EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000014291 (Gene tree)
Gene ID: 104867413
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 11304 bases
Position: chrKN122502.1:156896-168199
Accession: 104867413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000005226	RRM_1	PF00076.22	1.4e-57	1	4
ENSFDAP00000005226	RRM_1	PF00076.22	1.4e-57	2	4
ENSFDAP00000005226	RRM_1	PF00076.22	1.4e-57	3	4
ENSFDAP00000005226	RRM_1	PF00076.22	1.4e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000018688	NCL-201	2426	XM_010631753	ENSFDAP00000005226	708 (aa)	XP_010630055	-

Gene Model

Click here to download ENSFDAG00000014291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000014291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000014291	NCL	62	91.403	ENSG00000115053	NCL	100	89.527	Homo_sapiens
ENSFDAG00000014291	NCL	62	94.533	ENSAMEG00000016289	NCL	91	85.213	Ailuropoda_melanoleuca
ENSFDAG00000014291	NCL	92	81.202	ENSANAG00000035814	-	99	86.620	Aotus_nancymaae
ENSFDAG00000014291	NCL	99	67.614	ENSANAG00000024378	-	85	76.866	Aotus_nancymaae
ENSFDAG00000014291	NCL	94	80.116	ENSBTAG00000016174	NCL	91	83.560	Bos_taurus
ENSFDAG00000014291	NCL	54	88.525	ENSBTAG00000050728	-	80	88.525	Bos_taurus
ENSFDAG00000014291	NCL	67	90.000	ENSBTAG00000026909	-	84	90.377	Bos_taurus
ENSFDAG00000014291	NCL	92	82.722	ENSCJAG00000013538	NCL	99	85.014	Callithrix_jacchus
ENSFDAG00000014291	NCL	92	82.875	ENSCAFG00000011037	NCL	91	85.321	Canis_familiaris
ENSFDAG00000014291	NCL	85	82.208	ENSCAFG00020023145	NCL	89	84.843	Canis_lupus_dingo
ENSFDAG00000014291	NCL	92	94.690	ENSCHIG00000021052	-	93	94.774	Capra_hircus
ENSFDAG00000014291	NCL	92	74.351	ENSCHIG00000026149	-	92	75.228	Capra_hircus
ENSFDAG00000014291	NCL	85	81.609	ENSCHIG00000010894	-	100	84.024	Capra_hircus
ENSFDAG00000014291	NCL	92	61.385	ENSCHIG00000012143	-	91	69.254	Capra_hircus
ENSFDAG00000014291	NCL	92	84.793	ENSTSYG00000004355	-	91	84.793	Carlito_syrichta
ENSFDAG00000014291	NCL	90	72.013	ENSTSYG00000036886	-	91	72.531	Carlito_syrichta
ENSFDAG00000014291	NCL	95	83.158	ENSTSYG00000029779	-	96	83.130	Carlito_syrichta
ENSFDAG00000014291	NCL	92	82.362	ENSCAPG00000009405	NCL	91	82.975	Cavia_aperea
ENSFDAG00000014291	NCL	92	86.043	ENSCPOG00000001034	NCL	91	86.350	Cavia_porcellus
ENSFDAG00000014291	NCL	84	87.437	ENSCCAG00000000551	-	90	87.562	Cebus_capucinus
ENSFDAG00000014291	NCL	54	94.987	ENSCCAG00000021040	-	99	86.197	Cebus_capucinus
ENSFDAG00000014291	NCL	92	87.809	ENSCATG00000037033	NCL	91	88.117	Cercocebus_atys
ENSFDAG00000014291	NCL	100	90.028	ENSCLAG00000013080	NCL	91	89.877	Chinchilla_lanigera
ENSFDAG00000014291	NCL	60	95.000	ENSCSAG00000006660	NCL	95	95.672	Chlorocebus_sabaeus
ENSFDAG00000014291	NCL	62	75.286	ENSCHOG00000012860	NCL	78	79.101	Choloepus_hoffmanni
ENSFDAG00000014291	NCL	92	69.545	ENSCGRG00001022350	-	94	69.970	Cricetulus_griseus_chok1gshd
