	ENSKMAG00000018897	fubp1	69	76.211	Kryptolebias_marmoratus
ENSFDAG00000014210	FUBP1	100	69.595	ENSLBEG00000012700	fubp1	72	74.788	Labrus_bergylta
ENSFDAG00000014210	FUBP1	96	81.560	ENSLOCG00000003745	fubp1	92	73.975	Lepisosteus_oculatus
ENSFDAG00000014210	FUBP1	100	100.000	ENSLAFG00000003273	FUBP1	99	97.834	Loxodonta_africana
ENSFDAG00000014210	FUBP1	100	100.000	ENSMFAG00000031825	FUBP1	100	98.931	Macaca_fascicularis
ENSFDAG00000014210	FUBP1	100	100.000	ENSMMUG00000002899	FUBP1	100	98.931	Macaca_mulatta
ENSFDAG00000014210	FUBP1	100	100.000	ENSMNEG00000045212	FUBP1	100	98.931	Macaca_nemestrina
ENSFDAG00000014210	FUBP1	100	70.270	ENSMZEG00005024298	fubp1	70	78.166	Maylandia_zebra
ENSFDAG00000014210	FUBP1	100	95.918	ENSMGAG00000009424	FUBP1	99	96.694	Meleagris_gallopavo
ENSFDAG00000014210	FUBP1	100	99.315	ENSMAUG00000016428	Fubp1	100	98.176	Mesocricetus_auratus
ENSFDAG00000014210	FUBP1	100	100.000	ENSMOCG00000014751	Fubp1	100	98.658	Microtus_ochrogaster
ENSFDAG00000014210	FUBP1	100	68.919	ENSMMOG00000019463	fubp1	64	82.535	Mola_mola
ENSFDAG00000014210	FUBP1	100	86.747	ENSMODG00000020804	FUBP1	100	90.566	Monodelphis_domestica
ENSFDAG00000014210	FUBP1	100	70.270	ENSMALG00000015173	fubp1	70	76.638	Monopterus_albus
ENSFDAG00000014210	FUBP1	100	100.000	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.168	Mus_caroli
ENSFDAG00000014210	FUBP1	100	99.315	ENSMUSG00000028034	Fubp1	100	97.863	Mus_musculus
ENSFDAG00000014210	FUBP1	100	100.000	MGP_PahariEiJ_G0027191	Fubp1	100	98.321	Mus_pahari
ENSFDAG00000014210	FUBP1	100	100.000	MGP_SPRETEiJ_G0026693	Fubp1	100	98.015	Mus_spretus
ENSFDAG00000014210	FUBP1	100	98.630	ENSMLUG00000014802	FUBP1	99	94.918	Myotis_lucifugus
ENSFDAG00000014210	FUBP1	100	100.000	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSFDAG00000014210	FUBP1	100	70.270	ENSNBRG00000015099	fubp1	72	77.533	Neolamprologus_brichardi
ENSFDAG00000014210	FUBP1	100	100.000	ENSNLEG00000009772	FUBP1	100	95.282	Nomascus_leucogenys
ENSFDAG00000014210	FUBP1	90	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSFDAG00000014210	FUBP1	91	97.260	ENSOPRG00000001175	FUBP1	91	97.260	Ochotona_princeps
ENSFDAG00000014210	FUBP1	100	100.000	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSFDAG00000014210	FUBP1	100	69.178	ENSODEG00000003657	-	99	66.511	Octodon_degus
ENSFDAG00000014210	FUBP1	100	70.270	ENSONIG00000018381	fubp1	69	78.166	Oreochromis_niloticus
ENSFDAG00000014210	FUBP1	100	98.630	ENSOANG00000009777	FUBP1	99	92.066	Ornithorhynchus_anatinus
ENSFDAG00000014210	FUBP1	98	68.740	ENSORLG00000003540	fubp1	71	77.533	Oryzias_latipes
ENSFDAG00000014210	FUBP1	100	67.808	ENSORLG00020005908	fubp1	70	77.093	Oryzias_latipes_hni
ENSFDAG00000014210	FUBP1	98	70.762	ENSORLG00015008779	fubp1	70	77.093	Oryzias_latipes_hsok
ENSFDAG00000014210	FUBP1	98	70.342	ENSOMEG00000021943	fubp1	70	75.991	Oryzias_melastigma
ENSFDAG00000014210	FUBP1	100	100.000	ENSOGAG00000014233	FUBP1	99	95.224	Otolemur_garnettii