ENSFDAG00000014291	NCL	92	82.542	ENSCGRG00001024315	-	90	83.002	Cricetulus_griseus_chok1gshd
ENSFDAG00000014291	NCL	92	68.333	ENSCGRG00000000507	-	92	67.378	Cricetulus_griseus_crigri
ENSFDAG00000014291	NCL	86	81.818	ENSCGRG00000017894	-	88	82.792	Cricetulus_griseus_crigri
ENSFDAG00000014291	NCL	100	81.844	ENSDNOG00000010783	-	91	83.537	Dasypus_novemcinctus
ENSFDAG00000014291	NCL	100	72.791	ENSDNOG00000046347	-	99	72.511	Dasypus_novemcinctus
ENSFDAG00000014291	NCL	92	78.241	ENSDORG00000012513	-	90	79.475	Dipodomys_ordii
ENSFDAG00000014291	NCL	52	74.863	ENSDORG00000023596	-	92	71.716	Dipodomys_ordii
ENSFDAG00000014291	NCL	62	59.459	ENSETEG00000008553	-	80	62.632	Echinops_telfairi
ENSFDAG00000014291	NCL	53	88.859	ENSETEG00000014756	-	86	88.918	Echinops_telfairi
ENSFDAG00000014291	NCL	71	65.583	ENSETEG00000008139	-	85	65.405	Echinops_telfairi
ENSFDAG00000014291	NCL	54	88.947	ENSETEG00000018937	-	85	79.608	Echinops_telfairi
ENSFDAG00000014291	NCL	90	82.562	ENSEASG00005008488	NCL	91	85.185	Equus_asinus_asinus
ENSFDAG00000014291	NCL	100	84.401	ENSECAG00000021868	NCL	91	85.410	Equus_caballus
ENSFDAG00000014291	NCL	86	79.146	ENSEEUG00000005913	NCL	85	79.639	Erinaceus_europaeus
ENSFDAG00000014291	NCL	100	86.014	ENSFCAG00000027622	NCL	91	85.954	Felis_catus
ENSFDAG00000014291	NCL	92	85.978	ENSGGOG00000004300	NCL	100	91.857	Gorilla_gorilla
ENSFDAG00000014291	NCL	92	93.374	ENSHGLG00000002031	-	99	93.371	Heterocephalus_glaber_female
ENSFDAG00000014291	NCL	91	83.591	ENSHGLG00000011069	-	91	83.179	Heterocephalus_glaber_female
ENSFDAG00000014291	NCL	75	89.333	ENSHGLG00100000745	-	89	89.130	Heterocephalus_glaber_male
ENSFDAG00000014291	NCL	92	92.758	ENSHGLG00100014537	-	99	92.807	Heterocephalus_glaber_male
ENSFDAG00000014291	NCL	55	82.097	ENSJJAG00000016165	Ncl	93	76.818	Jaculus_jaculus
ENSFDAG00000014291	NCL	92	88.290	ENSMFAG00000040385	NCL	91	88.444	Macaca_fascicularis
ENSFDAG00000014291	NCL	92	88.290	ENSMMUG00000018094	NCL	93	97.857	Macaca_mulatta
ENSFDAG00000014291	NCL	62	91.855	ENSMNEG00000023839	NCL	95	97.857	Macaca_nemestrina
ENSFDAG00000014291	NCL	92	87.809	ENSMLEG00000028935	NCL	91	88.117	Mandrillus_leucophaeus
ENSFDAG00000014291	NCL	92	68.615	ENSMICG00000029975	-	85	77.647	Microcebus_murinus
ENSFDAG00000014291	NCL	100	85.190	ENSMICG00000002538	-	91	83.821	Microcebus_murinus
ENSFDAG00000014291	NCL	92	75.841	MGP_CAROLIEiJ_G0014362	Ncl	91	77.370	Mus_caroli
ENSFDAG00000014291	NCL	92	75.841	ENSMUSG00000026234	Ncl	91	77.982	Mus_musculus
ENSFDAG00000014291	NCL	92	75.762	MGP_PahariEiJ_G0027599	Ncl	91	77.439	Mus_pahari
ENSFDAG00000014291	NCL	92	76.183	MGP_SPRETEiJ_G0015164	Ncl	91	77.863	Mus_spretus
ENSFDAG00000014291	NCL	92	82.389	ENSMLUG00000014547	NCL	91	82.848	Myotis_lucifugus
ENSFDAG00000014291	NCL	92	80.909	ENSNGAG00000002454	-	91	80.880	Nannospalax_galili
ENSFDAG00000014291	NCL	53	73.067	ENSNGAG00000006188	-	54	72.296	Nannospalax_galili
ENSFDAG00000014291	NCL	86	73.406	ENSNLEG00000014107	-	95	73.905	Nomascus_leucogenys
ENSFDAG00000014291	NCL	100	69.162	ENSODEG00000007803	-	90	68.984	Octodon_degus
ENSFDAG00000014291	NCL	62	81.406	ENSODEG00000002441	-	84	68.841	Octodon_degus
ENSFDAG00000014291	NCL	91	85.231	ENSODEG00000003281	-	90	85.714	Octodon_degus
ENSFDAG00000014291	NCL	92	78.241	ENSOCUG00000004312	NCL	99	79.802	Oryctolagus_cuniculus
ENSFDAG00000014291	NCL	92	74.924	ENSOARG00000020709	-	92	78.550	Ovis_aries
ENSFDAG00000014291	NCL	55	76.684	ENSOARG00000004072	-	92	66.502	Ovis_aries
ENSFDAG00000014291	NCL	69	86.986	ENSOARG00000013710	-	94	72.638	Ovis_aries
ENSFDAG00000014291	NCL	75	84.375	ENSOARG00000013270	-	99	87.912	Ovis_aries
ENSFDAG00000014291	NCL	62	91.176	ENSPPAG00000011619	NCL	100	91.857	Pan_paniscus
ENSFDAG00000014291	NCL	100	85.714	ENSPPRG00000012603	NCL	91	85.933	Panthera_pardus
ENSFDAG00000014291	NCL	100	85.574	ENSPTIG00000010393	NCL	91	85.780	Panthera_tigris_altaica
ENSFDAG00000014291	NCL	92	86.769	ENSPTRG00000013025	NCL	100	92.182	Pan_troglodytes
ENSFDAG00000014291	NCL	92	88.290	ENSPANG00000010292	NCL	91	88.444	Papio_anubis
ENSFDAG00000014291	NCL	71	84.980	ENSPPYG00000013265	NCL	91	81.527	Pongo_abelii
ENSFDAG00000014291	NCL	92	85.692	ENSPCOG00000003051	-	90	85.077	Propithecus_coquereli
ENSFDAG00000014291	NCL	91	79.380	ENSPCOG00000004160	-	84	88.095	Propithecus_coquereli
ENSFDAG00000014291	NCL	92	84.074	ENSPVAG00000000297	NCL	91	84.380	Pteropus_vampyrus
ENSFDAG00000014291	NCL	92	77.356	ENSRNOG00000018273	Ncl	91	78.267	Rattus_norvegicus
ENSFDAG00000014291	NCL	66	95.848	ENSRBIG00000035396	-	88	93.960	Rhinopithecus_bieti
ENSFDAG00000014291	NCL	92	82.897	ENSRBIG00000037525	-	90	82.897	Rhinopithecus_bieti
ENSFDAG00000014291	NCL	99	83.882	ENSRROG00000036103	-	98	84.314	Rhinopithecus_roxellana
ENSFDAG00000014291	NCL	92	86.903	ENSRROG00000028756	-	82	97.273	Rhinopithecus_roxellana
ENSFDAG00000014291	NCL	100	78.451	ENSSBOG00000027549	-	96	87.699	Saimiri_boliviensis_boliviensis
ENSFDAG00000014291	NCL	56	74.886	ENSSBOG00000023094	-	84	75.113	Saimiri_boliviensis_boliviensis
ENSFDAG00000014291	NCL	92	84.485	ENSSBOG00000029193	-	99	87.623	Saimiri_boliviensis_boliviensis
ENSFDAG00000014291	NCL	92	82.051	ENSSSCG00000016275	NCL	91	84.314	Sus_scrofa
ENSFDAG00000014291	NCL	88	77.414	ENSTBEG00000001546	-	85	79.378	Tupaia_belangeri
ENSFDAG00000014291	NCL	74	75.366	ENSTBEG00000002469	-	66	80.000	Tupaia_belangeri
ENSFDAG00000014291	NCL	92	81.538	ENSTTRG00000009094	NCL	91	84.284	Tursiops_truncatus
ENSFDAG00000014291	NCL	54	93.668	ENSUAMG00000005639	NCL	87	94.533	Ursus_americanus
ENSFDAG00000014291	NCL	92	83.410	ENSUMAG00000015789	NCL	91	86.022	Ursus_maritimus
ENSFDAG00000014291	NCL	66	80.290	ENSVPAG00000001796	NCL	68	80.435	Vicugna_pacos
ENSFDAG00000014291	NCL	100	83.263	ENSVVUG00000025564	NCL	99	84.107	Vulpes_vulpes