ENSFDAG00000014210	FUBP1	100	100.000	ENSOARG00000013259	FUBP1	99	95.777	Ovis_aries
ENSFDAG00000014210	FUBP1	100	100.000	ENSPPRG00000000413	FUBP1	100	99.237	Panthera_pardus
ENSFDAG00000014210	FUBP1	100	100.000	ENSPTIG00000019450	FUBP1	100	99.237	Panthera_tigris_altaica
ENSFDAG00000014210	FUBP1	100	96.599	ENSPSIG00000012965	FUBP1	99	96.453	Pelodiscus_sinensis
ENSFDAG00000014210	FUBP1	100	99.315	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSFDAG00000014210	FUBP1	57	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSFDAG00000014210	FUBP1	100	70.270	ENSPLAG00000021170	fubp1	72	78.166	Poecilia_latipinna
ENSFDAG00000014210	FUBP1	98	72.558	ENSPMEG00000004747	fubp1	73	78.166	Poecilia_mexicana
ENSFDAG00000014210	FUBP1	100	70.270	ENSPREG00000017911	fubp1	70	78.166	Poecilia_reticulata
ENSFDAG00000014210	FUBP1	71	99.134	ENSPPYG00000001219	-	70	99.134	Pongo_abelii
ENSFDAG00000014210	FUBP1	100	100.000	ENSPCAG00000012617	FUBP1	100	98.931	Procavia_capensis
ENSFDAG00000014210	FUBP1	100	100.000	ENSPCOG00000024974	FUBP1	100	99.237	Propithecus_coquereli
ENSFDAG00000014210	FUBP1	100	94.809	ENSPVAG00000014637	FUBP1	100	94.809	Pteropus_vampyrus
ENSFDAG00000014210	FUBP1	100	70.270	ENSPNYG00000004552	fubp1	73	78.194	Pundamilia_nyererei
ENSFDAG00000014210	FUBP1	100	79.592	ENSPNAG00000016207	fubp1	87	77.007	Pygocentrus_nattereri
ENSFDAG00000014210	FUBP1	100	100.000	ENSRNOG00000043370	Fubp1	99	97.988	Rattus_norvegicus
ENSFDAG00000014210	FUBP1	100	100.000	ENSRBIG00000042950	FUBP1	99	99.067	Rhinopithecus_bieti
ENSFDAG00000014210	FUBP1	100	100.000	ENSRROG00000043534	FUBP1	99	99.067	Rhinopithecus_roxellana
ENSFDAG00000014210	FUBP1	100	100.000	ENSSBOG00000027299	FUBP1	100	98.931	Saimiri_boliviensis_boliviensis
ENSFDAG00000014210	FUBP1	100	98.630	ENSSHAG00000005367	FUBP1	100	97.577	Sarcophilus_harrisii
ENSFDAG00000014210	FUBP1	100	77.551	ENSSFOG00015010213	fubp1	70	79.167	Scleropages_formosus
ENSFDAG00000014210	FUBP1	100	70.270	ENSSDUG00000007383	fubp1	68	76.119	Seriola_dumerili
ENSFDAG00000014210	FUBP1	100	70.270	ENSSLDG00000022863	fubp1	72	76.535	Seriola_lalandi_dorsalis
ENSFDAG00000014210	FUBP1	100	97.133	ENSSARG00000011730	FUBP1	58	98.980	Sorex_araneus
ENSFDAG00000014210	FUBP1	98	88.404	ENSSPUG00000008389	FUBP1	99	86.237	Sphenodon_punctatus
ENSFDAG00000014210	FUBP1	100	70.270	ENSSPAG00000010161	fubp1	69	77.313	Stegastes_partitus
ENSFDAG00000014210	FUBP1	100	92.157	ENSTGUG00000006841	FUBP1	100	96.059	Taeniopygia_guttata
ENSFDAG00000014210	FUBP1	100	69.863	ENSTRUG00000004615	fubp1	65	77.511	Takifugu_rubripes
ENSFDAG00000014210	FUBP1	82	99.405	ENSTBEG00000017333	FUBP1	67	99.405	Tupaia_belangeri
ENSFDAG00000014210	FUBP1	100	100.000	ENSTTRG00000000096	FUBP1	100	99.084	Tursiops_truncatus
ENSFDAG00000014210	FUBP1	100	100.000	ENSVPAG00000004709	FUBP1	100	99.077	Vicugna_pacos
ENSFDAG00000014210	FUBP1	98	68.462	ENSXCOG00000019354	fubp1	72	76.638	Xiphophorus_couchianus
ENSFDAG00000014210	FUBP1	100	70.270	ENSXMAG00000007168	fubp1	73	77.948	Xiphophorus_maculatus